BAC Information

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BAC

Clone NameB6Ng01-037E03
Chromosome6 (Build37)
Map Location 17,742,605 - 17,743,703
singlet/doubletsinglet
Overlap geneSt7
Upstream geneTcfec, EG435881, Tes, EG232599, Cav2, Cav1, Met, Capza2
Downstream geneWnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-037E03.bB6Ng01-037E03.g
ACCDH865191DH865192
length1,0891,141
definitionDH865191|Mus musculus domesticus DNA, BAC clone: B6Ng01-037E03, 5' end.DH865192|Mus musculus domesticus DNA, BAC clone: B6Ng01-037E03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttcccaatcctggctcccacccactagccttgccctactagaa
ggaattagctcttcctggagcgatcccaagaagtgacaaatcaaacagtc
tcaatgtgataattaaactgctggctcacaagactagatagactaggttg
tcaatggacttcgcatttgatcccatgtccaagcaaaaataatgttccac
atttagcttcaaaatctgaattatccaatatgatgtctagaaaaaataaa
taatcaagagtaaaaaaatgcaaactaaaagtttttctaagaggagacaa
caccaagtacaaaacatgactttggaagaacccagcatttctgaaatcaa
aatgtttattaccaagtagatgatgactaatttagcttggtttctagctg
aaatgagaaaaaatacttagctgttatcacataggtcattttcttttttt
gcatgtttgttgtcaggacatagcaattatatagaatagtgggcttcgct
gctgcattttcatatgtataaaacataccttaagtgtatccaccctgtct
cacacacacacacgcgcgcgcgcgcacacacgtgctttaacttcctagaa
gctcctcttccataaagatttcaaattaatctagtctcttgctatttcct
ctattgcagaatctctatgtaagccatttagaagatatgcaatgacatca
gatgaaatccctcaaaagagaccgtcaatgcctgttgatccatagaacat
tttaaagaatgcattaatatcaatgtgtttttctccactcaaatccattt
gattacttcaaataattattcctccaggaattatgaatttgaaaaaaatc
ccctattaagtgagaattatgtttatgttgtctggacataatgcatatat
actcttattctgaacataggatgccaggtatcaaacagaggagtattatc
aaggagaattatcaatattctaaccttaaatttactggtaggttttcaga
acactaaatacgttataagcattttgttttttttcattatgcttagaatt
gtgcttgaagcatttggcagctaaagcaaaatgcactcc
gaattctctgtttagatctgtaccctatttttaattggattatttggttt
gttgatctctagtttcttgaatttttttatgtactttggatattcatttg
ctatcagatgtcaagttagtaaaaatattgttttttattctgtaagctgt
agctttgtccaattgatggtatcctttgccttatggaagcttttcagttt
aatgacatgccatttattaatagttgatcttagtgcctgggatacctgtg
ttctgttcacaacgttctgtctcctgtactgatgtgctcaaggcctcctc
actttctctgccgtcaggctcagtgtgtctagttttatgttgagggtttt
catccattggatgtgagttctgtcaagggatataaatatatggatctatt
tgcatcttgtacatgcagacacccagtttaatcagcattatttattgaaa
atgtcttctttttttttccctcccagggtatatttctgacttctttatca
aaaattaggtgtccctagatatgtgaacttaggtctgggtctttttgttt
gaagcaatgtggattttggaaatgtggaaagcaggaatgctttaagtggg
gtttactgggcagtactagcagaagcatggaaggtggagtttctgagggt
gatttaaactgtgtaactgtagctcaagaaatttcagagattttatccgt
tatgaccattgcaagaagcatggcagcctgtagtcaggcatggtgctgga
gaaggagctgagagttctacatcttgatctgaaggcagcagcaagagaga
ctgactattctaaggaagccaggaggatggtcttttctgcactgggcaaa
gcttcaaagcccacactcacagtgatgtacttcttccacaagacacacct
acttcacaaggcacactcctagtagtgccaacttacatgggccaagcatg
atcaaaccaccacatagacactgtttaaattgactttatcacaaatatta
ttttccccacctaggggattgaaatttgtgggcaaatagtcgggctggca
tcttgtcctctaagactgaaaacatgtgagaaatctgatgcttgttttca
aaatatatattactggctgtgtttgtgggagcgtgtgggtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_17742605_17743703
seq2: B6Ng01-037E03.b_47_1135 (reverse)

seq1  GGAGCTGCATTTTGCTTTTAGGCTGCCAAATGCTTCAAGCCACATGTCTA  50
      |||| |||||||||||||   |||||||||||||||||| ||||  ||||
seq2  GGAG-TGCATTTTGCTTT--AGCTGCCAAATGCTTCAAG-CACAATTCTA  46

seq1  AGCATAATGAAAATAAAACAAAATGCTTATTACGTATTTAGTTGTTCTGG  100
      ||||||||||||| |||||||||||||||| |||||||||| |||||| |
seq2  AGCATAATGAAAA-AAAACAAAATGCTTATAACGTATTTAG-TGTTCT-G  93

seq1  AAAACCTACCAGTAAATTTTAAAGTTTAGAATATTGATAATTCTCCTTGA  150
      |||||||||||||||||||  ||| |||||||||||||||||||||||||
seq2  AAAACCTACCAGTAAATTT--AAGGTTAGAATATTGATAATTCTCCTTGA  141

seq1  TAATACTCCTCTGTTTGATACCTGGCATCCTATGTTCAGAATAAGAGTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATACTCCTCTGTTTGATACCTGGCATCCTATGTTCAGAATAAGAGTAT  191

seq1  ATATGCATTAATGTCCAGACAACATAAACATAATTCTCACTTAATAGGGG  250
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCATT-ATGTCCAGACAACATAAACATAATTCTCACTTAATAGGGG  240

seq1  ATTTTTTTCAAATTCATAATTCCTGGAGGAATAATTATTTGAAGTAATCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTCAAATTCATAATTCCTGGAGGAATAATTATTTGAAGTAATCA  290

seq1  AATGGATTTGAGTGGAGAAAAACACATTGATATTAATGCATTCTTTAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGATTTGAGTGGAGAAAAACACATTGATATTAATGCATTCTTTAAAA  340

seq1  TGTTCTATGGATCAACAGGCATTGACGGTCTCTTTTGAGGGATTTCATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTATGGATCAACAGGCATTGACGGTCTCTTTTGAGGGATTTCATCT  390

seq1  GATGTCATTGCATATCTTCTAAATGGCTTACATAGAGATTCTGCAATAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTCATTGCATATCTTCTAAATGGCTTACATAGAGATTCTGCAATAGA  440

seq1  GGAAATAGCAAGAGACTAGATTAATTTGAAATCTTTATGGAAGAGGAGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATAGCAAGAGACTAGATTAATTTGAAATCTTTATGGAAGAGGAGCT  490

seq1  TCTAGGAAGTTAAAGCACGTGTGTGCGCGCGCGCGCGTGTGTGTGTGTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGAAGTTAAAGCACGTGTGTGCGCGCGCGCGCGTGTGTGTGTGTGA  540

seq1  GACAGGGTGGATACACTTAAGGTATGTTTTATACATATGAAAATGCAGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGGTGGATACACTTAAGGTATGTTTTATACATATGAAAATGCAGCA  590

seq1  GCGAAGCCCACTATTCTATATAATTGCTATGTCCTGACAACAAACATGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGAAGCCCACTATTCTATATAATTGCTATGTCCTGACAACAAACATGCA  640

seq1  AAAAAAGAAAATGACCTATGTGATAACAGCTAAGTATTTTTTCTCATTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGAAAATGACCTATGTGATAACAGCTAAGTATTTTTTCTCATTTC  690

seq1  AGCTAGAAACCAAGCTAAATTAGTCATCATCTACTTGGTAATAAACATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAGAAACCAAGCTAAATTAGTCATCATCTACTTGGTAATAAACATTT  740

seq1  TGATTTCAGAAATGCTGGGTTCTTCCAAAGTCATGTTTTGTACTTGGTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTCAGAAATGCTGGGTTCTTCCAAAGTCATGTTTTGTACTTGGTGT  790

seq1  TGTCTCCTCTTAGAAAAACTTTTAGTTTGCATTTTTTTACTCTTGATTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCCTCTTAGAAAAACTTTTAGTTTGCATTTTTTTACTCTTGATTAT  840

seq1  TTATTTTTTCTAGACATCATATTGGATAATTCAGATTTTGAAGCTAAATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTTCTAGACATCATATTGGATAATTCAGATTTTGAAGCTAAATG  890

seq1  TGGAACATTATTTTTGCTTGGACATGGGATCAAATGCGAAGTCCATTGAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACATTATTTTTGCTTGGACATGGGATCAAATGCGAAGTCCATTGAC  940

seq1  AACCTAGTCTATCTAGTCTTGTGAGCCAGCAGTTTAATTATCACATTGAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTAGTCTATCTAGTCTTGTGAGCCAGCAGTTTAATTATCACATTGAG  990

seq1  ACTGTTTGATTTGTCACTTCTTGGGATCGCTCCAGGAAGAGCTAATTCCT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTTGATTTGTCACTTCTTGGGATCGCTCCAGGAAGAGCTAATTCCT  1040

seq1  TCTAGTAGGGCAAGGCTAGTGGGTGGGAGCCAGGATTGGGAAAGAATTC  1099
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGTAGGGCAAGGCTAGTGGGTGGGAGCCAGGATTGGGAAAGAATTC  1089