BAC Information

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BAC

Clone NameB6Ng01-037A04
Chromosome6 (Build37)
Map Location 15,764,009 - 15,765,085
singlet/doubletsinglet
Overlap genenone
Upstream geneFoxp2, LOC100040568, Mdfic
Downstream geneLOC100041116
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-037A04.bB6Ng01-037A04.g
ACCDH865014DH865015
length1,2381,069
definitionDH865014|Mus musculus domesticus DNA, BAC clone: B6Ng01-037A04, 5' end.DH865015|Mus musculus domesticus DNA, BAC clone: B6Ng01-037A04, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctggaccaaaccaagaatgaaagccatctgggcaaattccaaact
tgcatctccatgtctgatgtgaaagcaccattcagatcaccaactccttc
ctgttttgttaactgtagcacaattcacattggttggttctatgctccat
tagccctttgctaaacaggtatcccatggctctggtatctcaaacatctt
gtctactcaaaggcaactgcaatggtacaggttcatgggccaaggtcagg
gttctacacgtgatcatctgggctcctccacagggcttggttggataaca
tctccaactctgtactctgtaccactccagtgttaggttgattctactcc
attgctgctgctgttcttggtggtcatcccatggtactggtatctccaac
atgctggggtgtctcactgcaattagattttaaccatcactgtctaatag
gctcccaagcctcaacttctttacatgatgccttcagtcctagaccatct
gaggtgaagcaactgaagcttcaccttcaccagtgaccttccctgacctc
tcacagtgccaagcctcagctactcttcattacctctatataccttcaaa
atcagtaccacctgggtaattcttacacattatcaagtccagctgcagca
tgaggcacaaccttggctatctctgggacacagcttctttgtactcttaa
aaaacacttcccagaagatttcaactcagtgatgctaggctcttcttagt
caccactaatttgttagctccagataactagcattaattttccctgtagt
cccttctattcttgactttaaagccagagctacatggccaaagctgttga
gttctgctattcactggaacatgggccacttgttctattacattatcacc
agctttctgttttccactcataaactacctaagattagccatcctggaac
ttgctctgtagactaatatgactcagatctgcatggctctgtctcctgaa
tgctgggattatggtgtagatcaccatgccttggaacaagcttttcttct
tctggatcttgttctgtacaaacatggtcttgaactcgaatctgcttgcc
tcttctcatggattaaagggtgtactaccatgcctgggcttacaattatg
tgacaattctcagaatcggaataaaacccttgccctgttcgattaatctt
tccagataaactccataatagaaccaggtatataaact
gaattcctataaagtaacgggaagaactagtatgtgtgtgatcatatgta
tttttatatttatatataaataagaaattaatttcttacagtaaatttca
ccaagaacgaagaatggaaagcatgctttccaagcttatatttccaatgt
gtcactattgctcgcttactttaaaagttacgcatataacattttgtaat
gtgcactttgaatcttctttccacttcactaaacaaaaattccacccctc
ttgggtgagctacgtgagtacatgcacacatctgtgtgtatatctttgtt
tccttgttacattatcccagaacctgccctgcatggtggatatgaagaaa
gtttgctggcatttctgtagaaatatgtgagaaatctcattctttcttcc
caagagatgagatctgtgttaaaatagctcagttatacagagaacatggg
cagatagagaacagattaaaagtgatcatactgtgctcagcaaatactgt
caaaggccattggtagtatattggggaagaaaaaaaattccacagaagct
caaattgtagtacaatagactagcaagtattgtgaggctgcagcgagggt
acactgtgctcaggaggaaaaataggcttttattagagataagacatctc
cctttccttaggaattcagaaatttgggacagtgtaatagtctgttatct
ctccaacatgaccactttattaaaacaagaaaggatttcaaatcatcccc
cacttgcctaccattgccaggcaaaagcaattagcagtataaatcagacc
tgttccctctaaagtgcttgagcgatgaagcatgtcattttcttatttgt
gaaaggttctgagtctttttggcagcttgataccagtacacattgagttc
tggctttcaatcagtaaattatgagaaactagaaatcctgaagctcgacg
cctttctcgtgttacaaacttgagcaccaagattcttcaatgggaatgac
agttcataaacctgcctgacaaagagtgacatgtatatcacctgaaatta
tgggtcttattagctttat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_15764009_15765085
seq2: B6Ng01-037A04.g_68_1136

seq1  GAATTCCTATAAAGTAACGGGAAGAACTAGTATGTGTGTGATCATATGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTATAAAGTAACGGGAAGAACTAGTATGTGTGTGATCATATGTA  50

seq1  TTTTTATATTTATATATAAATAAGAAATTAATTTCTTACAGTAAATTTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATATTTATATATAAATAAGAAATTAATTTCTTACAGTAAATTTCA  100

seq1  CCAAGAACGAAGAATGGAAAGCATGCTTTCCAAGCTTATATTTCCAATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAACGAAGAATGGAAAGCATGCTTTCCAAGCTTATATTTCCAATGT  150

seq1  GTCACTATTGCTCGCTTACTTTAAAAGTTACGCATATAACATTTTGTAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACTATTGCTCGCTTACTTTAAAAGTTACGCATATAACATTTTGTAAT  200

seq1  GTGCACTTTGAATCTTCTTTCCACTTCACTAAACAAAAATTCCACCCCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCACTTTGAATCTTCTTTCCACTTCACTAAACAAAAATTCCACCCCTC  250

seq1  TTGGGTGAGCTACGTGAGTACATGCACACATCTGTGTGTATATCTTTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTGAGCTACGTGAGTACATGCACACATCTGTGTGTATATCTTTGTT  300

seq1  TCCTTGTTACATTATCCCAGAACCTGCCCTGCATGGTGGATATGAAGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGTTACATTATCCCAGAACCTGCCCTGCATGGTGGATATGAAGAAA  350

seq1  GTTTGCTGGCATTTCTGTAGAAATATGTGAGAAATCTCATTCTTTCTTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCTGGCATTTCTGTAGAAATATGTGAGAAATCTCATTCTTTCTTCC  400

seq1  CAAGAGATGAGATCTGTGTTAAAATAGCTCAGTTATACAGAGAACATGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGATGAGATCTGTGTTAAAATAGCTCAGTTATACAGAGAACATGGG  450

seq1  CAGATAGAGAACAGATTAAAAGTGATCATACTGTGCTCAGCAAATACTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATAGAGAACAGATTAAAAGTGATCATACTGTGCTCAGCAAATACTGT  500

seq1  CAAAGGCCATTGGTAGTATATTGGGGAAGAAAAAAAATTCCACAGAAGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGCCATTGGTAGTATATTGGGGAAGAAAAAAAATTCCACAGAAGCT  550

seq1  CAAATTGTAGTACAATAGACTAGCAAGTATTGTGAGGCTGCAGCGAGGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTGTAGTACAATAGACTAGCAAGTATTGTGAGGCTGCAGCGAGGGT  600

seq1  ACACTGTGCTCAGGAGGAAAAATAGGCTTTTATTAGAGATAAGACATCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGTGCTCAGGAGGAAAAATAGGCTTTTATTAGAGATAAGACATCTC  650

seq1  CCTTTCCTTAGGAATTCAGAAATTTGGGACAGTGTAATAGTCTGTTATCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCCTTAGGAATTCAGAAATTTGGGACAGTGTAATAGTCTGTTATCT  700

seq1  CTCCAACATGACCACTTTATTAAAACAAGAAAGGATTTCAAATCATCCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAACATGACCACTTTATTAAAACAAGAAAGGATTTCAAATCATCCCC  750

seq1  CACTTGCCTACCATTGCCAGGCAAAAGCAATTAGCAGTATAAATCAGACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGCCTACCATTGCCAGGCAAAAGCAATTAGCAGTATAAATCAGACC  800

seq1  TGTTCCCTCTAAAGGTGCTTGAGCGATGAAGCATGTCAATTTTCTTATTT  850
      ||||||||||||| ||||||||||||||||||||||| ||||||||||||
seq2  TGTTCCCTCTAAA-GTGCTTGAGCGATGAAGCATGTC-ATTTTCTTATTT  848

seq1  GTGAAAGGTTCTGAGTCTTTTTGGCAGCTTGATACCAGTACACATTGAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAAGGTTCTGAGTCTTTTTGGCAGCTTGATACCAGTACACATTGAGT  898

seq1  TCTGGCTTTCCAATCAGGTAAAATATGAGAAACTAGAAATCCTGAAGCTC  950
      ||||||||| |||||| ||||| |||||||||||||||||||||||||||
seq2  TCTGGCTTT-CAATCA-GTAAATTATGAGAAACTAGAAATCCTGAAGCTC  946

seq1  GACGCCTTTCTCGTGTAACAAACCTGGAGCACCAAGATTCTTCAAGGGGA  1000
      |||||||||||||||| ||||| || ||||||||||||||||||| ||||
seq2  GACGCCTTTCTCGTGTTACAAA-CTTGAGCACCAAGATTCTTCAATGGGA  995

seq1  ATGACAGTTCATAAAACATGCCTGACAGAGAGTGACATGTAAATCACCTG  1050
      |||||||||||| |||| ||||||||| ||||||||||||| ||||||||
seq2  ATGACAGTTCAT-AAACCTGCCTGACAAAGAGTGACATGTATATCACCTG  1044

seq1  AAATTCATGGGTCCTTATTAGCTTTAT  1077
      ||||| |||||| ||||||||||||||
seq2  AAATT-ATGGGT-CTTATTAGCTTTAT  1069