BAC Information

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BAC

Clone NameB6Ng01-035I07
Chromosome6 (Build37)
Map Location 66,305,971 - 66,427,454
singlet/doubletdoublet
Overlap genenone
Upstream geneC130060K24Rik, 9030611K07Rik, A930038C07Rik, LOC667160, Prdm5, 4930544G11Rik, Ppia-ps6_651.1, LOC100041916
Downstream geneTpm3-rs3, LOC627751, Mad2l1, V1rc15, LOC100041941, Aurkb-ps, V1rc14, LOC546901, V1rc12, LOC627833, V1rc11, V1rc10, LOC100042816, LOC546902, V1rc13, EG546903, LOC100042008, 4930597O21Rik, Gng12, LOC100042837, Gadd45a, E230016M11Rik, EG667310, LOC667318, Serbp1, Il12rb2, LOC667324, EG667326, LOC672137, EG209589, LOC100042890, Il23r
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-035I07.bB6Ng01-035I07.g
ACCDH863961DH863962
length69080
definitionDH863961|Mus musculus domesticus DNA, BAC clone: B6Ng01-035I07, 5' end.DH863962|Mus musculus domesticus DNA, BAC clone: B6Ng01-035I07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(66,426,766 - 66,427,454)(66,305,971 - 66,306,050)
sequence
gaattctccttccctgtaagggaagtttgcttaagttaaattgattctat
ttgataggggaaagtagaagctaaatatgtgcttccaaaggcaatgctat
gaaactttaagcacaagtgtaagcttattttaaacagaaaaatttagatg
atcactttttaaaacttccccaagagtatgagtaatctattacatatgta
tatatctatatatgattcaaaatactcactcatgtgtattgtatatgtac
atatgtttaataccttgtgtggcataccaaagggttagacacaaagggtt
agtagccaatggatacttgttttaaaatgaatgaaatttttttcagtaga
tatgcttgtttatttttccatatctaataattataatagttattagtaaa
gatcattacactctcttaataagaaaacctttggtatgtagatatgattt
tgaaagcttttaaaaatctctatttgctaaattgttcatagaaaaactat
cactcagtttaactgtagaaaatcccattgaaaactaaggtcattgacta
tagtagaatcaataataagcatttcaagaatttattagttctaaaggtca
taccttaatgtaatttgaccacacttccacagaggcatttaaataattcc
taaggacaataaacacaattggaaccttcatattatctta
ctttgctactggcttgaaaagaatttgtcctgtgtggtaatttgaataag
agtgacccctataggaatatatgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_66426766_66427454
seq2: B6Ng01-035I07.b_33_722 (reverse)

seq1  TAAGATAATATTGAATGTTTCCATTTGTGTTTTATTGTCCTTAAGGAAAT  50
      |||||||||| |||| | ||||| ||||| |||||||||||| ||||| |
seq2  TAAGATAATA-TGAA-GGTTCCAATTGTG-TTTATTGTCCTT-AGGAATT  46

seq1  ATTTAAATGCCTCTGTTGAAGTGTGGTCAAATTACAATTAAGGTATGA-C  99
      |||||||||||||||| |||||||||||||||||| |||||||||||| |
seq2  ATTTAAATGCCTCTGTGGAAGTGTGGTCAAATTAC-ATTAAGGTATGACC  95

seq1  TTTAGAACT-ATTAATTCTTTGAATGCTTATTATTTATTCTACTCTAGTC  148
      ||||||||| || |||||||  ||||||||||||| |||||||| |||||
seq2  TTTAGAACTAATAAATTCTTGAAATGCTTATTATTGATTCTACTATAGTC  145

seq1  AATGACCTTAGTTTTCAATGG--ATTTCTACAGTTAAACTGAGTGATAG-  195
      |||||||||||||||||||||   ||||||||||||||||||||||||| 
seq2  AATGACCTTAGTTTTCAATGGGATTTTCTACAGTTAAACTGAGTGATAGT  195

seq1  TTTTCTATGAACAATTTAGCAAATAGAGATTTTT-AAAGCTTTCAAAATC  244
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TTTTCTATGAACAATTTAGCAAATAGAGATTTTTAAAAGCTTTCAAAATC  245

seq1  ATATCTACATACCAAAGGTTTTCTTATTAAGAGAGTGTAATGATCTTTAC  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTACATACCAAAGGTTTTCTTATTAAGAGAGTGTAATGATCTTTAC  295

seq1  TAATAACTATTATAATTATTAGATATGGAAAAATAAACAAGCATATCTAC  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAACTATTATAATTATTAGATATGGAAAAATAAACAAGCATATCTAC  345

seq1  TGAAAAAAATTTCATTCATTTTAAAACAAGTATCCATTGGCTACTAACCC  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAAAATTTCATTCATTTTAAAACAAGTATCCATTGGCTACTAACCC  395

seq1  TTTGTGTCTAACCCTTTGGTATGCCACACAAGGTATTAAACATATGTACA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGTCTAACCCTTTGGTATGCCACACAAGGTATTAAACATATGTACA  445

seq1  TATACAATACACATGAGTGAGTATTTTGAATCATATATAGATATATACAT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACAATACACATGAGTGAGTATTTTGAATCATATATAGATATATACAT  495

seq1  ATGTAATAGATTACTCATACTCTTGGGGAAGTTTTAAAAAGTGATCATCT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAATAGATTACTCATACTCTTGGGGAAGTTTTAAAAAGTGATCATCT  545

seq1  AAATTTTTCTGTTTAAAATAAGCTTACACTTGTGCTTAAAGTTTCATAGC  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTTCTGTTTAAAATAAGCTTACACTTGTGCTTAAAGTTTCATAGC  595

seq1  ATTGCCTTTGGAAGCACATATTTAGCTTCTACTTTCCCCTATCAAATAGA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCCTTTGGAAGCACATATTTAGCTTCTACTTTCCCCTATCAAATAGA  645

seq1  ATCAATTTAACTTAAGCAAACTTCCCTTACAGGGAAGGAGAATTC  689
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATTTAACTTAAGCAAACTTCCCTTACAGGGAAGGAGAATTC  690

seq1: chr6_66305971_66306050
seq2: B6Ng01-035I07.g_71_150

seq1  CTTTGCTACTGGCTTGAAAAGAATTTGTCCTGTGTGGTAATTTGAATAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCTACTGGCTTGAAAAGAATTTGTCCTGTGTGGTAATTTGAATAAG  50

seq1  AGTGACCCCTATAGGAATATATGTGTGTGT  80
      ||||||||||||||||||||||||||||||
seq2  AGTGACCCCTATAGGAATATATGTGTGTGT  80