BAC Information

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BAC

Clone NameB6Ng01-037A07
Chromosome6 (Build37)15 (Build37)
Map Location 18,835,446 - 18,835,96821,673,378 - 21,674,576
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-037A07.bB6Ng01-037A07.g
ACCDH865020DH865021
length9351,163
definitionDH865020|Mus musculus domesticus DNA, BAC clone: B6Ng01-037A07, 5' end.DH865021|Mus musculus domesticus DNA, BAC clone: B6Ng01-037A07, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,446 - 18,835,968)(21,673,378 - 21,674,576)
sequence
gaattctttgttcagttctgagccccattttttaatggggttattcgatt
ttctgaagtccaccttattgagttctttatatatgttggatattagtccc
ctatctgatttaggttaggtaaagatcctttcccatctgttggtggtctt
tttgtcttattgacggtgtcttttgccttgcagaaactttggagtttcat
taggtcccatttgtcaattctcgatcttacagcacaaacaattgctgttc
tgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccact
ttctcctctataagtttcagtgtctctggttttatgtgaaattccttgat
ccacttagatttgaccttagtacaaggagataagtatggatcgattcgca
ttcttcttcacgataacaaccagttgtgccagcaccaattgttgaaaatg
ctgtctttcttcctctggatggttttagctcccttgtcgaagatcaagtg
accataggtgtgtgggttcatttctgggtcttcaattctattccattggt
ctacttgtctgtctctataccagtaccatgcagtttttatcacaattgct
ctgtagtaaagctttaggtctggcatggtgattctgccagttcttttatc
cttgagaagactttttgctaacctaggttttttgttattccagtcaaatt
tgcaaattgctccttccaattcgttgaagaattgagttggaattttgatg
gggattgcattgaatctgtagattgcttttggcaagatagccatttttac
aatgttgatccatgagcatgggagatctttccatcttctgagctcttcct
taatttctttcttcagagatttgaagttttatcatacagatctttcactt
ccttagttagagtcatgccaagatattttatatta
gaattctctgtgtttcctgtattctctggttttgctaccctgatggggta
cctaataatatccagtactttaatggcttcttgaccttaagaactagaat
taaaataatttgaataacatatttattaatttaaccagtactatctcaca
tgagatgagattatttatctttccctagactttaaaacaaaatttgtgtc
tgtctttgatagatagaatgtgacagtgaggatgcagtgttatggaatat
tgttatgacttttggaagccaggctagagtattaaataatgtaaaaacac
aggcaaagaaacattgaaaagtgaaagactattcataagtgatcatccag
ctggatggagttatacaaacgatccccacagagataacagttcaaagcta
gctctatatttctcaaaacatcttgaagaagaactggctattatcatcct
ttattttattagggagggacaatgagacaagctacttaaaacctgtgatt
aagaataggtaagattactctcaggaataagttggcaggaacaggtaggt
ctgttttgtcagggctcagatgttcattattccctactttgacagagata
tttgtctaagggaaaaattgtttaaaatgcttaagcaaatatttcatgtc
ttataacaattcctgtcagtcatcctgtccaccatatacgtacaagtagt
caatcttccagttatgtttctcacatggtggtatgaaacgtgagaattca
atatggtataaccagttaactcgataggacaggagtgggggctttttagg
acatcaatatggatgttgcaccttggaaacacaattcatgaaaatatttg
aaaattggtggtgaataatgtggcacagtgaaacaggagagacgttccaa
tttatgaacacaaatttactctgcaattggaaaacattaagattccacaa
agctttctgaagaaaatgcctggattatttatataacttgatccaatgct
aaatgtttagtaccataccttttggttttgttgtttgttgttgttttcct
aaattccgaatgcatatttgttaaggtcctcccatctctgaagcattaag
gcgaccattaagttataatccatgagtagacatgctagccttagaaaaaa
ttacttcaatgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835446_18835968
seq2: B6Ng01-037A07.b_48_570 (reverse)

seq1  AGATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAA  50
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAA  50

seq1  ACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAA  100
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  ACCATCCAGAGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAA  100

seq1  CTGGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCTCCAT  150
      |||||||||||| || ||||||||| |||||||||||||||||||||| |
seq2  CTGGTTGTTATCGTGAAGAAGAATGCGAATCGATCCATACTTATCTCCTT  150

seq1  GTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAG  200
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GTACTAAGGTCAAATCTAAGTGGATCAAGGAATTTCACATAAAACCAGAG  200

seq1  ACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGG  250

seq1  CAGAGGGGAAAAGTTCCTGAACAGAACAGCAA-TGGCTGTGCTGTGAGGT  299
      || ||||||||| ||||||||||||||||||| ||  |||||||| || |
seq2  CACAGGGGAAAAATTCCTGAACAGAACAGCAATTGTTTGTGCTGTAAGAT  300

seq1  AGAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCA  349
       |||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCA  350

seq1  AAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGAT  399
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AAAGACACCGTCAATAAGACAAAAAGACCACCAACAGA-TGGGAAAGGAT  399

seq1  CTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAG  449
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACCTAACCTAAATCAGATAGGGGACTAATATCCAACATATATAAAG  449

seq1  AACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAAATGG  499
      ||||||| |||||||||||||||||||| |||||||||||||| ||||||
seq2  AACTCAATAAGGTGGACTTCAGAAAATCGAATAACCCCATTAAAAAATGG  499

seq1  GGCTCAGAACTGAACAAAGAATTC  523
      ||||||||||||||||||||||||
seq2  GGCTCAGAACTGAACAAAGAATTC  523

seq1: chr15_21673378_21674576
seq2: B6Ng01-037A07.g_69_1231

seq1  GAATTCTCTGTGTTTCCTGTATTCTCTGGTTTTGCTACCCTGATGGGGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGTGTTTCCTGTATTCTCTGGTTTTGCTACCCTGATGGGGTA  50

seq1  CCTAATAATATCCAGTACTTTAATGGCTTCTTGACCTTAAGAACTAGAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAATAATATCCAGTACTTTAATGGCTTCTTGACCTTAAGAACTAGAAT  100

seq1  TAAAATAATTTGAATAACATATTTATTAATTTAACCAGTACTATCTCACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAATTTGAATAACATATTTATTAATTTAACCAGTACTATCTCACA  150

seq1  TGAGATGAGATTATTTATCTTTCCCTAGACTTTAAAACAAAATTTGTGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATGAGATTATTTATCTTTCCCTAGACTTTAAAACAAAATTTGTGTC  200

seq1  TGTCTTTGATAGATAGAATGTGACAGTGAGGATGCAGTGTTATGGAATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTTGATAGATAGAATGTGACAGTGAGGATGCAGTGTTATGGAATAT  250

seq1  TGTTATGACTTTTGGAAGCCAGGCTAGAGTATTAAATAATGTAAAAACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATGACTTTTGGAAGCCAGGCTAGAGTATTAAATAATGTAAAAACAC  300

seq1  AGGCAAAGAAACATTGAAAAGTGAAAGACTATTCATAAGTGATCATCCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAAGAAACATTGAAAAGTGAAAGACTATTCATAAGTGATCATCCAG  350

seq1  CTGGATGGAGTTATACAAACGATCCCCACAGAGATAACAGTTCAAAGCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGATGGAGTTATACAAACGATCCCCACAGAGATAACAGTTCAAAGCTA  400

seq1  GCTCTATATTTCTCAAAACATCTTGAAGAAGAACTGGCTATTATCATCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTATATTTCTCAAAACATCTTGAAGAAGAACTGGCTATTATCATCCT  450

seq1  TTATTTTATTAGGGAGGGACAATGAGACAAGCTACTTAAAACCTGTGATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTATTAGGGAGGGACAATGAGACAAGCTACTTAAAACCTGTGATT  500

seq1  AAGAATAGGTAAGATTACTCTCAGGAATAAGTTGGCAGGAACAGGTAGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATAGGTAAGATTACTCTCAGGAATAAGTTGGCAGGAACAGGTAGGT  550

seq1  CTGTTTTGTCAGGGCTCAGATGTTCATTATTCCCTACTTTGACAGAGATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTTGTCAGGGCTCAGATGTTCATTATTCCCTACTTTGACAGAGATA  600

seq1  TTTGTCTAAGGGAAAAATTGTTTAAAATGCTTAAGCAAATATTTCATGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTAAGGGAAAAATTGTTTAAAATGCTTAAGCAAATATTTCATGTC  650

seq1  TTATAACAATTCCTGTCAGTCATCCTGTCCACCATATACGTACAAGTAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAACAATTCCTGTCAGTCATCCTGTCCACCATATACGTACAAGTAGT  700

seq1  CAATCTTCCAGTTATGTTTCTCACATGGTGGTATGAAACGTGAGAATTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTTCCAGTTATGTTTCTCACATGGTGGTATGAAACGTGAGAATTCA  750

seq1  ATATGGTATAACCAGTTAACTCGATAGGACAGGAGTGGGGGCTTTTTAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGTATAACCAGTTAACTCGATAGGACAGGAGTGGGGGCTTTTTAGG  800

seq1  ACATCAATATGGATGTTGCACCTTGGAAACACAATTCATGAAAATATTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCAATATGGATGTTGCACCTTGGAAACACAATTCATGAAAATATTTG  850

seq1  AAAATTGGTGGTGAATAATGTGGCACAGTGAAACAGGAAGAGACGTTCCA  900
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AAAATTGGTGGTGAATAATGTGGCACAGTGAAACAGG-AGAGACGTTCCA  899

seq1  ATTTATGAACACAAATTTACTCTGCAATTGGAAAACATTAAAGATTCCAC  950
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  ATTTATGAACACAAATTTACTCTGCAATTGGAAAACATT-AAGATTCCAC  948

seq1  AAAGCTTTCTGAAGAAAATGCCTGGAATTATTTATATAAACTTGATCAAA  1000
      ||||||||||||||||||||||||| ||||||||||| ||||||||| ||
seq2  AAAGCTTTCTGAAGAAAATGCCTGG-ATTATTTATAT-AACTTGATCCAA  996

seq1  TGCTTAAATGTTTAGTAACATAACTTTTTGTTTTGTTTTGTTTTTGTTGT  1050
      ||| ||||||||||||| |||| ||||| |||||||    | ||||||||
seq2  TGC-TAAATGTTTAGTACCATACCTTTTGGTTTTGT----TGTTTGTTGT  1041

seq1  TTGTTTTTTCTTAAATTCAG-ATGCAATAATTTTGTTAAAGTTCTTCCAC  1099
         | ||||| ||||||| | |||| |||  |||||||| || || ||| 
seq2  ---TGTTTTCCTAAATTCCGAATGC-ATA--TTTGTTAAGGTCCTCCCA-  1084

seq1  ATTCTTGAAAGCATTTAAAGGGCAGCAAATTAAAGTTATAAAAATTCACA  1149
        |||   |||||||  ||||  | ||   | |||||||||    || ||
seq2  --TCTCTGAAGCATT--AAGGCGACCA---TTAAGTTATAA----TC-CA  1122

seq1  TGAGTGAACAATTTGTCTAGGCATTAAGAAAATAATTTTACTTCAATGGA  1199
      |||||  |||   || |||| |  | |||||| |   |||||||||||||
seq2  TGAGTAGACA---TG-CTAGCC--TTAGAAAAAA---TTACTTCAATGGA  1163