BAC Information

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BAC

Clone NameB6Ng01-042G17
Chromosome6 (Build37)15 (Build37)
Map Location 54,597,478 - 54,597,62686,156,591 - 86,156,651
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneCreb5, LOC384386, 1200009O22Rik, Cpvl, LOC666305, Chn2, LOC100042056, Prr15, EG640926, Wipf3, Scrn1, Fkbp14, Plekha8
Downstream geneLOC100041292, 2410066E13Rik, Znrf2, Nod1, A030007L17Rik, Gars, Crhr2, Inmt, C330043M08Rik, Aqp1, Ghrhr, Adcyap1r1, LOC100042219
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-042G17.bB6Ng01-042G17.g
ACCDH868803DH868804
length14961
definitionDH868803|Mus musculus domesticus DNA, BAC clone: B6Ng01-042G17, 5' end.DH868804|Mus musculus domesticus DNA, BAC clone: B6Ng01-042G17, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(54,597,478 - 54,597,626)(86,156,591 - 86,156,651)
sequence
gaattctttctgttacccagctagatgaaagtagatgtgagtctgtgtca
cacagtccagttcctctctgctgtcctggttttgtagcagtacttagaga
gactggctgctgtggggtgggagggaaggggggcaggagggagggagag
tgctgctgctgctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
tgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_54597478_54597626
seq2: B6Ng01-042G17.b_43_191

seq1  GAATTCTTTCTGTTACCCAGCTAGATGAAAGTAGATGTGAGTCTGTGTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTGTTACCCAGCTAGATGAAAGTAGATGTGAGTCTGTGTCA  50

seq1  CACAGTCCAGTTCCTCTCTGCTGTCCTGGTTTTGTAGCAGTACTTAGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTCCAGTTCCTCTCTGCTGTCCTGGTTTTGTAGCAGTACTTAGAGA  100

seq1  GACTGGCTGCTGTGGGGTGGGAGGGAAGGGGGGCAGGAGGGAGGGAGAG  149
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGGCTGCTGTGGGGTGGGAGGGAAGGGGGGCAGGAGGGAGGGAGAG  149

seq1: chr15_86156591_86156651
seq2: B6Ng01-042G17.g_75_135 (reverse)

seq1  ACACACACACACACACACACACACACACACACACACACACACACACACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACACACACACACACACACACAG  50

seq1  CAGCAGCAGCA  61
      |||||||||||
seq2  CAGCAGCAGCA  61