BAC Information

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BAC

Clone NameB6Ng01-028N16
Chromosome6 (Build37)12 (Build37)
Map Location 18,835,452 - 18,835,96851,391,106 - 51,391,633
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-028N16.bB6Ng01-028N16.g
ACCDH859222DH859223
length1,013942
definitionDH859222|Mus musculus domesticus DNA, BAC clone: B6Ng01-028N16, 5' end.DH859223|Mus musculus domesticus DNA, BAC clone: B6Ng01-028N16, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,452 - 18,835,968)(51,391,106 - 51,391,633)
sequence
gaattctttgttcagttctgagccccattttttaatggggttgtttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ctttgtcttattgactgtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttctttga
tccatttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccatttgttgaaaat
gctgtctttcttccactggatggttttagctcccttgttgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttaccacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatattgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagacttgaagtttttatcata
cagatctttcacttccttagttagagtcacgccgagatattttatattat
ttgtgactattgagaaggtgttgtttccctaatttcttctcagcctgttt
attcttgtgtaga
gaattcagtggtaggttaaatttacccttccctacgagaggtgacgttat
tatgttcagatgtaaattatctgcttcttagttttcatgttttaaatatg
aaaattattttaatcacaatttgttcatagaattgtaaacttactgttaa
aatttaaatagtatctaatattatattagcttcaataagcataaaatgtt
ataatatcacacgaatattacaagtaataactattcatatgatatcattt
taataaattagtttttgaatttaagaattatttgatgtgtaaccatagat
ttaacataagtctgagttttttaaaatcaattttctacagttcacttata
aactaccaaatgactaaggaaatttgatttaaagtggcatttggctcgat
aaattttacatttaattaaaaattttcaaccagttctaaattaattcttc
agtttagattcttaaattaacatataataattgatactttattgttttat
gttatttaactatgtatacccattatttatttttatgcttagtcattttt
attggatattttatctatttactttcaaatgttatcctctttcccgatat
cccctctagaacctccctatcccatccctccttttcctgtttctatgaaa
gtgtgcccccacccacccactcctgcctccccaccctcgaattctcctac
aatggggcatcaagccttcacaggaccttgggcccctcctaccattgatg
ccccgacaaggccatcttctgctacatatatggctagagccatgtccctc
catgtgtactccttggttggtagtgtagaccctgagagctctggttggtt
gatattgttgttctttctatggggttgctactttagtctttctctaactc
ctccattggggaccctgtgatcagttcatagttggctgcagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835452_18835968
seq2: B6Ng01-028N16.b_46_563 (reverse)

seq1  ACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATC  50
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  ACCCACACACCTATGGTCACTTGATCTTCAACAAGGGAGCTAAAACCATC  50

seq1  CAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTT  100
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CAGTGGAAGAAAGACAGCATTTTCAACAAATGGTGCTGGCACAACTGGTT  100

seq1  GTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCTCCATGTACTA  150
      |||||| |||||||||||| |||||||||||||||||||||| |||||||
seq2  GTTATCATGTAGAAGAATGCGAATCGATCCATACTTATCTCCTTGTACTA  150

seq1  AGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTG  200
      ||||||||||||| |||||||| |||||||||||||||||||||||||||
seq2  AGGTCAAATCTAAATGGATCAAAGAACTTCACATAAAACCAGAGACACTG  200

seq1  AAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCAGAGG  250
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGG  250

seq1  GGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTGAGGTAGAGAA  299
      |||||| ||||||||||||||||||||||| |||||||| || | |||||
seq2  GGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAA  300

seq1  TCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGAC  349
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGAC  350

seq1  ACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTAC  399
      || |||||||||||||| ||||||||||||||||||||||||||||||||
seq2  ACAGTCAATAAGACAAAGAGACCACCAACAGATTGGGAAAGGATCTTTAC  400

seq1  CTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCA  450

seq1  AGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAAATGGGGCTCA  499
      ||||||||||||||||||||||||| ||||||||||| ||||||||||||
seq2  AGAAGGTGGACTTCAGAAAATCAAACAACCCCATTAAAAAATGGGGCTCA  500

seq1  GAACTGAACAAAGAATTC  517
      ||||||||||||||||||
seq2  GAACTGAACAAAGAATTC  518

seq1: chr12_51391106_51391633
seq2: B6Ng01-028N16.g_65_592 (reverse)

seq1  AAATAATGGGTATACATAGTTAAATAACATAAAACAATAAAGTATCAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATGGGTATACATAGTTAAATAACATAAAACAATAAAGTATCAATT  50

seq1  ATTATATGTTAATTTAAGAATCTAAACTGAAGAATTAATTTAGAACTGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATATGTTAATTTAAGAATCTAAACTGAAGAATTAATTTAGAACTGGT  100

seq1  TGAAAATTTTTAATTAAATGTAAAATTTATCGAGCCAAATGCCACTTTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAATTTTTAATTAAATGTAAAATTTATCGAGCCAAATGCCACTTTAA  150

seq1  ATCAAATTTCCTTAGTCATTTGGTAGTTTATAAGTGAACTGTAGAAAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAATTTCCTTAGTCATTTGGTAGTTTATAAGTGAACTGTAGAAAATT  200

seq1  GATTTTAAAAAACTCAGACTTATGTTAAATCTATGGTTACACATCAAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTAAAAAACTCAGACTTATGTTAAATCTATGGTTACACATCAAATA  250

seq1  ATTCTTAAATTCAAAAACTAATTTATTAAAATGATATCATATGAATAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTAAATTCAAAAACTAATTTATTAAAATGATATCATATGAATAGTT  300

seq1  ATTACTTGTAATATTCGTGTGATATTATAACATTTTATGCTTATTGAAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTTGTAATATTCGTGTGATATTATAACATTTTATGCTTATTGAAGC  350

seq1  TAATATAATATTAGATACTATTTAAATTTTAACAGTAAGTTTACAATTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATAATATTAGATACTATTTAAATTTTAACAGTAAGTTTACAATTCT  400

seq1  ATGAACAAATTGTGATTAAAATAATTTTCATATTTAAAACATGAAAACTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACAAATTGTGATTAAAATAATTTTCATATTTAAAACATGAAAACTA  450

seq1  AGAAGCAGATAATTTACATCTGAACATAATAACGTCACCTCTCGTAGGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCAGATAATTTACATCTGAACATAATAACGTCACCTCTCGTAGGGA  500

seq1  AGGGTAAATTTAACCTACCACTGAATTC  528
      ||||||||||||||||||||||||||||
seq2  AGGGTAAATTTAACCTACCACTGAATTC  528