BAC Information

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BAC

Clone NameB6Ng01-037B12
Chromosome6 (Build37)
Map Location 36,209,151 - 36,210,318
singlet/doubletsinglet
Overlap gene9330158H04Rik
Upstream gene1810058I24Rik, Slc13a4, BC064033, 1700065J11Rik, Mtpn, LOC100039312, LOC100039327
Downstream geneChrm2, EG620863, LOC100039370, Ptn, LOC100039514, Dgki, EG665024
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-037B12.bB6Ng01-037B12.g
ACCDH865073DH865074
length1,1521,213
definitionDH865073|Mus musculus domesticus DNA, BAC clone: B6Ng01-037B12, 5' end.DH865074|Mus musculus domesticus DNA, BAC clone: B6Ng01-037B12, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaccatgaggggaatatttcattctcaaaatagtttttttcttcg
tgttatcagttgttctgaatgttagattctctccccccaccccatggtat
caaaaggtaccaaagtatatgattgtgagtggtaaagtagagaaccaaat
ccaggtatttgcagtttttctattttcatctgtgtatgaatttttaattt
aaatgcacgatttaaagcatcaatgaaaacttattgtttcagctgacatg
tttcaacagttcaaccttataatgatcactttttaaaaagtattaaaatt
ttctgggaaaatgactgcatttagatattttacaaattagtgatttctta
tgggtagctactaaatggtgtttgtaatgtctttatcatatggccgactt
catcctttcatgatggtgctgtaactaagctatcctccatgtgagaacag
gcactaaaaagtgtctgtcttctgtgctgttcctcttacatttgctattc
aaatgtattagactataagaaaaagaaaaagaaaacccaaaacaaaataa
aaaccggtgttctgtagtttgaggtctatacttactgctttatgtgcatg
cattcaggtattcttttacaagttagatatgtcacacgttattttattcc
agttttattcctctgttgctttttactgtttgcatttgtgtttggaacat
atctagaaaataatcattcagaataataccatggaattttccctcatttt
ttttcccaaaagttttacagtttcagggcttaaggctaagcctttagaca
gttttgaatttactcactgtggcacaagataaggatactttctttgcata
tggtcatcaagttttttcacataatttataataggactatctctttttcc
agggtatgttctaggcatctttattggaaatcagtggatctgaatggttt
tagttatttccaagctcacaaaaatagacaatagcccattgatatattat
ctatgacagtacttgcattttatgctacagttttagtaaactttgaccag
ttaaacgatgactctagttgtttgccaagatgacttagcggttccatgtc
ccagtgcctccactaaatgaagaagtgtatgtctacttctccaaaaaagt
ca
gaattctcacctgaggaatactgaatggctgagaagcacctgaaaaaatg
ttcaacatccttagtcatcagggaaattcaaatcaaaataacccttacat
tccacctcacaccagtcagaatggctaatatcgaaaattcaggtgacaga
agatgttggcaaggatgcagagaaagaggaacactcctccattgctggtg
ggattgcaagctcgtttaagcactctggaaattagtttggtggttcctct
gaaaattggacatagtactaccagaggatccagaaataccactcctgggc
atatacccagaagatgctccaacatgtaataaggacacatgctccactat
gttcatagcagctttatttatagtggccagaagctggaaagaaaccagat
ttccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaacaatgaatttatgaaattctcagacaa
gtgtatggatctggaggatatcaccctgagtgaggtaacccaatcacaga
agaactcacatgacatgcactcactgataagtagatattagccaagaacc
tacgaatacccaagatacaattcacaaaccacatgaaactcaagaagaag
gaagaccgaagtgtggatagtttgatccttcttagaagggggaacaaaat
aatcatggaaggagttacagtgacaaagtgtgaagcagagactaaaggaa
tgaccatccagagactgcccacctgaggatccattccataaacaaccagc
aaacccagacactatttgtagatgcccacaagagcttgctgacagaagca
tgagatagctgtcttctgagaggatctgtcagtgcctggtaaatacagaa
gtggatgctcacagccatccattggaccaagcacaggctccctaatgaag
gagctagagaaagtacccaaggaacttaaggggtttgccttctcagagaa
gaacaacatatgaactaccagtacctcccagactccctgggaataaacta
ccaccaagaaaaccatggtgggactcatgttctagctgctattagcagaa
atagcctagtagtcatcatgggaagaagagccttgtctggaagctctacc
catgtaaagatgcagtcgaagcttgatggtggaatggctagaacaagggg
gctagggaaggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_36209151_36210318
seq2: B6Ng01-037B12.b_47_1198 (reverse)

seq1  TGACTTTTGTTTGTAGAAGTAGACAATACAACTCTTTCATTTAGTGGAGC  50
      |||||||  |||| |||||||||| |||| |||  |||||||||||||| 
seq2  TGACTTT--TTTGGAGAAGTAGAC-ATAC-ACTTCTTCATTTAGTGGAGG  46

seq1  CAACTGGGACATGGAACAGCTAAAGTCATCTTGGGCAAAACAAACTAGAG  100
      | ||||||||||||||| ||| |||||||||| ||||||   ||||||||
seq2  C-ACTGGGACATGGAACCGCT-AAGTCATCTT-GGCAAA--CAACTAGAG  91

seq1  TCATCGTTTTACCTGGTCAAAGTTTACTAAAAACTGTAGCAATTAAAATG  150
      |||||| |||| |||||||||||||||| ||||||||||||  |||||||
seq2  TCATCG-TTTAACTGGTCAAAGTTTACT-AAAACTGTAGCA--TAAAATG  137

seq1  GCCAAGTACTGTCATAGAT-ATATATCAATGGGCTATGTGTCTATTTTTT  199
        ||||||||||||||||| ||||||||||||||||| |||||| |||||
seq2  --CAAGTACTGTCATAGATAATATATCAATGGGCTAT-TGTCTA-TTTTT  183

seq1  GTGAGCTTGGAAATAACTAAAACCATTCAGATCCACTGATTTCCAATAAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCTTGGAAATAACTAAAACCATTCAGATCCACTGATTTCCAATAAA  233

seq1  GATGCCTAGAACATACCCTGGAAAAAGAGATAGTCCTATTATAAATTATG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCCTAGAACATACCCTGGAAAAAGAGATAGTCCTATTATAAATTATG  283

seq1  TGAAAAAACTTGATGACCATATGCAAAGAAAGTATCCTTATCTTGTGCCA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAAACTTGATGACCATATGCAAAGAAAGTATCCTTATCTTGTGCCA  333

seq1  CAGTGAGTAAATTCAAAACTGTCTAAAGGCTTAGCCTTAAGCCCTGAAAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAGTAAATTCAAAACTGTCTAAAGGCTTAGCCTTAAGCCCTGAAAC  383

seq1  TGTAAAACTTTTGGGAAAAAAAATGAGGGAAAATTCCATGGTATTATTCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAACTTTTGGGAAAAAAAATGAGGGAAAATTCCATGGTATTATTCT  433

seq1  GAATGATTATTTTCTAGATATGTTCCAAACACAAATGCAAACAGTAAAAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGATTATTTTCTAGATATGTTCCAAACACAAATGCAAACAGTAAAAA  483

seq1  GCAACAGAGGAATAAAACTGGAATAAAATAACGTGTGACATATCTAACTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACAGAGGAATAAAACTGGAATAAAATAACGTGTGACATATCTAACTT  533

seq1  GTAAAAGAATACCTGAATGCATGCACATAAAGCAGTAAGTATAGACCTCA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAAGAATACCTGAATGCATGCACATAAAGCAGTAAGTATAGACCTCA  583

seq1  AACTACAGAACACCGGTTTTTATTTTGTTTTGGGTTTTCTTTTTCTTTTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTACAGAACACCGGTTTTTATTTTGTTTTGGGTTTTCTTTTTCTTTTT  633

seq1  CTTATAGTCTAATACATTTGAATAGCAAATGTAAGAGGAACAGCACAGAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATAGTCTAATACATTTGAATAGCAAATGTAAGAGGAACAGCACAGAA  683

seq1  GACAGACACTTTTTAGTGCCTGTTCTCACATGGAGGATAGCTTAGTTACA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGACACTTTTTAGTGCCTGTTCTCACATGGAGGATAGCTTAGTTACA  733

seq1  GCACCATCATGAAAGGATGAAGTCGGCCATATGATAAAGACATTACAAAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCATCATGAAAGGATGAAGTCGGCCATATGATAAAGACATTACAAAC  783

seq1  ACCATTTAGTAGCTACCCATAAGAAATCACTAATTTGTAAAATATCTAAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTTAGTAGCTACCCATAAGAAATCACTAATTTGTAAAATATCTAAA  833

seq1  TGCAGTCATTTTCCCAGAAAATTTTAATACTTTTTAAAAAGTGATCATTA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTCATTTTCCCAGAAAATTTTAATACTTTTTAAAAAGTGATCATTA  883

seq1  TAAGGTTGAACTGTTGAAACATGTCAGCTGAAACAATAAGTTTTCATTGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGTTGAACTGTTGAAACATGTCAGCTGAAACAATAAGTTTTCATTGA  933

seq1  TGCTTTAAATCGTGCATTTAAATTAAAAATTCATACACAGATGAAAATAG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTAAATCGTGCATTTAAATTAAAAATTCATACACAGATGAAAATAG  983

seq1  AAAAACTGCAAATACCTGGATTTGGTTCTCTACTTTACCACTCACAATCA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACTGCAAATACCTGGATTTGGTTCTCTACTTTACCACTCACAATCA  1033

seq1  TATACTTTGGTACCTTTTGATACCATGGGGTGGGGGGAGAGAATCTAACA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTTTGGTACCTTTTGATACCATGGGGTGGGGGGAGAGAATCTAACA  1083

seq1  TTCAGAACAACTGATAACACGAAGAAAAAAACTATTTTGAGAATGAAATA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAACAACTGATAACACGAAGAAAAAAACTATTTTGAGAATGAAATA  1133

seq1  TTCCCCTCATGGTGAATTC  1168
      |||||||||||||||||||
seq2  TTCCCCTCATGGTGAATTC  1152