BAC Information

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BAC

Clone NameB6Ng01-040B19
Chromosome6 (Build37)X (Build37)
Map Location 18,835,887 - 18,835,968141,696,146 - 141,697,273
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-040B19.bB6Ng01-040B19.g
ACCDH867178DH867179
length821,118
definitionDH867178|Mus musculus domesticus DNA, BAC clone: B6Ng01-040B19, 5' end.DH867179|Mus musculus domesticus DNA, BAC clone: B6Ng01-040B19, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,887 - 18,835,968)(141,696,146 - 141,697,273)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatat
gaattctcactttccaaactaaacagctccaaaaatgtataaaggggaag
caatggtattaggaataaagaacagaagaggagaaagacaggaggtagaa
gaaaagcatgagcaaacattacaaacactactggtgccctcctttctgag
aacaggaaggaaactggctatatttttgcagagcatacataaagacagtc
tttatctggacaaagaccctaatgggaactgaaagaggagtgagctcttt
ttcttctctcacgattgtattaaaagtgtaacttcatcatctggctccta
atcagcccaagaatgaggtcagcaagtgcctagtggtttatttttatttc
tgatatcatcttcctgatcccagagggagcccagcatggcttatttaaga
ccacacgatgtggcagttaaactcgtgtgtgcctgagggaccttccctat
ccgttgtaggggggagagaacaactaagtggaatatcacatttccacggc
ccttttttactagccagaaagcagttgagagttcaatcataggccacatc
tgatgaatacattgaacaattactcctcacccattcatcagcatttaaca
gctctagaattctagctgaacacatgactttgcaaagggcactgcagacc
tgcgccatggagaaacacgacctatggtttccaagctctccatgatctta
ggacatgacaaatcaagaaggcatctgattgctacttgatcaatcactcc
aaacgtggctcaaaatagcagccatgtattagctcatagttctgtagtgc
aaaagtgctggatggcctgtgaagcctctccatttagcatctcgaaggcc
agatcaagtcatcagcagagcagcattttcatcagaaggcctggggctct
cagaaagctcaaaaggttagctgtgggagaattcagtttcttacagtacg
agatttctttgctggctgtcagccaataggcactcagttctgagtccagt
agcagttttttctcataaatctcttccatattcaactgatacagcactta
tgccttctcaattggaaaaccgactcactgactttcttccacttcctgcc
accagaatgtgtttaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835887_18835968
seq2: B6Ng01-040B19.b_46_127 (reverse)

seq1  ATATAAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTA  50

seq1  ATAAATGGGGCTCAGAACTGAACAAAGAATTC  82
      | ||||||||||||||||||||||||||||||
seq2  AAAAATGGGGCTCAGAACTGAACAAAGAATTC  82

seq1: chrX_141696146_141697273
seq2: B6Ng01-040B19.g_67_1184

seq1  GAATTCTCACTTTCCAAACTAAACAGCTCCAAAAATGTATAAAGGGGAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACTTTCCAAACTAAACAGCTCCAAAAATGTATAAAGGGGAAG  50

seq1  CAATGGTATTAGGAATAAAGAACAGAAGAGGAGAAAGACAGGAGGTAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGTATTAGGAATAAAGAACAGAAGAGGAGAAAGACAGGAGGTAGAA  100

seq1  GAAAAGCATGAGCAAACATTACAAACACTACTGGTGCCCTCCTTTCTGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGCATGAGCAAACATTACAAACACTACTGGTGCCCTCCTTTCTGAG  150

seq1  AACAGGAAGGAAACTGGCTATATTTTTGCAGAGCATACATAAAGACAGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGAAGGAAACTGGCTATATTTTTGCAGAGCATACATAAAGACAGTC  200

seq1  TTTATCTGGACAAAGACCCTAATGGGAACTGAAAGAGGAGTGAGCTCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCTGGACAAAGACCCTAATGGGAACTGAAAGAGGAGTGAGCTCTTT  250

seq1  TTCTTCTCTCACGATTGTATTAAAAGTGTAACTTCATCATCTGGCTCCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTCTCACGATTGTATTAAAAGTGTAACTTCATCATCTGGCTCCTA  300

seq1  ATCAGCCCAAGAATGAGGTCAGCAAGTGCCTAGTGGTTTATTTTTATTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCCCAAGAATGAGGTCAGCAAGTGCCTAGTGGTTTATTTTTATTTC  350

seq1  TGATATCATCTTCCTGATCCCAGAGGGAGCCCAGCATGGCTTATTTAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATCATCTTCCTGATCCCAGAGGGAGCCCAGCATGGCTTATTTAAGA  400

seq1  CCACACGATGTGGCAGTTAAACTCGTGTGTGCCTGAGGGACCTTCCCTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACGATGTGGCAGTTAAACTCGTGTGTGCCTGAGGGACCTTCCCTAT  450

seq1  CCGTTGTAGGGGGGAGAGAACAACTAAGTGGAATATCACATTTCCACGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTTGTAGGGGGGAGAGAACAACTAAGTGGAATATCACATTTCCACGGC  500

seq1  CCTTTTTTACTAGCCAGAAAGCAGTTGAGAGTTCAATCATAGGCCACATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTTTACTAGCCAGAAAGCAGTTGAGAGTTCAATCATAGGCCACATC  550

seq1  TGATGAATACATTGAACAATTACTCCTCACCCATTCATCAGCATTTAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGAATACATTGAACAATTACTCCTCACCCATTCATCAGCATTTAACA  600

seq1  GCTCTAGAATTCTAGCTGAACACATGACTTTGCAAAGGGCACTGCAGACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTAGAATTCTAGCTGAACACATGACTTTGCAAAGGGCACTGCAGACC  650

seq1  TGCGCCATGGAGAAACACGACCTATGG-TTCCAAGCTCTCCATGATCTTA  699
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TGCGCCATGGAGAAACACGACCTATGGTTTCCAAGCTCTCCATGATCTTA  700

seq1  GGACATGACAAATCAAGAAGGCATCTGATTGCTACTTGATCAATCACTCC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATGACAAATCAAGAAGGCATCTGATTGCTACTTGATCAATCACTCC  750

seq1  AAACGTGGCTCAAAATAGCAGCCATGTATTAGCTCATAGTTCTGTAGTGC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACGTGGCTCAAAATAGCAGCCATGTATTAGCTCATAGTTCTGTAGTGC  800

seq1  AAAAGTGCTGGATGGCCTGTGAAGCCTCTCCATTTAGCATCTCGAAAGGC  849
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AAAAGTGCTGGATGGCCTGTGAAGCCTCTCCATTTAGCATCTCG-AAGGC  849

seq1  CAGAATCAAGTCATCAGCAGAGCAGCATTTTCATCAGAAGGCCTGGGGCT  899
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAG-ATCAAGTCATCAGCAGAGCAGCATTTTCATCAGAAGGCCTGGGGCT  898

seq1  CTCAG-AAGCTCAAAAGGTTAGCTGTGGGAGAATTCAGTTTCTTACAGGT  948
      ||||| ||||||||||||||||||||||||||||||||||||||||| ||
seq2  CTCAGAAAGCTCAAAAGGTTAGCTGTGGGAGAATTCAGTTTCTTACA-GT  947

seq1  ACGAGATTTCTTTGCTGGCTGTCAGCCAATAGGCCACTCAGTTCTGAGTC  998
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ACGAGATTTCTTTGCTGGCTGTCAGCCAATAGG-CACTCAGTTCTGAGTC  996

seq1  CAGTAGCAGTTTTTTCTCATATAATCTCTTCCATATTCAAACTGATAACA  1048
      ||||||||||||||||||||| |||||||||||||||| ||||||| |||
seq2  CAGTAGCAGTTTTTTCTCATA-AATCTCTTCCATATTC-AACTGAT-ACA  1043

seq1  GCACTTTATGCCCTTCTCAATTTGTAAATCTGACTCACTGTATCTTCTTC  1098
      |||| ||||| ||||||||| ||| ||| | ||||||||| |  ||||||
seq2  GCAC-TTATG-CCTTCTCAA-TTGGAAAACCGACTCACTG-ACTTTCTTC  1089

seq1  CACTTCCTGCCACCAGAATGTGTTTTAAGG  1128
      |||||||||||||||||||||| |||||||
seq2  CACTTCCTGCCACCAGAATGTG-TTTAAGG  1118