BAC Information

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BAC

Clone NameB6Ng01-043P18
Chromosome6 (Build37)7 (Build37)
Map Location 18,835,441 - 18,835,96879,743,292 - 79,744,450
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-043P18.bB6Ng01-043P18.g
ACCDH869876DH869877
length9981,146
definitionDH869876|Mus musculus domesticus DNA, BAC clone: B6Ng01-043P18, 5' end.DH869877|Mus musculus domesticus DNA, BAC clone: B6Ng01-043P18, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,441 - 18,835,968)(79,743,292 - 79,744,450)
sequence
gaattctttgttcagttctgagccccattttttaatggggttgttcgatt
ttctgaagtccttgagttctttatatatgttggatattagccccctatct
gatttaggataggtaaagatcctttcccaatctgttggtggtctttttgt
cttgttgacggtgtcttttgccttgcagaaactttggagtttcattaggt
cccatttgtcaattctcgatcttacagcacatgccattgctgttttgttc
aggaatatttcccctgtgcccatatcttcaaggcttttccccactttctc
ctctataagtttcagtgtctctggttttatgtgaagttctttgatccact
tagatttgaccttagtacaaggagataagtatggatcgattcgcattctt
ctacatgataacaaccagttgtgccagcaccaattgttgaaaatgctgtc
tttcttccactggatggttttagctcccttgtcgaagatcaagtgaccat
aggtgtgtgggttcatttctgggtcttcaattctattccattggtctact
tgtctgtttctataccagtaccatgcagtttttatcacaattgctctgta
gtaaagctttaggtcaggcatggtgattccaccagaggttcttttatcct
tgagaagactttttgctatcctaggttttttgttattccagatgaatttg
caaattgctccttctaattcgttgaagaattgagttggaattttgatggg
gattgcattgaatctgtagattgcttttggcaagatagccatttttacaa
tgttgatcctgccaatccatgagcatgggagatctttccatcttctgaga
tcttctttaatttctttcttcagaaatttgaagtttttatcatacagata
tttcacctccttagttagagtacgccaagatattttatactatttgtgac
tattgagaaggtgttgtttccctaatttctttctcagcctgttattct
gaattcctgtcaaggtttgatgcaatcaatgttttcttaaaaaaataaca
gttcacctatgaacaggagactttccttgaacctacagtaaacacagtga
gagaattatctagtataagaaacagatttaacccagatgtaaatgcatcc
ccagagagccttacaagatatttcagtgtccagtgacttgcaagattctt
gatccatgtcaatcaatcatctgaatgctacagcaacagccatactttat
gggtgttccccatcaatagcaactcaaaataatgaactttcaatactatt
tctcttagattactagtttttaagtatttcagcacttctctctaattttt
aatattcatccaatttcttttgaactaaaaaattcaattaatttgtagct
tgacatttccacatttaactctgacatttaggagttccttgggtaagaat
atgtaaataagatgatggctccaggcttaatccaggaaagaacaagaaac
tacctcactagagtgaatgtcatgagctgttcacttaagtgtgttacact
gcaatggatttacagggccctatggtttccaaaagccttttataaaatta
actaactaacaaacaaacatttaagaactttgcatgtgccagacaccttg
aaagatgctgactctagtccttcataattagcttcatcccatctctccag
gatcatcttccaagactcaaactggaacatcccccaagctactgtaagga
tgatggaagaaattcggagaatgcagggaagtccaaagtcctagaaatca
attacgtgaagcaggggactgattatgatggattatatcagtgtggtgct
aataaaaataaattggagacagtaaaattaatagtaggtaaattgagaga
ccatagtgatcgattaggattgtggctgggatttgtggaaagaaagaaat
aagtgaaggacaaatcaaagggctttgtttgcgtgtttgctttctgtcta
tgaactgtagctgtgtcatccttgttcatcactgaacgatagggctcatc
acctggaaagttgtgaagaagaacacttggatgaatatatacactccaga
aaaataaactggctgggaatacagtttatgagcaattcaatggagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835441_18835968
seq2: B6Ng01-043P18.b_47_569 (reverse)

seq1  CCCAGAGATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAG  50
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAAATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAG  50

seq1  CTAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGG  100

seq1  CACAACTGGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATC  150
      ||||||||||||||||| |||||||||||| |||||||||||||||||||
seq2  CACAACTGGTTGTTATCATGTAGAAGAATGCGAATCGATCCATACTTATC  150

seq1  TCCATGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAAC  200
      ||| ||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TCCTTGTACTAAGGTCAAATCTAAGTGGATCAAAGAACTTCACATAAAAC  200

seq1  CAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGAT  250

seq1  ATGGGCAGAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGT  299
      ||||||| ||||||||  |||||||||| |||||||||||| ||||||||
seq2  ATGGGCACAGGGGAAATATTCCTGAACAAAACAGCAATGGCATGTGCTGT  300

seq1  GAGGTAGAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCA  349
       || | |||||| |||||||||||||||||||||||||||||||||||||
seq2  AAGATCGAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCA  350

seq1  AGGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAA  399
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AGGCAAAAGACACCGTCAACAAGACAAAAAGACCACCAACAGATTGGGAA  400

seq1  AGGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATA  449
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AGGATCTTTACCTATCCTAAATCAGATAGGGGGCTAATATCCAACATATA  450

seq1  TAAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATA  499
      ||||||||||||      ||||||||||||||| || ||||||||||| |
seq2  TAAAGAACTCAA------GGACTTCAGAAAATCGAACAACCCCATTAAAA  494

seq1  AATGGGGCTCAGAACTGAACAAAGAATTC  528
      |||||||||||||||||||||||||||||
seq2  AATGGGGCTCAGAACTGAACAAAGAATTC  523

seq1: chr7_79743292_79744450
seq2: B6Ng01-043P18.g_69_1214

seq1  GAATTCCTGTCAAGGTTTGATGCAATCAATGTTTTCTTAAAAAAATAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTCAAGGTTTGATGCAATCAATGTTTTCTTAAAAAAATAACA  50

seq1  GTTCACCTATGAACAGGAGACTTTCCTTGAACCTACAGTAAACACAGTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCACCTATGAACAGGAGACTTTCCTTGAACCTACAGTAAACACAGTGA  100

seq1  GAGAATTATCTAGTATAAGAAACAGATTTAACCCAGATGTAAATGCATCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATTATCTAGTATAAGAAACAGATTTAACCCAGATGTAAATGCATCC  150

seq1  CCAGAGAGCCTTACAAGATATTTCAGTGTCCAGTGACTTGCAAGATTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGAGCCTTACAAGATATTTCAGTGTCCAGTGACTTGCAAGATTCTT  200

seq1  GATCCATGTCAATCAATCATCTGAATGCTACAGCAACAGCCATACTTTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCATGTCAATCAATCATCTGAATGCTACAGCAACAGCCATACTTTAT  250

seq1  GGGTGTTCCCCATCAATAGCAACTCAAAATAATGAACTTTCAATACTATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTTCCCCATCAATAGCAACTCAAAATAATGAACTTTCAATACTATT  300

seq1  TCTCTTAGATTACTAGTTTTTAAGTATTTCAGCACTTCTCTCTAATTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTAGATTACTAGTTTTTAAGTATTTCAGCACTTCTCTCTAATTTTT  350

seq1  AATATTCATCCAATTTCTTTTGAACTAAAAAATTCAATTAATTTGTAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTCATCCAATTTCTTTTGAACTAAAAAATTCAATTAATTTGTAGCT  400

seq1  TGACATTTCCACATTTAACTCTGACATTTAGGAGTTCCTTGGGTAAGAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATTTCCACATTTAACTCTGACATTTAGGAGTTCCTTGGGTAAGAAT  450

seq1  ATGTAAATAAGATGATGGCTCCAGGCTTAATCCAGGAAAGAACAAGAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAATAAGATGATGGCTCCAGGCTTAATCCAGGAAAGAACAAGAAAC  500

seq1  TACCTCACTAGAGTGAATGTCATGAGCTGTTCACTTAAGTGTGTTACACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCACTAGAGTGAATGTCATGAGCTGTTCACTTAAGTGTGTTACACT  550

seq1  GCAATGGATTTACAGGGCCCTATGGTTTCCAAAAGCCTTTTATAAAATTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGGATTTACAGGGCCCTATGGTTTCCAAAAGCCTTTTATAAAATTA  600

seq1  ACTAACTAACAAACAAACATTTAAGAACTTTGCATGTGCCAGACACCTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAACTAACAAACAAACATTTAAGAACTTTGCATGTGCCAGACACCTTG  650

seq1  AAAGATGCTGACTCTAGTCCTTCATAATTAGCTTCATCCCATCTCTCCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATGCTGACTCTAGTCCTTCATAATTAGCTTCATCCCATCTCTCCAG  700

seq1  GATCATCTTCCAAGACTCAAACTGGAACATCCCCCAAGCTACTGTAAGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATCTTCCAAGACTCAAACTGGAACATCCCCCAAGCTACTGTAAGGA  750

seq1  TGATGGAAGAAATTCGGAGAATGCAGGGAAGTCCAAAGTCCTAGAAATCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGAAGAAATTCGGAGAATGCAGGGAAGTCCAAAGTCCTAGAAATCA  800

seq1  ATTACGTGAAGCAGGGGACTGATTATGATGGATTATATCAGTGTGGTGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACGTGAAGCAGGGGACTGATTATGATGGATTATATCAGTGTGGTGCT  850

seq1  AATAAAAATAAATTGGAGACAGTAAAATTAATAGTAGGTAAAATTGAGAG  900
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  AATAAAAATAAATTGGAGACAGTAAAATTAATAGTAGGT-AAATTGAGAG  899

seq1  ACCATAGTGATCGATTAGGATTGTGGCTGGGATTTGTGGAAAAGAAAGAA  950
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  ACCATAGTGATCGATTAGGATTGTGGCTGGGATTTGTGG-AAAGAAAGAA  948

seq1  ATAAGTGAAGGACAAATCAAAGGGCTTTGTTTGCGTGTTTGCTTTCCTGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ATAAGTGAAGGACAAATCAAAGGGCTTTGTTTGCGTGTTTGCTTT-CTGT  997

seq1  CTATGAACTGTAGCTGTGTCATTCCTTGTTCATCACTGAAAACGATAGGG  1050
      ||||||||||||||||||||| ||||||||||||||||  ||||||||||
seq2  CTATGAACTGTAGCTGTGTCA-TCCTTGTTCATCACTG--AACGATAGGG  1044

seq1  CTCAATCACCTGGAAAGTTGTGAAGAAGGAACACTTTGATGATATAT-TA  1099
      ||| ||||||||||||||||||||||| |||||||| ||||| |||| ||
seq2  CTC-ATCACCTGGAAAGTTGTGAAGAA-GAACACTTGGATGA-ATATATA  1091

seq1  CACTCCAG-AAGATAAACTGGGTTGGGAATACAAGTTTATGAGCAATTTT  1148
      |||||||| || ||||||| || ||||||||| |||||||||||||||  
seq2  CACTCCAGAAAAATAAACT-GGCTGGGAATAC-AGTTTATGAGCAATT--  1137

seq1  ACAATGAGAGC  1159
       ||||| ||||
seq2  -CAATG-GAGC  1146