BAC Information

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BAC

Clone NameB6Ng01-043F07
Chromosome6 (Build37)12 (Build37)
Map Location 18,835,452 - 18,835,96815,399,122 - 15,399,637
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-043F07.bB6Ng01-043F07.g
ACCDH869426DH869427
length929511
definitionDH869426|Mus musculus domesticus DNA, BAC clone: B6Ng01-043F07, 5' end.DH869427|Mus musculus domesticus DNA, BAC clone: B6Ng01-043F07, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,452 - 18,835,968)(15,399,122 - 15,399,637)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ctttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagggtctctggttttatgtgaagttccttga
tccacttagatttgtccttagtacaaggagataagtatggattgatttgc
attcttcttcacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
tacaatgttgatcctgccaatccacgagcatgggagatctttccatattc
tgagatcttccttaatttctttcttcagagatctgaagtttttatcatag
agatctttcacttccttagttagagtcac
agcatcttcattcaatcgtgtttcaaaaaaaatgcttactacagaactgt
atgcataaatattcaacgaacacttttcaaaagctatgtaaattgtcttt
ccaaaatataaacacatgtgagaggagaaaaccaaggactcaggcaaatt
gctgtctttgtgttctctaacaataagcccctatcaggatgtataatgac
attttctgtttgcacagcacctgtttaagtaatcctggactgagaaaaaa
aaaatgccccttacaacagggcctgggcctgtaggtattgagaacaatgg
caaaaagtagctttgaatgttgccaaaccagctttgccatgcctgtgaat
tatgtggaatatatatatgtatatgtatatgtatatgtatatgtgtatat
atatatagatgtatatggggaggggtatatgggggtgtatatagatatat
atatatgtatattcacacacacatcacatcacatttattgtgatttattt
actttaaatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835452_18835968
seq2: B6Ng01-043F07.b_44_561 (reverse)

seq1  ACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATC  50

seq1  CAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTT  100

seq1  GTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCTCCATGTACTA  150
      |||||| || |||||||||  |||| |||||||||||||||| |||||||
seq2  GTTATCGTGAAGAAGAATGCAAATCAATCCATACTTATCTCCTTGTACTA  150

seq1  AGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTG  200
      ||| |||||||||||||||||||||||||||||||||||||||||| |||
seq2  AGGACAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACCCTG  200

seq1  AAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCAGAGG  250
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGG  250

seq1  GGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTGAGGTAGAGAA  299
      |||||| ||||||||||||||||||||||| |||||||| || | |||||
seq2  GGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAA  300

seq1  TCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGAC  349
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGAC  350

seq1  ACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTAC  399
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  ACCGTCAATAAGACAAAGAGACCACCAACAGATTGGGAAAGGATCTTTAC  400

seq1  CTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCA  450

seq1  AGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAAATGGGGCTCA  499
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCA  500

seq1  GAACTGAACAAAGAATTC  517
      ||||||||||||||||||
seq2  GAACTGAACAAAGAATTC  518

seq1: chr12_15399122_15399637
seq2: B6Ng01-043F07.g_66_582 (reverse)

seq1  TCATTTAATGT-AATTAATCACAATAAATGTGATGTGATGTGTGTGTGAA  49
      |||||||| || ||| ||||||||||||||||||||||||||||||||||
seq2  TCATTTAAAGTAAATAAATCACAATAAATGTGATGTGATGTGTGTGTGAA  50

seq1  TATATATATATATATATATATATATATATATATATATATATACACATATA  99
      |||| |||||||||||| |||||| |     |||||    | | ||||||
seq2  TATACATATATATATATCTATATACACCCCCATATACCCCTCCCCATATA  100

seq1  CATATATATATATATACACATATACATATACATATACATATACATATATA  149
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTATATATATATACACATATACATATACATATACATATACATATATA  150

seq1  TATTCCACATAATTCACAGGCATGGCAAAGCTGGTTTGGCAACATTCAAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCACATAATTCACAGGCATGGCAAAGCTGGTTTGGCAACATTCAAA  200

seq1  GCTACTTTTTGCCATTGTTCTCAATACCTACAGGCCCAGGCCCTGTTGTA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACTTTTTGCCATTGTTCTCAATACCTACAGGCCCAGGCCCTGTTGTA  250

seq1  AGGGGCATTTTTTTTTTCTCAGTCCAGGATTACTTAAACAGGTGCTGTGC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGCATTTTTTTTTTCTCAGTCCAGGATTACTTAAACAGGTGCTGTGC  300

seq1  AAACAGAAAATGTCATTATACATCCTGATAGGGGCTTATTGTTAGAGAAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGAAAATGTCATTATACATCCTGATAGGGGCTTATTGTTAGAGAAC  350

seq1  ACAAAGACAGCAATTTGCCTGAGTCCTTGGTTTTCTCCTCTCACATGTGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGACAGCAATTTGCCTGAGTCCTTGGTTTTCTCCTCTCACATGTGT  400

seq1  TTATATTTTGGAAAGACAATTTACATAGCTTTTGAAAAGTGTTCGTTGAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTTTGGAAAGACAATTTACATAGCTTTTGAAAAGTGTTCGTTGAA  450

seq1  TATTTATGCATACAGTTCTGTAGTAAGCATTTTTTTTGAAACACGATTGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATGCATACAGTTCTGTAGTAAGCATTTTTTTTGAAACACGATTGA  500

seq1  ATGAAGATGCTGAATTC  516
      |||||||||||||||||
seq2  ATGAAGATGCTGAATTC  517