MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-027J07
Chromosome	6 (Build37)
Map Location	31,280,691 - 31,281,741
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Zc3hc1, 2410127E18Rik, 2700094F01Rik, 1700025E21Rik, Cpa2, Cpa4, Cpa5, Cpa1, Tsga14, Mest, Copg2, Copg2, Tsga13, Klf14, LOC100038973, AB041803
Downstream gene	Mkln1, Podxl, EG619959, LOC620104, 1700012A03Rik, Plxna4
Link	Open Mouse BAC browser

no map image available.

Click to get alignment info.

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-027J07.b	B6Ng01-027J07.g
ACC	DH858287	DH858288
length	1,059	1,037
definition	DH858287\|Mus musculus domesticus DNA, BAC clone: B6Ng01-027J07, 5' end.	DH858288\|Mus musculus domesticus DNA, BAC clone: B6Ng01-027J07, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattcttttgtgtttacaaatacattttaagattgctttttctatgtct gttaaggaaggtattggcttttttcttgggattctgctcaaccctgtaga ctactgttaagataatcatgtccactattctcctaatccagggacacagg acgtctttttatcttctagtgactttatcaatttctctcttgaatgtttt aatgttttccaggcctttcacatccctggatagtctagatttagctcaag gacatgagtgtgaactgtgataagactgttcctctaacttctttctcatc atgctactgactttgtagcctgccactctgcttaaagtgtatgtcagctc taagagttttctgtaagttcgtagaatcttatacatagaatcttatcatc tgcataccggtcctatttttatgccttgtatttctctagtcttgaccctc taattaagaatcccagaactatactgaataactgatgaaaacaagcatcc ttatcttctttgattttagtagaaatcctttgagctctgtcccacttagt ataatgttggctatagatttgttatatatagcttttataatgttgagata tgttctttctactcccagttccttgggtgttttgcctgcatgcactgaaa gtattgctggtgccagtgaaggccagaaacaggtgattaaaccccccgga actagagttctagaaggttttgaatttccatgtgggtgctgggaattgaa ctcatatccgccataagtgcagctaacactctgaaccactgaaccctagc ttcagctcccacttcaggacttttatcattttatcacccattgtgacaat catgtggttatggtcatgagtccattcatatagcatattacatttcttga tttctgaatgttgacccctccagtatctctggactaaagccagctgatca attgatgatcctttttatgcgctcctatattcagtttgagtacattgctg agaattttttaaagaattatttattatttctatatattagaggtttattt ttggaattt	gaattcagcccttacctgaatttgcatttggagtctatgtattccgtgtt gtcactcatctcctaaggaggcattcaaatgagtttccctttttaagatt tttttttctcttttttttcccagatgactgtttactgcacaggcccacca gcatatccaaaatgtcttcagtctctctgtctttcaggatgagcccaata ctccctggtagagcctagcatggcagaggccttgggtttgatctccagtg tagacgaatgaaccatttcttcttacccacgtgcagctctgacgactttt ctctttattttcatcagaataagcctgctatgatcagcacactcaacact ctccagcacttccataattatcagacagatggggttataatgttataaaa cagccagcattaaatacaggcaacatgatggtgacagaaaagtagttagc caaggctgaaattaacaacagccaaccaacactgttgctgtctgttgggg ccagggatgctgaaattctatggcttttttttttttctttttttgaaagg tgacaggttgccaagctgccaagaactcctgcctctgctcatactgctct gctgaagtacatttgcgacatcaaccatcaaattacatataaatatgtaa tcaactaaagttatttatagctagctcagtgggtttacgttgacggaatg ggctgaggctgccggtttgatcctttgccacttatttgacacatgaagaa aattcatcacctagtagtctgtccctacactcgaccaggtcacaaagctg tgatcttccagagacctggttctactgtgtagtggacagtcatatcattt tcaggtacaacctcatatggcaatgtaagtactaaccttcaaacataatc agcttggaatcttccatctcaaacctcaattagccttcacaaagagagat gcttagtcatatgtttagaccattttcatatatttatagccacagttggt tccagtgtttccaatgtaaacacttcttaaaaaaaaa
quality values	Open. 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Alignment Information

BAC End 1	BAC End 2
	seq1: chr6_31280691_31281741 seq2: B6Ng01-027J07.g_66_1102 seq1 GAATTCAGCCCTTACCTGAATTTGCATTTGGAGTCTATGTATTCCGTGTT 50 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 GAATTCAGCCCTTACCTGAATTTGCATTTGGAGTCTATGTATTCCGTGTT 50 seq1 GTCACTCATCTCCTAAGGAGGCATTCAAATGAGTTTCCCTTTTTAAGATT 100 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 GTCACTCATCTCCTAAGGAGGCATTCAAATGAGTTTCCCTTTTTAAGATT 100 seq1 TTTTTTTCTCTTTTTTTTCCCAGATGACTGTTTACTGCACAGGCCCACCA 150 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 TTTTTTTCTCTTTTTTTTCCCAGATGACTGTTTACTGCACAGGCCCACCA 150 seq1 GCATATCCAAAATGTCTTCAGTCTCTCTGTCTTTCAGGATGAGCCCAATA 200 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 GCATATCCAAAATGTCTTCAGTCTCTCTGTCTTTCAGGATGAGCCCAATA 200 seq1 CTCCCTGGTAGAGCCTAGCATGGCAGAGGCCTTGGGTTTGATCTCCAGTG 250 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 CTCCCTGGTAGAGCCTAGCATGGCAGAGGCCTTGGGTTTGATCTCCAGTG 250 seq1 TAGACGAATGAACCATTTCTTCTTACCCACGTGCAGCTCTGACGACTTTT 300 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 TAGACGAATGAACCATTTCTTCTTACCCACGTGCAGCTCTGACGACTTTT 300 seq1 CTCTTTATTTTCATCAGAATAAGCCTGCTATGATCAGCACACTCAACACT 350 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 CTCTTTATTTTCATCAGAATAAGCCTGCTATGATCAGCACACTCAACACT 350 seq1 CTCCAGCACTTCCATAATTATCAGACAGATGGGGTTATAATGTTATAAAA 400 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 CTCCAGCACTTCCATAATTATCAGACAGATGGGGTTATAATGTTATAAAA 400 seq1 CAGCCAGCATTAAATACAGGCAACATGATGGTGACAGAAAAGTAGTTAGC 450 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 CAGCCAGCATTAAATACAGGCAACATGATGGTGACAGAAAAGTAGTTAGC 450 seq1 CAAGGCTGAAATTAACAACAGCCAACCAACACTGTTGCTGTCTGTTGGGG 500 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 CAAGGCTGAAATTAACAACAGCCAACCAACACTGTTGCTGTCTGTTGGGG 500 seq1 CCAGGGATGCTGAAATTCTATGGCTTTTTTTTTTTTCTTTTTTTGAAAGG 550 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 CCAGGGATGCTGAAATTCTATGGCTTTTTTTTTTTTCTTTTTTTGAAAGG 550 seq1 TGACAGGTTGCCAAGCTGCCAAGAACTCCTGCCTCTGCTCATACTGCTCT 600 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 TGACAGGTTGCCAAGCTGCCAAGAACTCCTGCCTCTGCTCATACTGCTCT 600 seq1 GCTGAAGTACATTTGCGACATCAACCATCAAATTACATATAAATATGTAA 650 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 GCTGAAGTACATTTGCGACATCAACCATCAAATTACATATAAATATGTAA 650 seq1 TCAACTAAAGTTATTTATAGCTAGCTCAGTGGGTTTACGTTGACGGAATG 700 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 TCAACTAAAGTTATTTATAGCTAGCTCAGTGGGTTTACGTTGACGGAATG 700 seq1 GGCTGAGGCTGCCGGTTTGATCCTTTGCCACTTATTTGACACATGAAGAA 750 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 GGCTGAGGCTGCCGGTTTGATCCTTTGCCACTTATTTGACACATGAAGAA 750 seq1 AATTCATCACCTAGTAGTCTGTCCCTACACTCGACCAGGTCACAAAGCTG 800 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 AATTCATCACCTAGTAGTCTGTCCCTACACTCGACCAGGTCACAAAGCTG 800 seq1 TGATCTTCCAGAGACCTGGTTCTACTGTGTAGGTGGACAGTCATATCA-T 849 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| \| seq2 TGATCTTCCAGAGACCTGGTTCTACTGTGTA-GTGGACAGTCATATCATT 849 seq1 TTCAGGTACAACCTCATATGGCAATGTAAGTACTAACCTTCAAAACAATA 899 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| \|\|\| seq2 TTCAGGTACAACCTCATATGGCAATGTAAGTACTAACCTTCAAA--CATA 897 seq1 ATCAGCCTTGGAATCTTCCATCTCAAAACCTCAATTAGCCATTCACAAAG 949 \|\|\|\|\| \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| \|\|\|\|\|\|\|\|\|\|\|\|\|\|\| \|\|\|\|\|\|\|\| seq2 ATCAG-CTTGGAATCTTCCATCTC-AAACCTCAATTAGCC-TTCACAAA- 943 seq1 GAGAAGATGCCTTAGTCATATGTTTAGAACCATTTTCAATATATTTATAA 999 \|\|\| \|\|\|\|\| \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| \|\|\|\|\|\|\|\|\| \|\|\|\|\|\|\|\|\|\|\| seq2 GAG-AGATG-CTTAGTCATATGTTTAG-ACCATTTTC-ATATATTTATAG 989 seq1 GCACAGGTTGGATCACAGTGTTCTCAAATGTAAAACACTTCTTTAAAAAA 1049 \|\|\|\| \|\|\|\|\| \|\| \|\|\|\|\|\|\| \|\| \|\|\|\|\| \|\|\|\|\|\|\|\|\|\|\| \|\|\|\|\|\| seq2 CCACA-GTTGGTTC-CAGTGTT-TCCAATGT-AAACACTTCTTAAAAAAA 1035 seq1 AA 1051 \|\| seq2 AA 1037

BAC End 1

BAC End 2

seq1: chr6_31280691_31281741
seq2: B6Ng01-027J07.g_66_1102

seq1  GAATTCAGCCCTTACCTGAATTTGCATTTGGAGTCTATGTATTCCGTGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCCCTTACCTGAATTTGCATTTGGAGTCTATGTATTCCGTGTT  50

seq1  GTCACTCATCTCCTAAGGAGGCATTCAAATGAGTTTCCCTTTTTAAGATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACTCATCTCCTAAGGAGGCATTCAAATGAGTTTCCCTTTTTAAGATT  100

seq1  TTTTTTTCTCTTTTTTTTCCCAGATGACTGTTTACTGCACAGGCCCACCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTCTCTTTTTTTTCCCAGATGACTGTTTACTGCACAGGCCCACCA  150

seq1  GCATATCCAAAATGTCTTCAGTCTCTCTGTCTTTCAGGATGAGCCCAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATCCAAAATGTCTTCAGTCTCTCTGTCTTTCAGGATGAGCCCAATA  200

seq1  CTCCCTGGTAGAGCCTAGCATGGCAGAGGCCTTGGGTTTGATCTCCAGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTGGTAGAGCCTAGCATGGCAGAGGCCTTGGGTTTGATCTCCAGTG  250

seq1  TAGACGAATGAACCATTTCTTCTTACCCACGTGCAGCTCTGACGACTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACGAATGAACCATTTCTTCTTACCCACGTGCAGCTCTGACGACTTTT  300

seq1  CTCTTTATTTTCATCAGAATAAGCCTGCTATGATCAGCACACTCAACACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTATTTTCATCAGAATAAGCCTGCTATGATCAGCACACTCAACACT  350

seq1  CTCCAGCACTTCCATAATTATCAGACAGATGGGGTTATAATGTTATAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGCACTTCCATAATTATCAGACAGATGGGGTTATAATGTTATAAAA  400

seq1  CAGCCAGCATTAAATACAGGCAACATGATGGTGACAGAAAAGTAGTTAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAGCATTAAATACAGGCAACATGATGGTGACAGAAAAGTAGTTAGC  450

seq1  CAAGGCTGAAATTAACAACAGCCAACCAACACTGTTGCTGTCTGTTGGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCTGAAATTAACAACAGCCAACCAACACTGTTGCTGTCTGTTGGGG  500

seq1  CCAGGGATGCTGAAATTCTATGGCTTTTTTTTTTTTCTTTTTTTGAAAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGATGCTGAAATTCTATGGCTTTTTTTTTTTTCTTTTTTTGAAAGG  550

seq1  TGACAGGTTGCCAAGCTGCCAAGAACTCCTGCCTCTGCTCATACTGCTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGGTTGCCAAGCTGCCAAGAACTCCTGCCTCTGCTCATACTGCTCT  600

seq1  GCTGAAGTACATTTGCGACATCAACCATCAAATTACATATAAATATGTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAAGTACATTTGCGACATCAACCATCAAATTACATATAAATATGTAA  650

seq1  TCAACTAAAGTTATTTATAGCTAGCTCAGTGGGTTTACGTTGACGGAATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTAAAGTTATTTATAGCTAGCTCAGTGGGTTTACGTTGACGGAATG  700

seq1  GGCTGAGGCTGCCGGTTTGATCCTTTGCCACTTATTTGACACATGAAGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGAGGCTGCCGGTTTGATCCTTTGCCACTTATTTGACACATGAAGAA  750

seq1  AATTCATCACCTAGTAGTCTGTCCCTACACTCGACCAGGTCACAAAGCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCATCACCTAGTAGTCTGTCCCTACACTCGACCAGGTCACAAAGCTG  800

seq1  TGATCTTCCAGAGACCTGGTTCTACTGTGTAGGTGGACAGTCATATCA-T  849
      ||||||||||||||||||||||||||||||| |||||||||||||||| |
seq2  TGATCTTCCAGAGACCTGGTTCTACTGTGTA-GTGGACAGTCATATCATT  849

seq1  TTCAGGTACAACCTCATATGGCAATGTAAGTACTAACCTTCAAAACAATA  899
      ||||||||||||||||||||||||||||||||||||||||||||   |||
seq2  TTCAGGTACAACCTCATATGGCAATGTAAGTACTAACCTTCAAA--CATA  897

seq1  ATCAGCCTTGGAATCTTCCATCTCAAAACCTCAATTAGCCATTCACAAAG  949
      ||||| |||||||||||||||||| ||||||||||||||| |||||||| 
seq2  ATCAG-CTTGGAATCTTCCATCTC-AAACCTCAATTAGCC-TTCACAAA-  943

seq1  GAGAAGATGCCTTAGTCATATGTTTAGAACCATTTTCAATATATTTATAA  999
      ||| ||||| ||||||||||||||||| ||||||||| ||||||||||| 
seq2  GAG-AGATG-CTTAGTCATATGTTTAG-ACCATTTTC-ATATATTTATAG  989

seq1  GCACAGGTTGGATCACAGTGTTCTCAAATGTAAAACACTTCTTTAAAAAA  1049
       |||| ||||| || ||||||| || ||||| ||||||||||| ||||||
seq2  CCACA-GTTGGTTC-CAGTGTT-TCCAATGT-AAACACTTCTTAAAAAAA  1035

seq1  AA  1051
      ||
seq2  AA  1037

BAC Information

Search Parameter

Search Result

BAC

no map image available.

BAC End Information

Alignment Information