BAC Information

Click to search

BAC

Clone NameB6Ng01-038G23
Chromosome6 (Build37)
Map Location 130,222,013 - 130,223,166
singlet/doubletsinglet
Overlap geneLOC100038898, Klra12, Klra10
Upstream geneCd69, 4922502D21Rik, Clec12a, 4933425B16Rik, Clec1b, Clec9a, Clec1a, Clec7a, Olr1, D630042F21Rik, Gabarapl1, Klre1, Klrd1, Klrk1, Klrc3, Klrc2, Klrc1, LOC640755, Klri1, Klri2, Gm156, Klra17, Klra5, LOC667764, Klra6, LOC100038893, LOC100038894, LOC100038895, Klra4, LOC667769, LOC100038897, Klra8, EG654449, Klra9, Klra7
Downstream geneKlra13, Klra3, Klra1, LOC100038902, LOC100038903, LOC625436, EG625473, LOC640779, LOC667793, EG667798, EG625558, LOC625566, EG636947, LOC625628, EG625648, LOC667830, EG434094, Klra2, LOC434095
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-038G23.bB6Ng01-038G23.g
ACCDH865995DH865996
length8321,136
definitionDH865995|Mus musculus domesticus DNA, BAC clone: B6Ng01-038G23, 5' end.DH865996|Mus musculus domesticus DNA, BAC clone: B6Ng01-038G23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaacagagaaatattgaatgcccaagaagcacattaacaaaca
ttcaaagttcttagccactagggaaatgctagtcaaaacaaacctgagat
catgtcttaccccaataggaatggctaagttaaaaaagttagtgatagca
catgctgacaaggatatgaagaaaggggaacactactacagtgatgatgg
ggggaccacttgtagaaatcaatttggtggtttcttaggatactggtaat
agttctatctcaagaaacagttatactactccagggcatatactcaaaga
ttctccaccattccaaaaagactcattgtcagatatgttcatagcatttt
tattcataacacccagaaattggaaacatcttagacgtcccttcactgaa
aaatggataaagaaaatgtgctacatctatgcaatggagtactctttagc
tatgaaaaaaatcatcatgaattttgaaggcaaattgatggaacttaaga
atatcatcctaaatgaggtaaccaaatcctaaaatgacattcatagtatg
tattcacttatcagttgatactatacataaaatgcaagtgtacatgatac
cctccacagaacccagtggctggaaaaaagaatgccagaagtaagaatgc
ttgagtctcaattggaatcaggaatggaataatcatagaaggtagatgga
gggagggaactgagtgaaaaattagatcaagggatcaattacggttcaga
aactgttgtgcttcagggagagatgatggcctgatgggaatgagaatgaa
tggaaatatgaaaatgatagggggtggatggg
gaattctctgcttagctcacacattttagatgcaatagaaggaatctatg
tatcagtcaaaaaatgataaatctaaaaaaatccagccttaagtaggaat
attttgaggtcaacagcaaccttgtttaaattctgagactcagtaataaa
cacagtcccatatcaaatcatgaaccgaggacacttgaagtttttatttt
aaatagtttattgaactgacctcaatttgatataaataggaagtcaattt
agaaaatgaatatgatgagactgagtggtgggaggataggacagcagaga
gtgagatacgggtggtaggaactcttcctacttgttctctcatccaacat
agagaaatttcatgataagctacattgtttcctatacagaaattccttca
acgccatgttattccagagagttactggattggattgtcttatgacaaga
aaaaaaaggaatgggcatggattgacaatggcccatctaaactgtgagtt
tctgatcccttcagactctaaccctcccttggggattgagagggttgtct
gcaaaggcttttctccatttctcacggttttcctcattttctatggagct
cagaagtaaggacaagttgtataaggcagttcctgatcaagtgttacaaa
aggaagatatatagttgaggagttgaccaaaagtgccttactattgcata
catctaaggatggtgtgttctaacatgggaagggcactagaccgtcaaga
acttaagatggtgtaatgtgagggaatggtcatgacagatacaatgagtc
tgagtataacagatattcatttaacatttttattgttgttagcttatatt
atttacagttatttataaatataagtacatgtttatatatacatacatat
gaatgctttccttccatttaaaggtgtgttgtgtgaatctcaagtttatt
ttttatctacatctgtagaaatctgtttactgataactttctaataatat
gacttttcttagtacaaaatatacatcaataatatatggacatattctgc
ctctactgccatctcaaattcttaacatgtccctagaaactctactacaa
taacgtccagtgcttggttgtaggcatgactggaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_130222013_130223166
seq2: B6Ng01-038G23.g_67_1202 (reverse)

seq1  GTTCCAGTGCATGGCCTACAACCATGCACCTGTGGACTGTTAAT-TAGTA  49
      |||||||| ||| ||||||||||| ||||   ||||| |||| | |||||
seq2  GTTCCAGT-CAT-GCCTACAACCAAGCAC---TGGAC-GTTATTGTAGTA  44

seq1  AGGTAAGAAGTTATCATGGGACATGTTAGAGATTTGAG-TAGCAGTAGGG  98
              |||| ||  |||||||||||   ||||||| | ||||||| |
seq2  -------GAGTT-TCTAGGGACATGTTAAGAATTTGAGATGGCAGTAGAG  86

seq1  GCAG-ATATGTTCATATATTATTTGATGTATATATGGTACTAAAGAAAAA  147
      |||| |||||| ||||||||| ||||||||||| | |||||||   ||||
seq2  GCAGAATATGTCCATATATTA-TTGATGTATATTTTGTACTAA--GAAAA  133

seq1  GTCATATTATTAAGAAAGTTAATCAGTAAACAGATTTCTACCAGATTGTA  197
      ||||||||||| |||||||| ||||||||||||||||||| |||| ||||
seq2  GTCATATTATT-AGAAAGTT-ATCAGTAAACAGATTTCTA-CAGA-TGTA  179

seq1  GATAAAAAATAAACTTGAGATTCACACAACACACCTTTAAATGGAAGGAA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAAAAATAAACTTGAGATTCACACAACACACCTTTAAATGGAAGGAA  229

seq1  AGCATTCATATGTATGTATATATAAACATGTACTTATATTTATAAATAAC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTCATATGTATGTATATATAAACATGTACTTATATTTATAAATAAC  279

seq1  TGTAAATAATATAAGCTAACAACAATAAAAATGTTAAATGAATATCTGTT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAATAATATAAGCTAACAACAATAAAAATGTTAAATGAATATCTGTT  329

seq1  ATACTCAGACTCATTGTATCTGTCATGACCATTCCCTCACATTACACCAT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTCAGACTCATTGTATCTGTCATGACCATTCCCTCACATTACACCAT  379

seq1  CTTAAGTTCTTGACGGTCTAGTGCCCTTCCCATGTTAGAACACACCATCC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGTTCTTGACGGTCTAGTGCCCTTCCCATGTTAGAACACACCATCC  429

seq1  TTAGATGTATGCAATAGTAAGGCACTTTTGGTCAACTCCTCAACTATATA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATGTATGCAATAGTAAGGCACTTTTGGTCAACTCCTCAACTATATA  479

seq1  TCTTCCTTTTGTAACACTTGATCAGGAACTGCCTTATACAACTTGTCCTT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTTTTGTAACACTTGATCAGGAACTGCCTTATACAACTTGTCCTT  529

seq1  ACTTCTGAGCTCCATAGAAAATGAGGAAAACCGTGAGAAATGGAGAAAAG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTGAGCTCCATAGAAAATGAGGAAAACCGTGAGAAATGGAGAAAAG  579

seq1  CCTTTGCAGACAACCCTCTCAATCCCCAAGGGAGGGTTAGAGTCTGAAGG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGCAGACAACCCTCTCAATCCCCAAGGGAGGGTTAGAGTCTGAAGG  629

seq1  GATCAGAAACTCACAGTTTAGATGGGCCATTGTCAATCCATGCCCATTCC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAGAAACTCACAGTTTAGATGGGCCATTGTCAATCCATGCCCATTCC  679

seq1  TTTTTTTTCTTGTCATAAGACAATCCAATCCAGTAACTCTCTGGAATAAC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTCTTGTCATAAGACAATCCAATCCAGTAACTCTCTGGAATAAC  729

seq1  ATGGCGTTGAAGGAATTTCTGTATAGGAAACAATGTAGCTTATCATGAAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCGTTGAAGGAATTTCTGTATAGGAAACAATGTAGCTTATCATGAAA  779

seq1  TTTCTCTATGTTGGATGAGAGAACAAGTAGGAAGAGTTCCTACCACCCGT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTATGTTGGATGAGAGAACAAGTAGGAAGAGTTCCTACCACCCGT  829

seq1  ATCTCACTCTCTGCTGTCCTATCCTCCCACCACTCAGTCTCATCATATTC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCACTCTCTGCTGTCCTATCCTCCCACCACTCAGTCTCATCATATTC  879

seq1  ATTTTCTAAATTGACTTCCTATTTATATCAAATTGAGGTCAGTTCAATAA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTAAATTGACTTCCTATTTATATCAAATTGAGGTCAGTTCAATAA  929

seq1  ACTATTTAAAATAAAAACTTCAAGTGTCCTCGGTTCATGATTTGATATGG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTTAAAATAAAAACTTCAAGTGTCCTCGGTTCATGATTTGATATGG  979

seq1  GACTGTGTTTATTACTGAGTCTCAGAATTTAAACAAGGTTGCTGTTGACC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTGTTTATTACTGAGTCTCAGAATTTAAACAAGGTTGCTGTTGACC  1029

seq1  TCAAAATATTCCTACTTAAGGCTGGATTTTTTTAGATTTATCATTTTTTG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAATATTCCTACTTAAGGCTGGATTTTTTTAGATTTATCATTTTTTG  1079

seq1  ACTGATACATAGATTCCTTCTATTGCATCTAAAATGTGTGAGCTAAGCAG  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATACATAGATTCCTTCTATTGCATCTAAAATGTGTGAGCTAAGCAG  1129

seq1  AGAATTC  1154
      |||||||
seq2  AGAATTC  1136