BAC Information

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BAC

Clone NameB6Ng01-035F04
Chromosome6 (Build37)4 (Build37)
Map Location 18,835,442 - 18,835,96810,663,528 - 10,664,054
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-035F04.bB6Ng01-035F04.g
ACCDH863819DH863820
length913798
definitionDH863819|Mus musculus domesticus DNA, BAC clone: B6Ng01-035F04, 5' end.DH863820|Mus musculus domesticus DNA, BAC clone: B6Ng01-035F04, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,442 - 18,835,968)(10,663,528 - 10,664,054)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttcttaagtccaccttcttgagttctttatatatgttggatattagtcct
ctatctgatttaggataggtaaagattctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaagctttggagtttca
tgaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctattcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataggtatgaatcgatttgc
attcttctacatgttaacaaccagttgtgccagcaccatttgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattcg
tctacttgtctgtcagtataccagtaccatgcagtttttatcacaattgc
tctctagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcagattgctctttctaattcggtgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcagatagccatttt
tacatgttgatcctgccaatccatgagcatgggagatagttccattttct
gagatcttctttaatttctttcttcagagacttgaagtttttatcaagag
atctttcacttcc
gaattctcccactattattgtgtgaggtgccatgtgtgctttgagcttta
ctaaagtttctttaatgaatgtggctgcccttgtatttggagcatagata
ttcagaattgagagttcctcttggaagtttttacctttgatgagtatgaa
gttcccctccttgtcttttttgatgactttaagttggaagtcgattttat
tagatattagaatggcaacttcagcttgtttcttcagaccagctgcttgg
aaaattgttttccagctttttattctgaggtagcgtcttttttttttttc
tgagatgtgtttcctgtaagcagcaaaatgttgggtcctgtttgtgtagc
cagtctgttagtctatgtctttttattggggagttgagtccattgatatt
aagagatattaaggaaaagtaattgttgcttcctattatttttgttgtta
acattggcattctgttcttgtggctgtcttctgttaggttaattgaagga
ttactttctttttttttttaggacatggtttctgtccttgtactggtttt
tttttctgttattatcctttgaaaggctggattcttggaaagataatgtg
tgaatttggttatgtcgtggaatactttggtttttcctctatagtaattg
aaagtttggctgggtatagtacctgtgctggcatttgtgttctcttagtg
tctgtataacatctgtcaggatttttctggcttttatatctctggggaaa
atctgttgaattctgataggcttgcccttatatgttacttgacctttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835442_18835968
seq2: B6Ng01-035F04.b_43_570 (reverse)

seq1  CCAGAGATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50

seq1  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  100
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAAATGGTGCTGGC  100

seq1  ACAACTGGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCT  150
      |||||||||||||| | ||||||||||||  ||||||| ||||| |||||
seq2  ACAACTGGTTGTTAACATGTAGAAGAATGCAAATCGATTCATACCTATCT  150

seq1  CCATGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  200
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  200

seq1  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250

seq1  TGGGCAGAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTG  299
      |||||| ||||||||| |||||||| |||||||||||||| |||||||| 
seq2  TGGGCACAGGGGAAAAATTCCTGAATAGAACAGCAATGGCTTGTGCTGTA  300

seq1  AGGTAGAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  349
      || | |||||| |||||||||||||| |||||||||||||| ||||||||
seq2  AGATCGAGAATTGACAAATGGGACCTCATGAAACTCCAAAGCTTCTGCAA  350

seq1  GGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAA  400

seq1  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  449
      | |||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GAATCTTTACCTATCCTAAATCAGATAGAGGACTAATATCCAACATATAT  450

seq1  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAA  499
      ||||||||||||||||||||||| ||||||||||||||||||||||| ||
seq2  AAAGAACTCAAGAAGGTGGACTTAAGAAAATCAAATAACCCCATTAAAAA  500

seq1  ATGGGGCTCAGAACTGAACAAAGAATTC  527
      ||||||||||||||||||||||||||||
seq2  ATGGGGCTCAGAACTGAACAAAGAATTC  528

seq1: chr4_10663528_10664054
seq2: B6Ng01-035F04.g_339_863 (reverse)

seq1  AAAAGGTCAAGTAACATATAAAGGCAAGCCTATCAGAATTACACCAGATT  50
      ||||||||||||||||||||| |||||||||||||||||| || |||| |
seq2  AAAAGGTCAAGTAACATATAAGGGCAAGCCTATCAGAATT-CAACAGA-T  48

seq1  TTTCACCAGAGACTATGAAAGCCAGAAGAGCCTGGACAGATGTTATACAG  100
      |||| ||||||| ||| |||||||||| |  |  ||||||||||||||||
seq2  TTTCCCCAGAGA-TATAAAAGCCAGAAAAATCCTGACAGATGTTATACAG  97

seq1  ACACTAAGAGAACACAAATGCCAGCCCAGGCTACTATACCCAGCCAAACT  150
      ||||||||||||||||||||||||| |||| |||||||||||||||||||
seq2  ACACTAAGAGAACACAAATGCCAGCACAGG-TACTATACCCAGCCAAACT  146

seq1  CTCAATTACCATAGATGGAGAAACCAAAGTATTCCACGACAAAACTAAAT  200
       |||||||| ||||| ||| ||||||||||||||||||||| ||| ||||
seq2  TTCAATTACTATAGA-GGAAAAACCAAAGTATTCCACGACATAACCAAAT  195

seq1  TCACCCATTATCTCTCCACGAATCCAGCCCTTCAAAGGATAATAACAG--  248
      |||| |||||||| |||| |||||||||| ||||||||||||||||||  
seq2  TCACACATTATCTTTCCAAGAATCCAGCCTTTCAAAGGATAATAACAGAA  245

seq1  AAAAAAACCAATACAAGGACGGGAACCACGCCCTAGAAAAAACAAGAAGA  298
      |||||||||| ||||||||| | ||||| | |||| |||||| |||||  
seq2  AAAAAAACCAGTACAAGGACAGAAACCATGTCCTAAAAAAAAAAAGAAAG  295

seq1  TAATCCCTCAACAAACCTAAAAGAAGACAGCCACAAGAACAGAATGCCAA  348
      |||||| ||||  ||||||| |||||||||||||||||||||||||||||
seq2  TAATCCTTCAATTAACCTAACAGAAGACAGCCACAAGAACAGAATGCCAA  345

seq1  CTTTAACAACAAAAATAACAGGAAGCAACAATTACCTTTCCTTAATATCT  398
        |||||||||||||||| |||||||||||||||| ||||||||||||||
seq2  TGTTAACAACAAAAATAATAGGAAGCAACAATTACTTTTCCTTAATATCT  395

seq1  CTTAATATCAATGGACTCAATTCCCCAATAAAAAGACATAGACTAACAGA  448
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CTTAATATCAATGGACTCAACTCCCCAATAAAAAGACATAGACTAACAGA  445

seq1  CTGGCTACACAAACAGGAACCAACATTCTGCTGCTTACAGGAAACCCATC  498
      |||||||||||||||||| |||||||| ||||||||||||||||| ||||
seq2  CTGGCTACACAAACAGGACCCAACATTTTGCTGCTTACAGGAAACACATC  495

seq1  TCAG-GGAAAAAGACAGACACTACCTCAGA  527
      ||||   ||||| | |||| ||||||||||
seq2  TCAGAAAAAAAAAAAAGACGCTACCTCAGA  525