BAC Information

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BAC

Clone NameB6Ng01-035B22
Chromosome6 (Build37)
Map Location 62,181,145 - 62,182,237
singlet/doubletsinglet
Overlap geneC130092O11Rik
Upstream geneLOC100041764, LOC100042694
Downstream geneGA_x5J8B7W6GG0-4757855-4757501, LOC667099
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-035B22.bB6Ng01-035B22.g
ACCDH863677DH863678
length1,046707
definitionDH863677|Mus musculus domesticus DNA, BAC clone: B6Ng01-035B22, 5' end.DH863678|Mus musculus domesticus DNA, BAC clone: B6Ng01-035B22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtgaataaataaccatgtgggtggctatcttataatatctttc
cctaagggttaagttgtcaagattcatcttgctccctacaagattcatct
tgttcttatggaacattctctagcaactctaccttaagttggtcaccatc
ttctctgatctttctcatacacaacagccttcggaaattctgtatcatct
tggcttatttgtgatagttaatcatcctactacacagtactaaatgataa
ccttttgttctcatattttttatcatgcatttttagaggtacagttaggg
gcattggcatttatcatgctttcattgattgaatcctttattcttagttt
tcaaaatgatttaaattaacaagtgatgttggctaccagaaatggtcaag
aattttgagtggatttatgggctcatgctgtaatgaaatgtactttatga
tatcctctatgtaataggaaggaactgtacttaagaccaacctccttata
ccttgcagttttcagatctggttttaattgtaaagtagttgggataagta
acagaaaaataattttcataagacttaaaagttttctaataccaagattt
taaaaagtgacttcaatatcaattctatgaaaactatgttttaaaaaatt
tcggtggtatcagaagctaaataaacaaaagagggcaatatttgatttat
tgtactcttaaaaaacaaaaacaaaaacaaacaaacaacaaacaaaacca
aagtagctgaagttagctattttgttaagggaagatacttacacagtttt
ttttttttaaagcaaatattttttttccatttttatagtatttagctcat
ttacatttcatgctataccaaagtccccataccaccacccccactcccta
ccaccactcctcttttgtcttgcgttcctgtactgagcaataagttgatg
tcatgggctttgctcaggacctattgcaggctgacttatcttgaacttga
aatcactattcgatgcctcatattaaaaactgtggaaatctgagca

gaattctcacctgaggaataccaaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccatctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gtccatagcagccttatttataatagccagaagctggaatgaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacagaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaaccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattatcccaaaacc
taggatacccaagatattggattttttgatgcttagcttcctttttttta
tttcaattttataggtatttagctcatttacattccaatgctatcccaaa
agtcccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_62181145_62182237
seq2: B6Ng01-035B22.b_47_1092

seq1  GAATTCAGTGAATAAATAACCATGTGGGTGGCTATCTTATAATATCTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGAATAAATAACCATGTGGGTGGCTATCTTATAATATCTTTC  50

seq1  CCTAAGGGTTAAGTTGTCAAGATTCATCTTGCTCCCTACAAGATTCATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAGGGTTAAGTTGTCAAGATTCATCTTGCTCCCTACAAGATTCATCT  100

seq1  TGTTCTTATGGAACATTCTCTAGCAACTCTACCTTAAGTTGGTCACCATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTTATGGAACATTCTCTAGCAACTCTACCTTAAGTTGGTCACCATC  150

seq1  TTCTCTGATCTTTCTCATACACAACAGCCTTCGGAAATTCTGTATCATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGATCTTTCTCATACACAACAGCCTTCGGAAATTCTGTATCATCT  200

seq1  TGGCTTATTTGTGATAGTTAATCATCCTACTACACAGTACTAAATGATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTATTTGTGATAGTTAATCATCCTACTACACAGTACTAAATGATAA  250

seq1  CCTTTTGTTCTCATATTTTTTATCATGCATTTTTAGAGGTACAGTTAGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTGTTCTCATATTTTTTATCATGCATTTTTAGAGGTACAGTTAGGG  300

seq1  GCATTGGCATTTATCATGCTTTCATTGATTGAATCCTTTATTCTTAGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGGCATTTATCATGCTTTCATTGATTGAATCCTTTATTCTTAGTTT  350

seq1  TCAAAATGATTTAAATTAACAAGTGATGTTGGCTACCAGAAATGGTCAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAATGATTTAAATTAACAAGTGATGTTGGCTACCAGAAATGGTCAAG  400

seq1  AATTTTGAGTGGATTTATGGGCTCATGCTGTAATGAAATGTACTTTATGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTGAGTGGATTTATGGGCTCATGCTGTAATGAAATGTACTTTATGA  450

seq1  TATCCTCTATGTAATAGGAAGGAACTGTACTTAAGACCAACCTCCTTATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTCTATGTAATAGGAAGGAACTGTACTTAAGACCAACCTCCTTATA  500

seq1  CCTTGCAGTTTTCAGATCTGGTTTTAATTGTAAAGTAGTTGGGATAAGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGCAGTTTTCAGATCTGGTTTTAATTGTAAAGTAGTTGGGATAAGTA  550

seq1  ACAGAAAAATAATTTTCATAAGACTTAAAAGTTTTCTAATACCAAGATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAAAATAATTTTCATAAGACTTAAAAGTTTTCTAATACCAAGATTT  600

seq1  TAAAAAGTGACTTCAATATCAATTCTATGAAAACTATGTTTTAAAAAATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAGTGACTTCAATATCAATTCTATGAAAACTATGTTTTAAAAAATT  650

seq1  TCGGTGGTATCAGAAGCTAAATAAACAAAAGAGGGCAATATTTGATTTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGTGGTATCAGAAGCTAAATAAACAAAAGAGGGCAATATTTGATTTAT  700

seq1  TGTACTCTTAAAAAAAACAAAAAACAAAAAACAAACAAACAAACAAACAA  750
      |||||||||  ||||||||||||   |||||||||||||| ||||||| |
seq2  TGTACTCTT--AAAAAACAAAAA--CAAAAACAAACAAAC-AACAAAC-A  744

seq1  AAACCAAAGTAGCTGAAGTTAGCTATTTTGTTAAGGGAAGATACTTACAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAAAGTAGCTGAAGTTAGCTATTTTGTTAAGGGAAGATACTTACAC  794

seq1  AGTTTTTTTTTTTTAAAGCAAATATTTTTTTTCCATTTTTATTAGGTATT  850
      ||||||||||||||||||||||||||||||||||||||||||   |||||
seq2  AGTTTTTTTTTTTTAAAGCAAATATTTTTTTTCCATTTTTAT--AGTATT  842

seq1  TAGCTCATTTACATTTCCAATGCTATACCAAAAGTCCCCCATACCCACCC  900
      |||||||||||||||||  |||||||||| ||||| |||||||||   ||
seq2  TAGCTCATTTACATTTC--ATGCTATACC-AAAGT-CCCCATACC--ACC  886

seq1  ACCCCCACTCCCCTACCCACCCACTCCCTCTTTTTGGCCCTGGCGTTCCC  950
      ||||||||| |||||||   ||||| ||||||||     || |||||  |
seq2  ACCCCCACT-CCCTACC--ACCACT-CCTCTTTT---GTCTTGCGTT--C  927

seq1  CTGTACTGGAGCATATAAAGTTTGCGTGTCCAATGGGCCTTTGCCCACAG  1000
      ||||||| ||||| || |||||    ||||  ||||| |||||  | |||
seq2  CTGTACT-GAGCA-AT-AAGTT--GATGTC--ATGGG-CTTTG--CTCAG  967

seq1  GAACCCTATTGCAGAGCTGACATTATCTAGAACTTTGAGAAACCACATAT  1050
      ||  |||||||||| |||||| |||||| ||||||   |||| ||| |||
seq2  GA--CCTATTGCAG-GCTGAC-TTATCTTGAACTT---GAAATCAC-TAT  1009

seq1  CCGATGGCTCCCTAATA-GAAAGACTGTGTGGGAAATCTGAGCA  1093
       |||||    ||| |||  ||| |||||   |||||||||||||
seq2  TCGATG----CCTCATATTAAAAACTGT---GGAAATCTGAGCA  1046


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