BAC Information

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BAC

Clone NameB6Ng01-038L03
Chromosome6 (Build37)7 (Build37)
Map Location 18,835,442 - 18,835,96861,089,141 - 61,089,651
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-038L03.bB6Ng01-038L03.g
ACCDH866179DH866180
length998505
definitionDH866179|Mus musculus domesticus DNA, BAC clone: B6Ng01-038L03, 5' end.DH866180|Mus musculus domesticus DNA, BAC clone: B6Ng01-038L03, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,442 - 18,835,968)(61,089,141 - 61,089,651)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcgattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctggatcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagattgaagtttttatcatac
agatctttcacctccttagttagagtcacgccaaatattttatattattt
gtgactattgagaaggtgttgtttccctaatttctttttcagcctgtt
aaataacaaagcaagtgatcgttaaaagtcagggaaaaagcagatagcaa
agggtggcagaagaaagcatgactttcccagggaagtgacagatgtggca
caaacgaagaagatctcatcaacactgataacaagagatccagaccccaa
aaggaaaaggagcacaagggactgcacaaagctgaggtgcagctcttcct
ccatgtgcctcctggaagtcaggcagaaactgagcaggcaacactgtcat
ttgtccagtgtccagctttacagtcccttcttggaaccttacccttcact
gaagccaacacagatgtttgcacttttaccatcatatttcctatctctaa
cttggacttttggtgaaggattgaaaattagcatccagatggtactgagg
gagagagaggaagtgagggaagagagaaagagaagagcagaaggaagagg
aagaggggaaaactgagaaagggaaggagaggaggagagaggaagagaag
ggaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835442_18835968
seq2: B6Ng01-038L03.b_46_573 (reverse)

seq1  CCAGAGATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50

seq1  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  100

seq1  ACAACTGGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCT  150
      |||||||||||||||| |||||||||||| ||||||||||||||||||||
seq2  ACAACTGGTTGTTATCGTGTAGAAGAATGCGAATCGATCCATACTTATCT  150

seq1  CCATGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  200
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  200

seq1  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250

seq1  TGGGCAGAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTG  299
      |||||| ||||||||| ||||||||||||||||||||||| |||||||| 
seq2  TGGGCACAGGGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTA  300

seq1  AGGTAGAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  349
      || | |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCGAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  350

seq1  GGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAA  400

seq1  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  450

seq1  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAAAAA  500

seq1  ATGGGGCTCAGAACTGAACAAAGAATTC  527
      ||||||||||||||||||||||||||||
seq2  ATGGGGCTCAGAACTGAACAAAGAATTC  528

seq1: chr7_61089141_61089651
seq2: B6Ng01-038L03.g_68_578

seq1  GAATTCAAATAACAAAGCAAGTGATCGTTAAAAGTCAGGGAAAAAGCAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATAACAAAGCAAGTGATCGTTAAAAGTCAGGGAAAAAGCAGA  50

seq1  TAGCAAAGGGTGGCAGAAGAAAGCATGACTTTCCCAGGGAAGTGACAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAAAGGGTGGCAGAAGAAAGCATGACTTTCCCAGGGAAGTGACAGAT  100

seq1  GTGGCACAAACGAAGAAGATCTCATCAACACTGATAACAAGAGATCCAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCACAAACGAAGAAGATCTCATCAACACTGATAACAAGAGATCCAGA  150

seq1  CCCCAAAAGGAAAAGGAGCACAAGGGACTGCACAAAGCTGAGGTGCAGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAAAAGGAAAAGGAGCACAAGGGACTGCACAAAGCTGAGGTGCAGCT  200

seq1  CTTCCTCCATGTGCCTCCTGGAAGTCAGGCAGAAACTGAGCAGGCAACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTCCATGTGCCTCCTGGAAGTCAGGCAGAAACTGAGCAGGCAACAC  250

seq1  TGTCATTTGTCCAGTGTCCAGCTTTACAGTCCCTTCTTGGAACCTTACCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATTTGTCCAGTGTCCAGCTTTACAGTCCCTTCTTGGAACCTTACCC  300

seq1  TTCACTGAAGCCAACACAGATGTTTGCACTTTTACCATCATATTTCCTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTGAAGCCAACACAGATGTTTGCACTTTTACCATCATATTTCCTAT  350

seq1  CTCTAACTTGGACTTTTGGTGAAGGATTGAAAATTAGCATCCAGATGGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAACTTGGACTTTTGGTGAAGGATTGAAAATTAGCATCCAGATGGTA  400

seq1  CTGAGGGAGAGAGAGGAAGTGAGGGAAGAGAGAAAGAGAAGAGCAGAAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGGAGAGAGAGGAAGTGAGGGAAGAGAGAAAGAGAAGAGCAGAAGG  450

seq1  AAGAGGAAGAGGGGAAAACTGAGAAAGGGAAGGAGAGGAGGAGAGAGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGAAGAGGGGAAAACTGAGAAAGGGAAGGAGAGGAGGAGAGAGGAA  500

seq1  GAGAAGGGAAG  511
      |||||||||||
seq2  GAGAAGGGAAG  511