BAC Information

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BAC

Clone NameB6Ng01-037E06
Chromosome6 (Build37)
Map Location 3,409,364 - 3,409,881
singlet/doubletsinglet
Overlap geneAI987662
Upstream geneLOC100039885, LOC100039896, LOC100040185, EG667335, Samd9l
Downstream geneCcdc132, Calcr, LOC100039942, Tfpi2, Gngt1, Gng11, 4930528H21Rik, Bet1, LOC667381, LOC100039965
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-037E06.g
ACCDH865197
length526
definitionDH865197|Mus musculus domesticus DNA, BAC clone: B6Ng01-037E06, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tgtctctgtagctagctaattcactttgggaatggtgaacagggctgatc
cagcatcttcctattcaaaaaaaaaatcttcaaatttaatagcacataga
gaaaatcataagcaaccaggaaacaaaaaccatctcatctacagccaaca
tttattcttgaaagaatgtatatttatgaaaggtttttgataagcaaact
ggagtctacaaagttgtgaaatccttacaagactgggcattattgagtcc
ttcttaccgggagccagcaaagaccctagaaagagttgtggatttatgta
aataagtacaaaacaagtttttgttgaaaagacacaaactatttgattta
ttttttcaaaaaaaatttgggataggtagaataaatctgtgtccaaaaca
aactttctgacctgttggcttattgattgtatgagttaaagggatggctt
attgtttggtgcattagaggtgctgtttcctttccatcttttaaaaagaa
ggtataaaaagagggaaatagggtta
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_3409364_3409881
seq2: B6Ng01-037E06.g_85_601

seq1  AGCTAGCTAATTCACTTTGGGAACGGGGAACAGGGCAGAGCCAGCAACTT  50
      ||||||||||||||||||||||| || ||||||||| || |||||| |||
seq2  AGCTAGCTAATTCACTTTGGGAATGGTGAACAGGGCTGATCCAGCATCTT  50

seq1  CCTATTCAAAAAAAAAATCTTCAAATTTAATAGCACATAGAGAAAATCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTCAAAAAAAAAATCTTCAAATTTAATAGCACATAGAGAAAATCAT  100

seq1  AAGCAACCAGGAAACAAAAACCATCTCATCTACAGCCAACATTTATTCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAACCAGGAAACAAAAACCATCTCATCTACAGCCAACATTTATTCTT  150

seq1  GAAAGAATGTATATTTATGAAAGGTTTTTGATAAGCAAACTGGAGTCTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAATGTATATTTATGAAAGGTTTTTGATAAGCAAACTGGAGTCTAC  200

seq1  AAAGTTGTGAAATCCTTACAAGACTGGGCATTATTGAGTCCTTCTTACCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTGTGAAATCCTTACAAGACTGGGCATTATTGAGTCCTTCTTACCG  250

seq1  GGAGCCAGCAAAGACCCTAGAAAGAGTTGTGGATTTATGTAAATAAGTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCCAGCAAAGACCCTAGAAAGAGTTGTGGATTTATGTAAATAAGTAC  300

seq1  AAAACAAGTTTTTGTTGAAAAGACACAAACTATTTGATTTATTTTTTCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAGTTTTTGTTGAAAAGACACAAACTATTTGATTTATTTTTTCAA  350

seq1  AAAAAATTTGGGATAGGTAGAATAAATCTGTGTCCAAAACAAACTTTCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATTTGGGATAGGTAGAATAAATCTGTGTCCAAAACAAACTTTCTG  400

seq1  ACCTGTTGGCTTATTGATTGTATGAGTTAAAGGGATGGCTTATTGTTTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTTGGCTTATTGATTGTATGAGTTAAAGGGATGGCTTATTGTTTGG  450

seq1  TGCAGTAGAGGTGCTGTTTCCTTTCACATCTTTTAAAAAGAAGGTATAAA  500
      |||| |||||||||||||||||||| ||||||||||||||||||||||||
seq2  TGCATTAGAGGTGCTGTTTCCTTTC-CATCTTTTAAAAAGAAGGTATAAA  499

seq1  AAGAGGGAAATAGGGTTA  518
      ||||||||||||||||||
seq2  AAGAGGGAAATAGGGTTA  517