BAC Information

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BAC

Clone NameB6Ng01-038K15
Chromosome6 (Build37)
Map Location 18,835,386 - 18,835,968
singlet/doubletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-038K15.bB6Ng01-038K15.g
ACCDH866156DH866157
length9121,226
definitionDH866156|Mus musculus domesticus DNA, BAC clone: B6Ng01-038K15, 5' end.DH866157|Mus musculus domesticus DNA, BAC clone: B6Ng01-038K15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagttctgagccccattttttaatggggttgttcgatt
ttctgaagttcaccttcttgagttctttatatatgttggatattagcccc
ctatctgatttaggataggtaaagatactttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacatgccattgctgtt
ctgttcaggaatttctcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttctttga
tccacttagatttgaccttagtacaaggagataagtatggatctattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttttccactggatggttttagctcccttgtcgaagatcaagtg
accataggtgtgtgggttcatttctgggtcttcaattctattccattggt
ctacttgtctgtttctataccagtaccatgcagtttttatcacaattgct
ctgtagtaaagctttaggtcaggcatggtgactccaccagaggttctttt
atccttgagaagactttttgctatcctaggttttttgttattctagatga
atttgcaaattgctccttctaattcgttgaagaattgagttggaattttg
atgaggattgcattgaatctgtagattgcttttggcaagatagccatttt
tacaatgttgatcctgccaatccatgagcatgggagatctttccatcttc
tgagatcttctttattttctttcttcagagatttgaagttttatcataca
gatctttcacct

gaattctttgtttagctctgagccccatttttaaatggggttatttgatt
ttctggagtccatcgtcttgagttctttatatatattggatattagtccc
ctacctgatttaggataagtaaagatcctttcccaatctgttggtgtcct
ttttgtcttattgacggtgtcttttgccttacagaagctttgaagtttca
tgaagtcccatttgtcaattctcgatcttacacacaagcaattgctgttc
tattcaggaatttttcccctgtgcccatatcttcgaggcttttccccaca
ttctcctctataagtttcagtgtctctggttttatgtggagttccttgat
ccacttagatttgaccttagtataaggagataggaatggatcaattcgca
ttcttcttcagagcagccttatttataatagccagaagctggaaagaacc
cagatgcccctcaacagaggaatggatacaaaaaatgtggtacatttaca
caatggagtactactcagctattaaaaagaattaatttatgaaattccta
ggcaaatggttggatctggagggcatcatcctgagtgaggtaaccaaatc
acaaaagaactcaaatgatatgtactcactgattagtggatattagccca
gaaacttagaatacccaagatataagatacaatgtgcaaaacacatgaaa
ctcaagaagaacgaagacagaagtgtggacactttgccccttcttagaaa
tgagaacaaaaaaacccatggaaggacttacagagacacagtttggagct
gtgtcaaaaggatggaccatctagtgttgccatatccagggatccattcc
ctaaatcagctttccaaaccccgaccccatggcatacactagcaagattt
tgctgaaagggccctgatatagctgtctcttgtagactatgccggggcct
aaaaatacagaagtggatgctcacagtcagctatggatggattcataggg
ccctaatggaggagctagagaaagtacccaaggagctaaggggtctgcac
cctattggttgatcaacattatgtactatcagtccccgattcttgatcct
tgcctgctattgatcaaagagtgcctagtcggcctcctggtaggagccgc
ccatttgcactgtaccttcattggcctgtatccggactcgaatcatgtag
cgatgagtgtgttggaacgtactaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835386_18835968
seq2: B6Ng01-038K15.b_47_629 (reverse)

seq1  CTGCATGGTACTGGTATAGAGACAGACAAGTAGACCAATGGAATAGAATT  50
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CTGCATGGTACTGGTATAGAAACAGACAAGTAGACCAATGGAATAGAATT  50

seq1  GAAGACCCAGAGATGAACCCACACACCTATGGTCACTTGATCTTCGACAA  100
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GAAGACCCAGAAATGAACCCACACACCTATGGTCACTTGATCTTCGACAA  100

seq1  GGGAGCTAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGT  150
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GGGAGCTAAAACCATCCAGTGGAA-AAAGACAGCATTTTCAACAATTGGT  149

seq1  GCTGGCACAACTGGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATAC  200
      |||||||||||||||||||||| |||||||||||| |||| |||||||||
seq2  GCTGGCACAACTGGTTGTTATCATGTAGAAGAATGCGAATAGATCCATAC  199

seq1  TTATCTCCATGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACAT  250
      |||||||| ||||||||||||||||||||||||||||| |||||||||||
seq2  TTATCTCCTTGTACTAAGGTCAAATCTAAGTGGATCAAAGAACTTCACAT  249

seq1  AAAACCAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTG  299

seq1  AAGATATGGGCAGAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGT  349
      |||||||||||| |||||| || ||||||||||||||||||||||| |||
seq2  AAGATATGGGCACAGGGGAGAAATTCCTGAACAGAACAGCAATGGCATGT  349

seq1  GCTGTGAGGTAGAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTT  399
      ||||| || | |||||| ||||||||||||||||||||||||||||||||
seq2  GCTGTAAGATCGAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTT  399

seq1  CTGCAAGGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAAGGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATT  449

seq1  GGGAAAGGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAAC  499
      ||||||| ||||||||||||||||||||||||||||| ||||||||||||
seq2  GGGAAAGTATCTTTACCTATCCTAAATCAGATAGGGGGCTAATATCCAAC  499

seq1  ATATATAAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCAT  549
      |||||||||||||||||||||||| ||||||||||||| || ||||||||
seq2  ATATATAAAGAACTCAAGAAGGTGAACTTCAGAAAATCGAACAACCCCAT  549

seq1  TAATAAATGGGGCTCAGAACTGAACAAAGAATTC  583
      ||| ||||||||||||||||||||||||||||||
seq2  TAAAAAATGGGGCTCAGAACTGAACAAAGAATTC  583


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