BAC Information

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BAC

Clone NameB6Ng01-042I08
Chromosome6 (Build37)6 (Build37)
Map Location 18,835,452 - 18,835,968109,908,150 - 109,909,122
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-042I08.bB6Ng01-042I08.g
ACCDH868874DH868875
length991973
definitionDH868874|Mus musculus domesticus DNA, BAC clone: B6Ng01-042I08, 5' end.DH868875|Mus musculus domesticus DNA, BAC clone: B6Ng01-042I08, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,452 - 18,835,968)(109,908,150 - 109,909,122)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtagattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctggatcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattcagccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttgcatctt
ctgagatcttctttaatttctttcttcagagatttgaagttttcatcata
cagatctttcacctccttagttagagtcacgccagatattttatattatt
tgtgactattgagaaggtgttgtttccctaatttctttctc
gaattcccctggtagaggtttcttcactaggcccagaggaatagcataat
catgtatttactaaagaacccctggtggtgggtttagcattggatcagag
actagcattgcatcagagcattcacctggctccattttaagtggcaaatg
tgacctggtcccccctttttttttggtgtatgcattctttttgttttgtg
tcactgtaatttggtggatgtgttctcctggttttttgtttttcttctgt
ataaaaaagtctggtgtccgtttggacagtacattcagattcagcactct
ctcgtgcctgtgtctgtctgtcagttctcactgactctatgcccatctgt
ccgagaccccaattcctacggattgaggggggccgactgggcccagtctg
tggcagacaataatcaaacaaaagaaaatatttagcatgttgactgagca
gtcaccgtgtatcagtactgaaggctcttccttttctgtcagaatatctt
cctcaaataacaatgatgagactcagagttggccattatacaaagccaac
cagtgaatcagtgatgccgcttggctttgtattaaagaatatttatcccg
tcttaaatccggaggagaaaatactaagtgtccctacctcataccaccac
cacacacattattagaagacatttaatatgcaaaagaactgctgacagaa
acagaattctaagctttctggaaagacatgaacttgtttctcctgaataa
ccctgtgcgtaagcaaagttctattactcatcagctaatacccagaagac
tcactggagtgtgtgcatctaaccagagtgctgctttagaaggtgaccat
aataaatagtcagtgttgactacttggcagctaatattaatcagtgcctt
ccacaatgtttcctaagagactgtgttacaagtttctgaggtacttagat
ttcagacatggggggttgggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835452_18835968
seq2: B6Ng01-042I08.b_46_563 (reverse)

seq1  ACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATC  50

seq1  CAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTT  100

seq1  GTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCTCCATGTACTA  150
      |||||| |||||||||||| |||||||||||||||||||||| |||||||
seq2  GTTATCGTGTAGAAGAATGCGAATCGATCCATACTTATCTCCTTGTACTA  150

seq1  AGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTG  200

seq1  AAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCAGAGG  250
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGG  250

seq1  GGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTGAGGTAGAGAA  299
      |||||| ||||||||||||||||||||||| |||||||| || | |||||
seq2  GGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAA  300

seq1  TCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGAC  349
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGAC  350

seq1  ACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTAC  400

seq1  CTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCA  450

seq1  AGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAAATGGGGCTCA  499
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCA  500

seq1  GAACTGAACAAAGAATTC  517
      ||||||||||||||||||
seq2  GAACTGAACAAAGAATTC  518

seq1: chr6_109908150_109909122
seq2: B6Ng01-042I08.g_67_1039

seq1  GAATTCCCCTGGTAGAGGTTTCTTCACTAGGCCCAGAGGAATAGCATAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCCTGGTAGAGGTTTCTTCACTAGGCCCAGAGGAATAGCATAAT  50

seq1  CATGTATTTACTAAAGAACCCCTGGTGGTGGGTTTAGCATTGGATCAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTATTTACTAAAGAACCCCTGGTGGTGGGTTTAGCATTGGATCAGAG  100

seq1  ACTAGCATTGCATCAGAGCATTCACCTGGCTCCATTTTAAGTGGCAAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGCATTGCATCAGAGCATTCACCTGGCTCCATTTTAAGTGGCAAATG  150

seq1  TGACCTGGTCCCCCCTTTTTTTTTGGTGTATGCATTCTTTTTGTTTTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTGGTCCCCCCTTTTTTTTTGGTGTATGCATTCTTTTTGTTTTGTG  200

seq1  TCACTGTAATTTGGTGGATGTGTTCTCCTGGTTTTTTGTTTTTCTTCTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGTAATTTGGTGGATGTGTTCTCCTGGTTTTTTGTTTTTCTTCTGT  250

seq1  ATAAAAAAGTCTGGTGTCCGTTTGGACAGTACATTCAGATTCAGCACTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAAAGTCTGGTGTCCGTTTGGACAGTACATTCAGATTCAGCACTCT  300

seq1  CTCGTGCCTGTGTCTGTCTGTCAGTTCTCACTGACTCTATGCCCATCTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGTGCCTGTGTCTGTCTGTCAGTTCTCACTGACTCTATGCCCATCTGT  350

seq1  CCGAGACCCCAATTCCTACGGATTGAGGGGGGCCGACTGGGCCCAGTCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAGACCCCAATTCCTACGGATTGAGGGGGGCCGACTGGGCCCAGTCTG  400

seq1  TGGCAGACAATAATCAAACAAAAGAAAATATTTAGCATGTTGACTGAGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGACAATAATCAAACAAAAGAAAATATTTAGCATGTTGACTGAGCA  450

seq1  GTCACCGTGTATCAGTACTGAAGGCTCTTCCTTTTCTGTCAGAATATCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCGTGTATCAGTACTGAAGGCTCTTCCTTTTCTGTCAGAATATCTT  500

seq1  CCTCAAATAACAATGATGAGACTCAGAGTTGGCCATTATACAAAGCCAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAAATAACAATGATGAGACTCAGAGTTGGCCATTATACAAAGCCAAC  550

seq1  CAGTGAATCAGTGATGCCGCTTGGCTTTGTATTAAAGAATATTTATCCCG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAATCAGTGATGCCGCTTGGCTTTGTATTAAAGAATATTTATCCCG  600

seq1  TCTTAAATCCGGAGGAGAAAATACTAAGTGTCCCTACCTCATACCACCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAAATCCGGAGGAGAAAATACTAAGTGTCCCTACCTCATACCACCAC  650

seq1  CACACACATTATTAGAAGACATTTAATATGCAAAAGAACTGCTGACAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACATTATTAGAAGACATTTAATATGCAAAAGAACTGCTGACAGAA  700

seq1  ACAGAATTCTAAGCTTTCTGGAAAGACATGAACTTGTTTCTCCTGAATAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAATTCTAAGCTTTCTGGAAAGACATGAACTTGTTTCTCCTGAATAA  750

seq1  CCCTGTGCGTAAGCAAAGTTCTATTACTCATCAGCTAATACCCAGAAGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTGCGTAAGCAAAGTTCTATTACTCATCAGCTAATACCCAGAAGAC  800

seq1  TCACTGGAGTGTGTGCATCTAACCAGAGTGCTGCTTTAGAAGGTGACCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGGAGTGTGTGCATCTAACCAGAGTGCTGCTTTAGAAGGTGACCAT  850

seq1  AATAAATAGTCAGTGTTGACTACTTGGCAGCTAATATTAATCAGTGCCTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATAGTCAGTGTTGACTACTTGGCAGCTAATATTAATCAGTGCCTT  900

seq1  CCACAATGTTTCCTAAGAGACTGTGTTACAAGTTTCTGAGGTACTTAGAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAATGTTTCCTAAGAGACTGTGTTACAAGTTTCTGAGGTACTTAGAT  950

seq1  TTCAGACATGGGGGGTGGGGGGG  973
      |||||||||||||||| ||||||
seq2  TTCAGACATGGGGGGTTGGGGGG  973