BAC Information

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BAC

Clone NameB6Ng01-032F03
Chromosome6 (Build37)1 (Build37)
Map Location 18,835,452 - 18,835,96850,831,935 - 50,832,095
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032F03.bB6Ng01-032F03.g
ACCDH861693DH861694
length948790
definitionDH861693|Mus musculus domesticus DNA, BAC clone: B6Ng01-032F03, 5' end.DH861694|Mus musculus domesticus DNA, BAC clone: B6Ng01-032F03, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,452 - 18,835,968)(50,831,935 - 50,832,095)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaagctttggagtttca
tgaggtcccatttgtcaattttcaatcttacagaacaagccattgctgtt
ctattcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggtttcatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataggtatggatcgattcgc
attcttctacatgatagcaaccagttgtgccagcaccaattgttgaagat
gctgtctgtcttacactggatggttttaggtcccttgttgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtcagtataccagtaccatgcagtttttatcacaattac
tctgtagtaaagctttaggtcaggcagggtgattccaccagaggttcttt
tagccttgagaagagtttttgctatcctaggtttttttgttattccagat
gaatttgcagattgctctttctaattcattgaagaattgagttggaattt
tgatggggattacattgaatctgtagattgcttttggcaagatagccatt
tttacaatgttgatcctgccaatccatgagcatgggagatcttttcatct
tctgagatctttaatttctttcttcagagacttgaagttttatcatacag
atctttcactttcttagttagagtcacgccagatattttatattattt
gaattctgtgtttagctctgtaccccaatcttaaattggattatttaatt
ttttggaatttaactacttgagttctttttatattttgtatattagcctt
caaacacatatagagttagtgaagatctttccaaatctgtaggttgccat
tttgtccgattgacagtgttctttgccttatagaagcttttcatttttat
gaggtctcatttgtcaattgttgatcttagaacctgagccattggtgttt
tgttcaggaaattttcccaggtttccatgcatacgaggctatttcccact
ttctcttctattagatccagtttatctggctttatgtggaggttcttgct
ccacttggacttgagctttgtacaagataaatatggatcaatttgcattc
ctctacatccagatcgacagttagaccagcaacatttgtggaagatgctt
ccgtttttcactatatgcttttggtttctttgtcaaagatcatgggtcca
taagtgtgtgggtttaagtcttcaattctattctattgatctattcgttt
ggtaaaaacaaatatcgtggagttttgttgttgttgttgttttatcacta
ctgctctgtggtacagcttgaggtcagggatggtgattccccagaagttc
ttttattgttaagaattgttttttctatcctgggtttttttcttttccct
tatgaacttgagaattgttctttccatgtctgtgaagcattgtgttggaa
ttttgatggggagttcactgaatctgtagattgcttttgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835452_18835968
seq2: B6Ng01-032F03.b_49_566 (reverse)

seq1  ACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATC  50
      ||||||||||||||||||||||||||||| |||||||| |||||||||||
seq2  ACCCACACACCTATGGTCACTTGATCTTCAACAAGGGACCTAAAACCATC  50

seq1  CAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTT  100
      ||||| |||| ||||||||| |||||||||||||||||||||||||||||
seq2  CAGTGTAAGACAGACAGCATCTTCAACAATTGGTGCTGGCACAACTGGTT  100

seq1  GTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCTCCATGTACTA  150
      | |||| |||||||||||| |||||||||||||| ||||||| |||||||
seq2  GCTATCATGTAGAAGAATGCGAATCGATCCATACCTATCTCCTTGTACTA  150

seq1  AGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTG  200
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AGGTCAAATCTAAGTGGATCAAGGAACTTCACATGAAACCAGAGACACTG  200

seq1  AAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCAGAGG  250
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGG  250

seq1  GGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTGAGGTAGAGAA  299
      |||||| |||||||| |||||||||||||| ||| |||| || | || ||
seq2  GGAAAAATTCCTGAATAGAACAGCAATGGCTTGTTCTGTAAGATTGAAAA  300

seq1  TCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGAC  349
      | |||||||||||||| |||||||||||||| ||||||||||||||||||
seq2  TTGACAAATGGGACCTCATGAAACTCCAAAGCTTCTGCAAGGCAAAAGAC  350

seq1  ACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTAC  400

seq1  CTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCA  450

seq1  AGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAAATGGGGCTCA  499
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCA  500

seq1  GAACTGAACAAAGAATTC  517
      ||||||||||||||||||
seq2  GAACTGAACAAAGAATTC  518

seq1: chr1_50831935_50832095
seq2: B6Ng01-032F03.g_696_856 (reverse)

seq1  CCAAAAGCAATCTACAGATTCAATGCAATCCCCATCAAAATTCCAACTCA  50
      |||||||||||||||||||||| || | ||||||||||||||||||| ||
seq2  CCAAAAGCAATCTACAGATTCAGTGAACTCCCCATCAAAATTCCAACACA  50

seq1  ATTCTTCAACAAATTAGAAAGAGCAATCTGCAAATTCAT-CTGGAATAAC  99
      || |||||   |  | |||||| ||||   ||| |||||   |||| |  
seq2  ATGCTTCACAGACATGGAAAGAACAATTCTCAAGTTCATAAGGGAAAAGA  100

seq1  AAAAAACCTAGGATAGCAAAAACTCTTCTCAAGGATAAAAGAACCTCTGG  149
      |||||||| ||||||| ||||||  |||| ||  |||||||||| |||||
seq2  AAAAAACCCAGGATAGAAAAAACAATTCTTAACAATAAAAGAACTTCTGG  150

seq1  TGGAATCACCAT  161
       |||||||||||
seq2  -GGAATCACCAT  161