BAC Information

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BAC

Clone NameB6Ng01-041A17
Chromosome6 (Build37)
Map Location 64,456,032 - 64,456,831
singlet/doubletsinglet
Overlap geneGrid2
Upstream genenone
Downstream geneAtoh1, LOC100041833, LOC667115, Smarcad1, Ptgds2, LOC100042741, LOC100041858, LOC634745, EG667141, C130060K24Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-041A17.b
ACCDH867822
length797
definitionDH867822|Mus musculus domesticus DNA, BAC clone: B6Ng01-041A17, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttatgctcattctaatgtagcaaactgagatttgtgtgtgtgt
cggtgctgtttaattgttgggttttgggaagcttggatttgaacactaca
tttcacaagagctaggtaagcattttacttactatattttcatccccaga
aatgagttttaaattagagatcttaagcccctcttttcagtcatcttttt
ctctatgttctctatctggttcactatgaaactatttattcaggagtaaa
tgactctaataaatctttaattcccaccaatactcccaagggatgtattt
aatataaattctttcttagttagatatttattttttttaattttttaaat
tttattttaattgggtattttcttcatttacatttccaatgctattccaa
aagtcccccataacccccatatgttccctacccacctactcccacttctt
ggaactaatgttcccttgtactaaggcatataaagtttgcaagaccaatg
ggactctctttacactgatggccgactaggacatcttctgatacatatgc
agctagagacacaaactcttgggggtactggttagttcatattgttgttc
cacctaggagttgcatacacctttacctccttgggcactttctcaagctc
ctataagggaagacctgtaatccatctatatcctgactgtgagcatccac
ttctgtgtctgcaatgcacccacataaactcaccaaatacatctatatcc
gggtcctctccccaaaatcttgctagtgcatgccatggcgtcagcct
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_64456032_64456831
seq2: B6Ng01-041A17.b_37_833

seq1  GAATTCTTTATGCTCATTCTACATGTAGCAAAACTGAGATTTGTGTGTGT  50
      ||||||||||||||||||||| ||||||| ||||||||||||||||||||
seq2  GAATTCTTTATGCTCATTCTA-ATGTAGC-AAACTGAGATTTGTGTGTGT  48

seq1  GTCGGTGCTGTTTAATTGTTGGGTTTTGTGAAGCTTGGATTTGAACACGA  100
      |||||||||||||||||||||||||||| ||||||||||||||||||| |
seq2  GTCGGTGCTGTTTAATTGTTGGGTTTTGGGAAGCTTGGATTTGAACACTA  98

seq1  CATTTCACAAAAGCTAAGTAAGCATTTTACTTACTATATTTTCATCCCAA  150
      |||||||||| ||||| ||||||||||||||||||||||||||||||| |
seq2  CATTTCACAAGAGCTAGGTAAGCATTTTACTTACTATATTTTCATCCCCA  148

seq1  GAAATGAGTTTTAAATTAGAGATCTTAAGCCCCTCTTTTCAGTCATCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGAGTTTTAAATTAGAGATCTTAAGCCCCTCTTTTCAGTCATCTTT  198

seq1  TTCTCTATGTTCTCTATCTGGTTCACTATGAAACTATTTATTCAGGAGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTATGTTCTCTATCTGGTTCACTATGAAACTATTTATTCAGGAGTA  248

seq1  AATGACTCTAATAAATCTTTAATTCCCAGCAATACTCCAAAGGGATGTAT  300
      |||||||||||||||||||||||||||| ||||||||| |||||||||||
seq2  AATGACTCTAATAAATCTTTAATTCCCACCAATACTCCCAAGGGATGTAT  298

seq1  TTAATATAAATTCTTTCTTAGTTAGATATTTATTTTTTTTAATTTTTTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATATAAATTCTTTCTTAGTTAGATATTTATTTTTTTTAATTTTTTAA  348

seq1  ATTTTATTTTAATTGGGTATTTTCTTCATTTACATTTCCAATGCTATTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATTTTAATTGGGTATTTTCTTCATTTACATTTCCAATGCTATTCC  398

seq1  AAAAGTCCCCCATAACCCCCATATGTTCCCTACCCACCTACTCCCACTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTCCCCCATAACCCCCATATGTTCCCTACCCACCTACTCCCACTTC  448

seq1  TTGGAACTAGTGTTCCCTTGTACTAAGGCATATAAAGTTTGCAAGACCAA  500
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAACTAATGTTCCCTTGTACTAAGGCATATAAAGTTTGCAAGACCAA  498

seq1  TGGGACTCTCTTTACACTGATGGCCGACTAGGACATCTTCTGATACATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACTCTCTTTACACTGATGGCCGACTAGGACATCTTCTGATACATAT  548

seq1  GCAGCTAGAGACACTAGCTCTTGGGGGTACTGGTTAGTTCATATTGTTGT  600
      |||||||||||||| | |||||||||||||||||||||||||||||||||
seq2  GCAGCTAGAGACACAAACTCTTGGGGGTACTGGTTAGTTCATATTGTTGT  598

seq1  TCCACCTATAGAGTTGCAGACACCTTTACCTCCTTGGGTACTTTCTCAAG  650
      ||||||||  |||||||| ||||||||||||||||||| |||||||||||
seq2  TCCACCTA-GGAGTTGCATACACCTTTACCTCCTTGGGCACTTTCTCAAG  647

seq1  CTCCTATATGGGAGGACCTGTGATCCATCTATTAGCTGACTGTGAGCATC  700
      |||||||| |||| ||||||| ||||||||||   |||||||||||||||
seq2  CTCCTATAAGGGAAGACCTGTAATCCATCTATATCCTGACTGTGAGCATC  697

seq1  CACTTCTGTGTTTGCTAGGCACCAGCATAGACTCACAAGAGACAGCTATA  750
      ||||||||||| ||| | |||||  |||| |||||| | | ||| |||||
seq2  CACTTCTGTGTCTGCAATGCACCCACATAAACTCACCAAATACATCTATA  747

seq1  TCAGGGTCCTTTCAGCAAAATCTTGTTAGTGTATGCAATGGTGTCAGCCT  800
      || ||||||| ||  |||||||||| ||||| |||| |||| ||||||||
seq2  TCCGGGTCCTCTCCCCAAAATCTTGCTAGTGCATGCCATGGCGTCAGCCT  797