BAC Information

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BAC

Clone NameB6Ng01-034J16
Chromosome6 (Build37)
Map Location 127,190,136 - 127,313,609
singlet/doubletdoublet
Overlap geneLOC100043578, EG640703
Upstream geneLOC100043565, LOC667427, LOC100043567, Kcna5, Kcna1, Kcna6, LOC667463, Ndufa9, Akap3, Dyrk4, Rad51ap1, D6Wsu163e, LOC667473, LOC624256, Fgf6, Fgf23, 9630033F20Rik, Ccnd2, Tpi-rs11, EG243642
Downstream geneLOC100043848, Parp11, Efcab4b, Prmt8, Tspan11, Tspan9, LOC100043853, LOC667560, Tead4, LOC652986, Tulp3, 5930416I19Rik, Foxm1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034J16.bB6Ng01-034J16.g
ACCDH863307DH863308
length780614
definitionDH863307|Mus musculus domesticus DNA, BAC clone: B6Ng01-034J16, 5' end.DH863308|Mus musculus domesticus DNA, BAC clone: B6Ng01-034J16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(127,190,136 - 127,190,913)(127,312,997 - 127,313,609)
sequence
gaattccattctcagtctataaagcccccacagacatcaaaacgtgcttt
ctttctttctttaaaattgggaagttccttacagctgtcagagtaatgag
tgtcctgtttcccttatgactcctttttaccccctgggctgtcccgttca
gcccactccccacaagccataacaagagtcaccattaaagagttgttagt
ttcagtttctggagggcaaactctgacttccttttacattgttttagttc
attgctacacatgcgaacaatgcaaaagcaggccttcctctaaatctgga
tgaagtaggcaaagccttgcggcactcacagaactgcccacctgggtgcg
tgcggcacagggccgatcgatcttgcctcatggtccgtggaccaccgagc
atcaccctctctgccttgactcccaggcctgctcccctaacctgtaagtg
tgcaaactggctcacctgttggaagaatggagtctgaagatcccacccct
gcccctaccggcagaaaagtgtgctctggggtcccagtttgcagagcgta
gcctagggttgagaagtatctctaagggcagagctctagcatagcaaagg
agccagagggaccagagcaggtaccatctactgagaggtaaggggtagag
tgctggggttaccttttcctcgcccacccagagagaaccagttaccatgt
ccccttttcctttgcagacatgcagactacatgagtcgcaaagaacaaag
gtactgttcggaaggtcatttcccctcccc
gaattctcgatctgggaggtaggcagagactttgcaatctgccggtgatt
ggattagacatggtgtgaaaatcggagcagggctacacggctggggctgg
ggcccaggctactgtgaggccaggctgccaaagccctgctgtggagacca
catcagggatgcctgtccccgccccagcaggccttggagacagcttcgat
gtcacagccctcagaggctcccctacagctcagccctgttgtctccccca
tcccaccacatcttgggagctttctcaggggaagcagaggcccttggccc
tattcactagtctcctttacccttgacctcccagcagtggctcgggcctc
caaggagggagaggcctgtctttcaagtctctggggtctgaacagccctc
tcttgatgtctttctttgtctggctttctctctccttctggcacagtctg
gttccttctaagggattccactctgtctgcatctgctcagggccagagtc
agcctgtgtttcccacctttccagggagttaggggttctgatgagcatct
ctgaggatttccaaactttttccagaactttcatcagactatttttgggg
gggtgggagtggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_127190136_127190913
seq2: B6Ng01-034J16.b_44_823

seq1  GAATTCCATTCTCAGTCTATAAAGCCCCCACAGACATCAAAACGTGCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTCTCAGTCTATAAAGCCCCCACAGACATCAAAACGTGCTTT  50

seq1  CTTTCTTTCTTTAAAATTGGGAAGTTCCTTACAGCTGTCAGAGTAATGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTTCTTTAAAATTGGGAAGTTCCTTACAGCTGTCAGAGTAATGAG  100

seq1  TGTCCTGTTTCCCTTATGACTCCTTTTTACCCCCTGGGCTGTCCCGTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTGTTTCCCTTATGACTCCTTTTTACCCCCTGGGCTGTCCCGTTCA  150

seq1  GCCCACTCCCCACAAGCCATAACAAGAGTCACCATTAAAGAGTTGTTAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCACTCCCCACAAGCCATAACAAGAGTCACCATTAAAGAGTTGTTAGT  200

seq1  TTCAGTTTCTGGAGGGCAAACTCTGACTTCCTTTTACATTGTTTTAGTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTTTCTGGAGGGCAAACTCTGACTTCCTTTTACATTGTTTTAGTTC  250

seq1  ATTGCTACACATGCGAACAATGCAAAAGCAGGCCTTCCTCTAAATCTGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTACACATGCGAACAATGCAAAAGCAGGCCTTCCTCTAAATCTGGA  300

seq1  TGAAGTAGGCAAAGCCTTGCGGCACTCACAGAACTGCCCACCTGGGTGCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTAGGCAAAGCCTTGCGGCACTCACAGAACTGCCCACCTGGGTGCG  350

seq1  TGCGGCACAGGGCCGATCGATCTTGCCTCATGGTCCGTGGACCACCGAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGGCACAGGGCCGATCGATCTTGCCTCATGGTCCGTGGACCACCGAGC  400

seq1  ATCACCCTCTCTGCCTTGACTCCCAGGCCTGCTCCCCTAACCTGTAAGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACCCTCTCTGCCTTGACTCCCAGGCCTGCTCCCCTAACCTGTAAGTG  450

seq1  TGCAAACTGGCTCACCTGTTGGAAGAATGGAGTCTGAAGATCCCACCCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAACTGGCTCACCTGTTGGAAGAATGGAGTCTGAAGATCCCACCCCT  500

seq1  GCCCCTACCGGCAGAAAAGTGTGCTCTGGGGTCCCAGTTTGCAGAGCGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCTACCGGCAGAAAAGTGTGCTCTGGGGTCCCAGTTTGCAGAGCGTA  550

seq1  GCCTAGGGTTGAGAAGTATCTCTAAGGGCAGAGCTCTAGCATAGCAAAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAGGGTTGAGAAGTATCTCTAAGGGCAGAGCTCTAGCATAGCAAAGG  600

seq1  AGCCAGAGGGACCAGAGCAGGTACCATCTACTGAGAGGTAAGGGGTAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGAGGGACCAGAGCAGGTACCATCTACTGAGAGGTAAGGGGTAGAG  650

seq1  TGCTGGGGTTACC-TTTCCTCGCCCACCCAGAGAGAACCAGTTACCATGT  699
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TGCTGGGGTTACCTTTTCCTCGCCCACCCAGAGAGAACCAGTTACCATGT  700

seq1  CCCC-TTTCCCTTGCAGACATGCAGACTACATGAGTCGCAAAGAACAAAG  748
      |||| ||||| |||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTTTCCTTTGCAGACATGCAGACTACATGAGTCGCAAAGAACAAAG  750

seq1  GTACTGTTCGGAAGGTCATTTCCCCTCCCC  778
      ||||||||||||||||||||||||||||||
seq2  GTACTGTTCGGAAGGTCATTTCCCCTCCCC  780

seq1: chr6_127312997_127313609
seq2: B6Ng01-034J16.g_70_683 (reverse)

seq1  TCCCACTCCCACCCCCCC-AAAATAGTCTGATGAAAGTTCTGGAAAAAGT  49
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TCCCACTCCCACCCCCCCAAAAATAGTCTGATGAAAGTTCTGGAAAAAGT  50

seq1  TTGGAAATCCTCAGAGATGCTCATCAGAACCCCTAACTCCCTGGAAAGGT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAATCCTCAGAGATGCTCATCAGAACCCCTAACTCCCTGGAAAGGT  100

seq1  GGGAAACACAGGCTGACTCTGGCCCTGAGCAGATGCAGACAGAGTGGAAT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAACACAGGCTGACTCTGGCCCTGAGCAGATGCAGACAGAGTGGAAT  150

seq1  CCCTTAGAAGGAACCAGACTGTGCCAGAAGGAGAGAGAAAGCCAGACAAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTAGAAGGAACCAGACTGTGCCAGAAGGAGAGAGAAAGCCAGACAAA  200

seq1  GAAAGACATCAAGAGAGGGCTGTTCAGACCCCAGAGACTTGAAAGACAGG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGACATCAAGAGAGGGCTGTTCAGACCCCAGAGACTTGAAAGACAGG  250

seq1  CCTCTCCCTCCTTGGAGGCCCGAGCCACTGCTGGGAGGTCAAGGGTAAAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCCCTCCTTGGAGGCCCGAGCCACTGCTGGGAGGTCAAGGGTAAAG  300

seq1  GAGACTAGTGAATAGGGCCAAGGGCCTCTGCTTCCCCTGAGAAAGCTCCC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTAGTGAATAGGGCCAAGGGCCTCTGCTTCCCCTGAGAAAGCTCCC  350

seq1  AAGATGTGGTGGGATGGGGGAGACAACAGGGCTGAGCTGTAGGGGAGCCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGTGGTGGGATGGGGGAGACAACAGGGCTGAGCTGTAGGGGAGCCT  400

seq1  CTGAGGGCTGTGACATCGAAGCTGTCTCCAAGGCCTGCTGGGGCGGGGAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGGCTGTGACATCGAAGCTGTCTCCAAGGCCTGCTGGGGCGGGGAC  450

seq1  AGGCATCCCTGATGTGGTCTCCACAGCAGGGCTTTGGCAGCCTGGCCTCA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATCCCTGATGTGGTCTCCACAGCAGGGCTTTGGCAGCCTGGCCTCA  500

seq1  CAGTAGCCTGGGCCCCAGCCCCAGCCGTGTAGCCCTGCTCCGATTTTCAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGCCTGGGCCCCAGCCCCAGCCGTGTAGCCCTGCTCCGATTTTCAC  550

seq1  ACCATGTCTAATCCAATCACCGGCAGATTGCAAAGTCTCTGCCTACCTCC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGTCTAATCCAATCACCGGCAGATTGCAAAGTCTCTGCCTACCTCC  600

seq1  CAGATCGAGAATTC  613
      ||||||||||||||
seq2  CAGATCGAGAATTC  614