BAC Information

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BAC

Clone NameB6Ng01-034B14
Chromosome6 (Build37)
Map Location 79,383,832 - 79,384,757
singlet/doubletsinglet
Overlap genenone
Upstream geneReg3g, LOC621716, Ppia-ps6_789.1, LOC384440
Downstream geneLOC621815, LOC100043392, Lrrtm4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034B14.bB6Ng01-034B14.g
ACCDH862958DH862959
length915246
definitionDH862958|Mus musculus domesticus DNA, BAC clone: B6Ng01-034B14, 5' end.DH862959|Mus musculus domesticus DNA, BAC clone: B6Ng01-034B14, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcacattcggtatagctataataaatgcaaaagagtggaaaggt
ctaaggcaaggttgctgtcagaaagagggagaaaaaagaaacgtagattt
acaggtttcaccccaatagagaaacgattcttgtcacccaggctagctga
cacaagcagaaatccaagcgcagtagctgttaatctccctgaacaagatc
cattgtctcgtactcattatcctatgttttagcaggcttttcccaaagct
ggctttctgggtatctggaatacatggatgaagtttacatatttttctcc
tggttgttagcctatgtttaagaaaattattaggtcagattatggaaata
aatctttaataccctggttaagtctcacttatttttcccaaaaagtgaat
cttgctgagttatcctagctgtgtatctccttccaagataaaaaatttta
taaagtaaaagattataaaacccagcatttatcatgtttctatactcgtg
tatgacatcatggtctaaacatgctctgaactgaaagcacagtatggaga
agccagtctcttcatcaggataaacatcaaatgacctttagcatatatag
caatttattagctctgtcttgagaaagtgtggcttggaaaacaatgaaat
ctaaccagatatgcaaatacagagtgtgaataaaatagacaggcatagaa
tggttatttttatatcggtgtgattaacaacaataacttaataaaataac
ctaccttctagatgtcgaaacataaacatactcaacatataccctataat
ctggggccatagcttagacagtattagaaagatacatttggtgtaagaat
tagcttagtagaagaacaaagaatgagctttaaatgatctaatgtgcgag
caccttgactctgag
actcctagtcactcccattatcggggtgtaatagtggggtgatgggcaag
caacgaatcgggagctgtcacgccatatcaggtgctgaaacgtcacactg
cgggttataaaagcagcgccattttcccggtttgggatcttcctgagaag
caagcaataaagctcttgccgcagaagattctggtttgttgcgtctttct
tgccggtagagcgggatgcaatagtgggtgggtaggggattggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_79383832_79384757
seq2: B6Ng01-034B14.b_44_958 (reverse)

seq1  CTCAGAGGTTCAAGGTGCTCCGCACATTAAGATCATTTTAAAAGCTCATT  50
      |||||||  |||||||||| |||||||| |||||||||  ||||||||||
seq2  CTCAGAG--TCAAGGTGCT-CGCACATT-AGATCATTT--AAAGCTCATT  44

seq1  CTTTGTTTCTTCCTACTAAGCTAATTCTTACACCAAATGTTATCTTTTCT  100
      ||||| ||||| ||||||||||||||||||||||||||| |||| |||||
seq2  CTTTG-TTCTT-CTACTAAGCTAATTCTTACACCAAATG-TATC-TTTCT  90

seq1  AATACTGTCTAAGCTATGGCCCCAGATTATAGGGTATATGTTGAGTATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTGTCTAAGCTATGGCCCCAGATTATAGGGTATATGTTGAGTATGT  140

seq1  TTATGTTTTCGACATCTAGAAGGTAGGTTATTTTATTAAGTTATTGTTGT  200
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATG-TTTCGACATCTAGAAGGTAGGTTATTTTATTAAGTTATTGTTGT  189

seq1  TAATCACACCGATATAAAAATAACCATTCTATGCCTGTCTATTTTATTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCACACCGATATAAAAATAACCATTCTATGCCTGTCTATTTTATTCA  239

seq1  CACTCTGTATTTGCATATCTGGTTAGATTTCATTGTTTTCCAAGCCACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTGTATTTGCATATCTGGTTAGATTTCATTGTTTTCCAAGCCACAC  289

seq1  TTTCTCAAGACAGAGCTAATAAATTGCTATATATGCTAAAGGTCATTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCAAGACAGAGCTAATAAATTGCTATATATGCTAAAGGTCATTTGA  339

seq1  TGTTTATCCTGATGAAGAGACTGGCTTCTCCATACTGTGCTTTCAGTTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTATCCTGATGAAGAGACTGGCTTCTCCATACTGTGCTTTCAGTTCA  389

seq1  GAGCATGTTTAGACCATGATGTCATACACGAGTATAGAAACATGATAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATGTTTAGACCATGATGTCATACACGAGTATAGAAACATGATAAAT  439

seq1  GCTGGGTTTTATAATCTTTTACTTTATAAAATTTTTTATCTTGGAAGGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGTTTTATAATCTTTTACTTTATAAAATTTTTTATCTTGGAAGGAG  489

seq1  ATACACAGCTAGGATAACTCAGCAAGATTCACTTTTTGGGAAAAATAAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACAGCTAGGATAACTCAGCAAGATTCACTTTTTGGGAAAAATAAGT  539

seq1  GAGACTTAACCAGGGTATTAAAGATTTATTTCCATAATCTGACCTAATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTTAACCAGGGTATTAAAGATTTATTTCCATAATCTGACCTAATAA  589

seq1  TTTTCTTAAACATAGGCTAACAACCAGGAGAAAAATATGTAAACTTCATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTAAACATAGGCTAACAACCAGGAGAAAAATATGTAAACTTCATC  639

seq1  CATGTATTCCAGATACCCAGAAAGCCAGCTTTGGGAAAAGCCTGCTAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTATTCCAGATACCCAGAAAGCCAGCTTTGGGAAAAGCCTGCTAAAA  689

seq1  CATAGGATAATGAGTACGAGACAATGGATCTTGTTCAGGGAGATTAACAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGGATAATGAGTACGAGACAATGGATCTTGTTCAGGGAGATTAACAG  739

seq1  CTACTGCGCTTGGATTTCTGCTTGTGTCAGCTAGCCTGGGTGACAAGAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGCGCTTGGATTTCTGCTTGTGTCAGCTAGCCTGGGTGACAAGAAT  789

seq1  CGTTTCTCTATTGGGGTGAAACCTGTAAATCTACGTTTCTTTTTTCTCCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTTCTCTATTGGGGTGAAACCTGTAAATCTACGTTTCTTTTTTCTCCC  839

seq1  TCTTTCTGACAGCAACCTTGCCTTAGACCTTTCCACTCTTTTGCATTTAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTGACAGCAACCTTGCCTTAGACCTTTCCACTCTTTTGCATTTAT  889

seq1  TATAGCTATACCGAATGTGAGAATTC  926
      ||||||||||||||||||||||||||
seq2  TATAGCTATACCGAATGTGAGAATTC  915