BAC Information

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BAC

Clone NameB6Ng01-035K10
Chromosome6 (Build37)
Map Location 130,694,477 - 130,818,595
singlet/doubletdoublet
Overlap geneEG625558, LOC625566, EG636947
Upstream geneGm156, Klra17, Klra5, LOC667764, Klra6, LOC100038893, LOC100038894, LOC100038895, Klra4, LOC667769, LOC100038897, Klra8, EG654449, Klra9, Klra7, LOC100038898, Klra12, Klra10, Klra13, Klra3, Klra1, LOC100038902, LOC100038903, LOC625436, EG625473, LOC640779, LOC667793, EG667798
Downstream geneLOC625628, EG625648, LOC667830, EG434094, Klra2, LOC434095, 2010012C16Rik, Styk1, Csda, LOC625758, 5430401F13Rik, LOC625781, Tas2r130, Tas2r107, Tas2r106, Tas2r104, Tas2r105, Tas2r114
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-035K10.bB6Ng01-035K10.g
ACCDH864061DH864062
length1,046979
definitionDH864061|Mus musculus domesticus DNA, BAC clone: B6Ng01-035K10, 5' end.DH864062|Mus musculus domesticus DNA, BAC clone: B6Ng01-035K10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(130,694,477 - 130,695,543)(130,817,592 - 130,818,595)
sequence
gaattctcaaattcatcaaaaatctacttttagtactacaaataaaattg
gcagtaatatgactctaaaagttataccgtttttactagaaatgtacatc
actaagaattcagtggagaaacttgatttgtatatcaaaaatatacagaa
agagaaggacttcagagcctgtattcttatatatattttttataataacc
tccaaccaagaatcaagaacctaaacacaaggtgacacaaacggatttta
aaggccagatttaaagaatgatgctaaataaaatgcatgttttctgatgc
aaccagaacaatgtccacatgagctcaatgagaatatgacagcaatcaca
agaccagtacaaggaagacaataccctagctttaagaaggagaaagagtt
agaatgtgtcacccaaaggcagaaattatacaaagttcacaatttcttag
agagggaaaataaattttatactatgtatggacacatgttcgattcaaga
aatattgctagaacaaatcagactccatgattaaatacatttttggtttc
tactttttttcatctgagagaaagagaaagagagagagagagagagagag
agagagagagagagagagagagagagataaaggcagaaaaagagacaaaa
agacagaaaagtcagagaaaccatgatattgagtttgttcagagagtgga
gatggtctgcaagaagctgaaaaagagaaaaataagaggaaatatatact
ctaacacaaataaaaatgaaataaatctataaattactcaaatataaatg
atcattactgatcattcacatgtaacagaaaaaataagagtaattagaat
ataatctgatactttgtaaatcgttaaacagtatatttcaaaacatgagt
attcagtaaatgagcagagatcatatagtatcatgtatttattttctttt
atcattattcgaagaatcttaggacatttctattgcagagcttttctagc
attgtcagtctagatactcttggtttatatcatcacatgacataaa
gaattcatacaggagagaaaccttacaaatgtaatgagtgtgagaaatct
tttacacagtcctacaaacttcaagttcactacagaatccatacaggaca
gaagccttacaaatgtaatgaatgtggcaagtcttttatacggaacacag
accttaaagttcactaccgaatccatacaagagtgaaaccctaaattatt
ttttggttgatgcaaatcttttacaaagaactcagagcttaaagttcacc
aaagaatctgtacaggggaaaaaacttataaatataatcaaagtggcaaa
tcctttacacaacactcagatcatgaagctcaccacagaatccatactgg
agagaatctttacaaatgaaatgaaggtggcatatcattcaataaatctc
caagtctttattttcactacagagtctacacaagagataaaccttacaaa
tgtggacttgtgacaatctttaacctggtcctccactttccaaagttcat
caaagttcatatactggaaaacaaccttgtaagtgtagtgagtgtagaaa
atatttttcctatcctcaaatcttcaatatcacctcagaatacaaactag
aaactaccttactaatgaaaggaatgtgggatattcttgacatggaaata
atgccttcaaagacgacccagcatgcatcctggagagaaacattacaaat
atacaggacatggcaaatattttagcacaacctcaaagcttggattatat
agattcatgcatgatgccacttaataggacattattgtctcaccattcat
aaggaaacattattttaattgagaaagttattgtcagatttacatatgtt
aaaccctatatcagagaattctcataaagaacatatgtgatagtattcaa
aacttttactccaattcacttatatagtactattgaaaacaaacatgaaa
ctctttcctcagctttacatctgacttat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_130694477_130695543
seq2: B6Ng01-035K10.b_45_1090

seq1  GAATTCTCAAATTCATCAAAAATCTACTTTTAGTACTACAAATAAAATTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAAATTCATCAAAAATCTACTTTTAGTACTACAAATAAAATTG  50

seq1  GCAGTAATATGACTCTAAAAGTTATACCGTTTTTACTAGAAATGTACATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTAATATGACTCTAAAAGTTATACCGTTTTTACTAGAAATGTACATC  100

seq1  ACTAAGAATTCAGTGGAGAAACTTGATTTGTATATCAAAAATATACAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGAATTCAGTGGAGAAACTTGATTTGTATATCAAAAATATACAGAA  150

seq1  AGAGAAGGACTTCAGAGCCTGTATTCTTATATATATTTTTTATAATAACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAGGACTTCAGAGCCTGTATTCTTATATATATTTTTTATAATAACC  200

seq1  TCCAACCAAGAATCAAGAACCTAAACACAAGGTGACACAAACGGATTTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACCAAGAATCAAGAACCTAAACACAAGGTGACACAAACGGATTTTA  250

seq1  AAGGCCAGATTTAAAGAATGATGCTAAATAAAATGCATGTTTTCTGATGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCAGATTTAAAGAATGATGCTAAATAAAATGCATGTTTTCTGATGC  300

seq1  AACCAGAACAATGTCCACATGAGCTCAATGAGAATATGACAGCAATCACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGAACAATGTCCACATGAGCTCAATGAGAATATGACAGCAATCACA  350

seq1  AGACCAGTACAAGGAAGACAATACCCTAGCTTTAAGAAGGAGAAAGAGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCAGTACAAGGAAGACAATACCCTAGCTTTAAGAAGGAGAAAGAGTT  400

seq1  AGAATGTGTCACCCAAAGGCAGAAATTATACAAAGTTCACAATTTCTTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGTGTCACCCAAAGGCAGAAATTATACAAAGTTCACAATTTCTTAG  450

seq1  AGAGGGAAAATAAATTTTATACTATGTATGGACACATGTTCGATTCAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGAAAATAAATTTTATACTATGTATGGACACATGTTCGATTCAAGA  500

seq1  AATATTGCTAGAACAAATCAGACTCCATGATTAAATACATTTTTGGTTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTGCTAGAACAAATCAGACTCCATGATTAAATACATTTTTGGTTTC  550

seq1  TACTTTTTTTCATCTGAGAGAAAGAGAAAGAGAGAGAGAGAGAGAGAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTTTTTCATCTGAGAGAAAGAGAAAGAGAGAGAGAGAGAGAGAGAG  600

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGATAAAGGCAGAAAAAGAGACAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGATAAAGGCAGAAAAAGAGACAAAA  650

seq1  AGACAGAAAAGTCAGAGAAACCATGATATTGAGTTTGTTCAGAGAGTGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGAAAAGTCAGAGAAACCATGATATTGAGTTTGTTCAGAGAGTGGA  700

seq1  GATGGTCTGCAAGAAGCTGAAAAAGAGAAAAATAAGAGGAAATATATACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTCTGCAAGAAGCTGAAAAAGAGAAAAATAAGAGGAAATATATACT  750

seq1  CTAACACAAATAAAAATGAAATAAATCTATAAATTACTCAAATATAAATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACACAAATAAAAATGAAATAAATCTATAAATTACTCAAATATAAATG  800

seq1  ATCATTACTGATCATTCACATGTAACAGAAAAAATAAGAGTAATTAGAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTACTGATCATTCACATGTAACAGAAAAAATAAGAGTAATTAGAAT  850

seq1  ATAATCTGATACTTTGTAAAATCGTTAAAACAGTATATTTCAAAACATGA  900
      ||||||||||||||||| |||||||| |||||||||||||||||||||||
seq2  ATAATCTGATACTTTGT-AAATCGTT-AAACAGTATATTTCAAAACATGA  898

seq1  GTATTCAGGTAAAATGAGGCAGAGATCATATAGTATCCATGGTAATATAT  950
      ||||||||   |||||| |||||||||||||||||| ||||   || |||
seq2  GTATTCAG--TAAATGA-GCAGAGATCATATAGTAT-CATG--TATTTAT  942

seq1  TTTCTTTTATTCATTATTTCGAAAGAAATTCTTAGGAACAATTTCTATTG  1000
      ||||||||| |||||| |||| |||||  ||||||||   ||||||||||
seq2  TTTCTTTTA-TCATTA-TTCG-AAGAA--TCTTAGGA--CATTTCTATTG  985

seq1  CAGAGCTTTTCTAGCCATATGTCAGGTCTAGATTACTCTTGGTTTTATAT  1050
      |||||||||||||| ||| ||||| ||||||| ||||||||| |||||| 
seq2  CAGAGCTTTTCTAG-CAT-TGTCA-GTCTAGA-TACTCTTGG-TTTATA-  1029

seq1  TCATCACATGACATAAA  1067
      |||||||||||||||||
seq2  TCATCACATGACATAAA  1046

seq1: chr6_130817592_130818595
seq2: B6Ng01-035K10.g_67_1045 (reverse)

seq1  ATAATGTCAGATGTTTAAAGCTGAGTGAAAGAGTTTTTCATGTTTTGTTT  50
      |||| ||||||||  |||||||||| |||||||  ||||||||||   ||
seq2  ATAA-GTCAGATG--TAAAGCTGAG-GAAAGAG--TTTCATGTTT--GTT  42

seq1  TTCAAATAAGTACTTAATATAAGTTGAATTTGGGAGTAAAAAGTTTTTGA  100
      |||||   ||||||  ||||||| ||||||  |||||||||   ||||||
seq2  TTCAA--TAGTACT--ATATAAG-TGAATT--GGAGTAAAA--GTTTTGA  83

seq1  ATACTATCAACATATGGTTTCTTTATGAGAATTCTCTGATAATAGGGTTT  150
      |||||||| |||||||  |||||||||||||||||||||| |||||| ||
seq2  ATACTATC-ACATATG--TTCTTTATGAGAATTCTCTGAT-ATAGGG-TT  128

seq1  TAACATTATGTAAATTCTGACAATAACTTTCTCAATTAAAATAATGTTTC  200
      ||||| |||||||| |||||||||||||||||||||||||||||||||||
seq2  TAACA-TATGTAAA-TCTGACAATAACTTTCTCAATTAAAATAATGTTTC  176

seq1  CTTATGAATGGTGAGACAATAATGTCCTATTAAGTTGGCATCATGCATGA  250
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CTTATGAATGGTGAGACAATAATGTCCTATTAAG-TGGCATCATGCATGA  225

seq1  ATCTATATAATCCAAGCTTTGAGGTTGTGCTAAAATATTTGCCATGTCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATATAATCCAAGCTTTGAGGTTGTGCTAAAATATTTGCCATGTCCT  275

seq1  GTATATTTGTAATGTTTCTCTCCAGGATGCATGCTGGGTCGTCTTTGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATTTGTAATGTTTCTCTCCAGGATGCATGCTGGGTCGTCTTTGAAG  325

seq1  GCATTATTTCCATGTCAAGAATATCCCACATTCCTTTCATTAGTAAGGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTATTTCCATGTCAAGAATATCCCACATTCCTTTCATTAGTAAGGTA  375

seq1  GTTTCTAGTTTGTATTCTGAGGTGATATTGAAGATTTGAGGATAGGAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTAGTTTGTATTCTGAGGTGATATTGAAGATTTGAGGATAGGAAAA  425

seq1  ATATTTTCTACACTCACTACACTTACAAGGTTGTTTTCCAGTATATGAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTCTACACTCACTACACTTACAAGGTTGTTTTCCAGTATATGAAC  475

seq1  TTTGATGAACTTTGGAAAGTGGAGGACCAGGTTAAAGATTGTCACAAGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATGAACTTTGGAAAGTGGAGGACCAGGTTAAAGATTGTCACAAGTC  525

seq1  CACATTTGTAAGGTTTATCTCTTGTGTAGACTCTGTAGTGAAAATAAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTTGTAAGGTTTATCTCTTGTGTAGACTCTGTAGTGAAAATAAAGA  575

seq1  CTTGGAGATTTATTGAATGATATGCCACCTTCATTTCATTTGTAAAGATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGAGATTTATTGAATGATATGCCACCTTCATTTCATTTGTAAAGATT  625

seq1  CTCTCCAGTATGGATTCTGTGGTGAGCTTCATGATCTGAGTGTTGTGTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCAGTATGGATTCTGTGGTGAGCTTCATGATCTGAGTGTTGTGTAA  675

seq1  AGGATTTGCCACTTTGATTATATTTATAAGTTTTTTCCCCTGTACAGATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTTGCCACTTTGATTATATTTATAAGTTTTTTCCCCTGTACAGATT  725

seq1  CTTTGGTGAACTTTAAGCTCTGAGTTCTTTGTAAAAGATTTGCATCAACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGTGAACTTTAAGCTCTGAGTTCTTTGTAAAAGATTTGCATCAACC  775

seq1  AAAAAATAATTTAGGGTTTCACTCTTGTATGGATTCGGTAGTGAACTTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATAATTTAGGGTTTCACTCTTGTATGGATTCGGTAGTGAACTTTA  825

seq1  AGGTCTGTGTTCCGTATAAAAGACTTGCCACATTCATTACATTTGTAAGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTGTGTTCCGTATAAAAGACTTGCCACATTCATTACATTTGTAAGG  875

seq1  CTTCTGTCCTGTATGGATTCTGTAGTGAACTTGAAGTTTGTAGGACTGTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGTCCTGTATGGATTCTGTAGTGAACTTGAAGTTTGTAGGACTGTG  925

seq1  TAAAAGATTTCTCACACTCATTACATTTGTAAGGTTTCTCTCCTGTATGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGATTTCTCACACTCATTACATTTGTAAGGTTTCTCTCCTGTATGA  975

seq1  ATTC  1004
      ||||
seq2  ATTC  979