BAC Information

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BAC

Clone NameB6Ng01-028E03
Chromosome6 (Build37)
Map Location 24,218,719 - 24,219,596
singlet/doubletsinglet
Overlap genenone
Upstream geneCadps2, Rnf133, Rnf148, Tas2r118, LOC100041082, Slc13a1
Downstream geneLOC100041094, Iqub, Ndufa5, Asb15, EG626715, Lmod2, Wasl, 4932701A20Rik, Hyal4, Spam1, Hyal5, 6332401O19Rik, LOC384358
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-028E03.bB6Ng01-028E03.g
ACCDH858786DH858787
length1,0371,157
definitionDH858786|Mus musculus domesticus DNA, BAC clone: B6Ng01-028E03, 5' end.DH858787|Mus musculus domesticus DNA, BAC clone: B6Ng01-028E03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctataacattgagtttggcatctttctttcatctgtgcatgtgta
ttcgcttctaaaaagtcatgataaaaatgagtatataatcttttatatac
agatagtgaatatttaatatatttatgagtatatataatgaatacataaa
tgaacaattatatatattcaaacatatgctcatataaataaataaaatca
tagtaaaattaacctgtaatgtttcatatatacatacatgacagttttct
aaaatcacaatgaaagaaaaaagtttctttaatattttccatttattttt
tgaaaaattgattcattttaattatatggatctgctattacctccctctc
tccctccctccctcccacaactcttagtacctaactgcccatctccctcc
caaattccctccttcctttttgttttaaatcaataacctctgagtccaat
taatgctactcatatgcacaaggatataggaccatccactgatgaatggg
ctccccaccagtagccacatcatcaggggagtaactctctcccttggcag
tcaccaatggccattagcacctctaccaagggttgggccagtgacatccc
ttcccagcgaatgctgaaattctcatcggtttgatcttgtgtaggtcttg
tgtgcaggtgaccacagctgttgtgtattgatgaatgccacagtcccatt
atatctggaagtttggatttatttcccagctttcctccctgtcctctagc
tagtgcatttttttctgttctctcctacatcatttcctgagctttagatg
aggataggttagtatagatgagtcacctacaactgaacactcagtgttat
atatgctagtatattgactcatataagtttctcccatagaaaacaagagg
cctccctgaccaaagctgaaagtaatacaaatgtgagttgacacatcaat
ccttagatagcaagttgagagtatgatatttagcaaaacaacacgttagg
ttacttctagggctaccatcttctcagtcagaacatt
gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatatagtggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctactgggtcaggatggatgattgct
ttaatgtgtttttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctatcttgtgaaaaagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactatttataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcagttctgattttgttaat
taggattttgtctctgtgccctctagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggctaattctttga
atagttcttcttgtttccacttggttgatgtcacccctgagtttgattat
ttcctgccgtctactcctcttgggtgaatttgcttccttttttctagagc
ttttagatgtgttgtgaagctgctagtatgtgctcttctcccgtttctct
tggaggacatcagagctatgagtttccctcttagaatgcttcattgggcc
caaaggtttgggtacgtgtggctccttttctataaatccaaaaagcttaa
tctccttattctctcctgaccagggtacatgagagaggttgtcggttcca
gcggagggtggcttcgttatatttttgattagaaagacgctcacgctggg
acggcga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_24218719_24219596
seq2: B6Ng01-028E03.b_42_918

seq1  GAATTCTATAACATTGAGTTTGGCATCTTTCTTTCATCTGTGCATGTGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATAACATTGAGTTTGGCATCTTTCTTTCATCTGTGCATGTGTA  50

seq1  TTCGCTTCTAAAAAGTCATGATAAAAATGAGTATATAATCTTTTATATAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGCTTCTAAAAAGTCATGATAAAAATGAGTATATAATCTTTTATATAC  100

seq1  AGATAGTGAATATTTAATATATTTATGAGTATATATAATGAATACATAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGTGAATATTTAATATATTTATGAGTATATATAATGAATACATAAA  150

seq1  TGAACAATTATATATATTCAAACATATGCTCATATAAATAAATAAAATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACAATTATATATATTCAAACATATGCTCATATAAATAAATAAAATCA  200

seq1  TAGTAAAATTAACCTGTAATGTTTCATATATACATACATGACAGTTTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAAAATTAACCTGTAATGTTTCATATATACATACATGACAGTTTTCT  250

seq1  AAAATCACAATGAAAGAAAAAAGTTTCTTTAATATTTTCCATTTATTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCACAATGAAAGAAAAAAGTTTCTTTAATATTTTCCATTTATTTTT  300

seq1  TGAAAAATTGATTCATTTTAATTATATGGATCTGCTATTACCTCCCTCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAATTGATTCATTTTAATTATATGGATCTGCTATTACCTCCCTCTC  350

seq1  TCCCTCCCTCCCTCCCACAACTCTTAGTACCTAACTGCCCATCTCCCTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCCCTCCCTCCCACAACTCTTAGTACCTAACTGCCCATCTCCCTCC  400

seq1  CAAATTCCCTCCTTCCTTTTTGTTTTAAATCAATAACCTCTGAGTCCAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTCCCTCCTTCCTTTTTGTTTTAAATCAATAACCTCTGAGTCCAAT  450

seq1  TAATGCTACTCATATGCACAAGGATATAGGACCATCCACTGATGAATGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGCTACTCATATGCACAAGGATATAGGACCATCCACTGATGAATGGG  500

seq1  CTCCCCACCAGTAGCCACATCATCAGGGGAGTAACTCTCTCCCTTGGCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCACCAGTAGCCACATCATCAGGGGAGTAACTCTCTCCCTTGGCAG  550

seq1  TCACCAATGGCCATTAGCACCTCTACCAAGGGTTGGGCCAGTGACATCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCAATGGCCATTAGCACCTCTACCAAGGGTTGGGCCAGTGACATCCC  600

seq1  TTCCCAGCGAATGCTGAAATTCTCATCGGTTTGATCTTGTGTAGGTCTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCAGCGAATGCTGAAATTCTCATCGGTTTGATCTTGTGTAGGTCTTG  650

seq1  TGTGCAGGTGACCACAGCTGTTGTGTATTGATGAATGCCACAGTCCCATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCAGGTGACCACAGCTGTTGTGTATTGATGAATGCCACAGTCCCATT  700

seq1  ATATCTGGAAGTTTGGATTTATTTCCCAGCTTTCCTCCCTGTCCTCTAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTGGAAGTTTGGATTTATTTCCCAGCTTTCCTCCCTGTCCTCTAGC  750

seq1  TAGTGCATTTTTTTCTGTTCTCTCCTACATCATTTCCTGAGCTTTAGATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGCATTTTTTTCTGTTCTCTCCTACATCATTTCCTGAGCTTTAGATG  800

seq1  AGGATAGGTTAGTATAGATGAGTCACCTACAACTGAACACTCAGTGTTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATAGGTTAGTATAGATGAGTCACCTACAACTGAACACTCAGTGTTAT  850

seq1  ATATGCTAGGTATATTGACTCATATAAG  878
      |||||||| |||||||||||||||||||
seq2  ATATGCTA-GTATATTGACTCATATAAG  877