BAC Information

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BAC

Clone NameB6Ng01-031K06
Chromosome6 (Build37)10 (Build37)
Map Location 18,835,443 - 18,835,968123,236,212 - 123,236,747
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-031K06.bB6Ng01-031K06.g
ACCDH861196DH861197
length1,002530
definitionDH861196|Mus musculus domesticus DNA, BAC clone: B6Ng01-031K06, 5' end.DH861197|Mus musculus domesticus DNA, BAC clone: B6Ng01-031K06, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,443 - 18,835,968)(123,236,212 - 123,236,747)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
tttctgaaatccaccttcttgagttctttatatatgttggatattagtcc
cctatctgatttaggataggtaaagatcctttcccaatctgttggtggtc
tctttgtcttattgacggtgtcttttgccttgcagaaactttggagtttc
attaggtcccatttgtcaattctcgatcttacagcacaagccattgctgt
tctgttcaggaatttttcccctgtgcccatatcttcaaggcttttcccca
ctttctcctctataagtttcagtgtctctggttttatgtgaagttctttg
atccatttagatttgaccttagtgcaaggagataagtatggatcaattcg
cattcttctacatgataacaaccagttgtgccagcaccaattgttgaaaa
tgctgtctttcttccactggatggttttagctcccttgtcgaagatcaag
tgaccataggtgtgtgggttcatttctgggtcttcaattctattccattg
gtctacttgtctgtctctataccagtaccatgcagtttttaccacaattg
ctctgtagtaaagcttatacagaaaatgtggtacatctacacaatggagt
actactcagctattaaaaagaatgaatttatgaaattcctagccaaatgg
atggacctggagggcatcatcctgagtgaggtaacacattcacaaaggaa
ctcacacaatatgtagtcactgataagtggatattagcccaaaacctagg
atacccaagatataagatacaatttcctaaacacatgaaactcaagaaaa
atgaagactgaagtgtggacactatacccctccttagaagtgggaacaaa
acacccttggaagagtacagagacaaagtttggagctgagatgaaagatg
gaccatgtagagactgccttatccaggatcacccataatcagcatcaaac
gc
atttgtagtccatttgtttgcaaggttttttaaaagctctctacttatag
ggcacccagaatcactaggtgggaatgttcattcaaaaaaatggctagac
agcatctgagagaagctagcctagcactgtgttctcaggcttacaggaga
ggctactgttacagaggtggtcacttcaggaccctcactgggtgaggggg
gagatgtaattggtaatgcagccatgttggctcatttgcatctcaactct
ccagattggtggcttaagttaatttattctgaacaagtttagttctctag
gcagacaggttgatatattgcatttcattattttttgagaatcacatatt
ctccctgaaaggggagaagaaattgggtgcctagctcatctgagctgtta
ccttctgcttgccgacttcttggatgtagcctatgaatacttatgtccat
gtgagagagattatgaaaatatctgcccgtgaattaaggcatcaggctct
gagtctgagtgaagactttggaaacagaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835443_18835968
seq2: B6Ng01-031K06.b_42_569 (reverse)

seq1  CAGAGATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCT  50
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCT  50

seq1  AAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCA  100

seq1  CAACTGGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCTC  150
      ||||||||||||||| |||||||||||| |||| ||||||||||||||||
seq2  CAACTGGTTGTTATCATGTAGAAGAATGCGAATTGATCCATACTTATCTC  150

seq1  CATGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCA  200
      | || ||||||||||||||||| |||||||| ||||||||||||||||||
seq2  CTTGCACTAAGGTCAAATCTAAATGGATCAAAGAACTTCACATAAAACCA  200

seq1  GAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATAT  250

seq1  GGGCAGAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTGA  299
      ||||| ||||||||| ||||||||||||||||||||||| |||||||| |
seq2  GGGCACAGGGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAA  300

seq1  GGTAGAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAG  349
      | | |||||| |||||||||||||||||||||||||||||||||||||||
seq2  GATCGAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAG  350

seq1  GCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAG  399
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GCAAAAGACACCGTCAATAAGACAAAGAGACCACCAACAGATTGGGAAAG  400

seq1  GATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATATA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATATA  450

seq1  AAGAACTCAAGAAGGTGGACTTCAG-AAAATCAAATAACCCCATTAATAA  498
      ||||||||||||||||||| ||||| ||||||||||||||||||||| ||
seq2  AAGAACTCAAGAAGGTGGATTTCAGAAAAATCAAATAACCCCATTAAAAA  500

seq1  ATGGGGCTCAGAACTGAACAAAGAATTC  526
      ||||||||||||||||||||||||||||
seq2  ATGGGGCTCAGAACTGAACAAAGAATTC  528

seq1: chr10_123236212_123236747
seq2: B6Ng01-031K06.g_66_601

seq1  GAATTCATTTGTAGTCCATTTGTTTGCAAGGTTTTTTAAAAGCTCTCTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTGTAGTCCATTTGTTTGCAAGGTTTTTTAAAAGCTCTCTAC  50

seq1  TTATAGGGCACCCAGAATCACTAGGTGGGAATGTTCATTCAAAAAAATGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGGGCACCCAGAATCACTAGGTGGGAATGTTCATTCAAAAAAATGG  100

seq1  CTAGACAGCATCTGAGAGAAGCTAGCCTAGCACTGTGTTCTCAGGCTTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGACAGCATCTGAGAGAAGCTAGCCTAGCACTGTGTTCTCAGGCTTAC  150

seq1  AGGAGAGGCTACTGTTACAGAGGTGGTCACTTCAGGACCCTCACTGGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAGGCTACTGTTACAGAGGTGGTCACTTCAGGACCCTCACTGGGTG  200

seq1  AGGGGGGAGATGTAATTGGTAATGCAGCCATGTTGGCTCATTTGCATCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGGGAGATGTAATTGGTAATGCAGCCATGTTGGCTCATTTGCATCTC  250

seq1  AACTCTCCAGATTGGTGGCTTAAGTTAATTTATTCTGAACAAGTTTAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTCCAGATTGGTGGCTTAAGTTAATTTATTCTGAACAAGTTTAGTT  300

seq1  CTCTAGGCAGACAGGTTGATATATTGCATTTCATTATTTTTTGAGAATCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGGCAGACAGGTTGATATATTGCATTTCATTATTTTTTGAGAATCA  350

seq1  CATATTCTCCCTGAAAGGGGAGAAGAAATTGGGTGCCTAGCTCATCTGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTCTCCCTGAAAGGGGAGAAGAAATTGGGTGCCTAGCTCATCTGAG  400

seq1  CTGTTACCTTCTGCTTGCCGACTTCTTGGATGTAGCCTATGAATACTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTACCTTCTGCTTGCCGACTTCTTGGATGTAGCCTATGAATACTTAT  450

seq1  GTCCATGTGAGAGAGATTATGAAAATATCTGCCCGTGAATTAAGGCAGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GTCCATGTGAGAGAGATTATGAAAATATCTGCCCGTGAATTAAGGCATCA  500

seq1  GGCTCTGAGTCTGAGTGAAGACTTTGGAAACAGACA  536
      ||||||||||||||||||||||||||||||||||||
seq2  GGCTCTGAGTCTGAGTGAAGACTTTGGAAACAGACA  536