BAC Information

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BAC

Clone NameB6Ng01-044B02
Chromosome6 (Build37)
Map Location 118,394,401 - 118,501,242
singlet/doubletdoublet
Overlap geneZfp248, Zfp9, Ankrd26
Upstream geneLOC621462, EG640370, EG621705, LOC100043779, Zfp637, Zfp239, 4933440N22Rik, Hnrpf, Fxyd4, LOC232338, Rasgef1a, Galnact2, Ret, 1700069P05Rik, Bms1
Downstream geneCacna1c, Dcp1b, Cacna2d4, Lrtm2, Adipor2, Wnt5b, Fbxl14
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-044B02.bB6Ng01-044B02.g
ACCDH869932DH869933
length1,108985
definitionDH869932|Mus musculus domesticus DNA, BAC clone: B6Ng01-044B02, 5' end.DH869933|Mus musculus domesticus DNA, BAC clone: B6Ng01-044B02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(118,500,132 - 118,501,242)(118,394,401 - 118,395,292)
sequence
gaattcttaaaaacatgctcaccttgtgatgtttagatgtaaacttgcat
gacactgaggaaataatcatgttaaaaagacaaaaataacaaaaagcaaa
aacagagaagtgtcgtgaaaggagggcgatgcagctcataactgctgtct
gaaactgtggcgttggatcatgatgagactaaaatatctttgccttattg
cattagttaatatatttttgaatctgtatattatccatagaattctaatt
agcaaatcatctccaagtaggaaattaatggagcattgcgtttcccagtg
tcatctttatctagtagtgatgttacatctctcaggtgatggtagctaaa
cgtgactgagcgctatgtacttacagtacagaattaacttttcattacag
taatgtctttaaaatgtaactacaaatcattattagggttgtactgtgag
tcaaggttctcatgttatgctggctggttttattttgacttgatacaagc
taggattgtctgagaggaaggaacctcaattgagaaaatgcctccatatg
atcaggctctagggcattttcttaatcatgggggtggtccagctcattgt
aggtggggccatccctgggttggtagtcctgggtcctataagaaagcagg
ctgagcaagccatggggagcaagccagtaagcagcaccctccatggcctc
tgcatcagctccagcctccaggttcctgccctgcttgggttcctgtcctg
acttggtaaacagtgatgtagaccctttcctcccaagtctctttggtcat
ggtgttacatcgcagtagtagtaaccctaactaggccgggctttcctcct
ttcttcttcatttaaactcattcatacgttcctgcctccgtacgcggaca
tgtgacagctgtctgcggtgtcttctatcggtgcccttttctcatgggtg
gcatgtttagccatgcttctcttcagtccctgcgtgtgctttgccgcaca
agatttattctttttcctcctcttggttagaaagaggctaattgtgtata
atatttgcattgttactttggccacacagggtagaatccacttaacactg
ttggattt
gaattctttggagaaacagaaaaaaagaatctaaattcgtatggaagctt
caaagagccatgacagtcaaagaaatcccgcacaaaggggcactgctgga
gctatcacaagttctgatttccagtcctctccagagccatagtaacaaaa
ccccacggtactgatataatggaacagaacagcagaccaagaatcaaaag
gaaaaaaagcagataaaaaatttctgctttcataaaatgaggggaaaaat
aaaaccacacggcgttctatagtcatgagatttctgacagtgatgccaaa
accacacccttagcaaaagccaacctctttaacaaatgccactcggaaaa
ctgagcattcacaggtagaagtacatcgcttcctacatcttactctacaa
aaactaattcaaaatagaccaaagatcttaataccaagaactaaaacata
gcatttcacagaattagaatcctcatccatagcagaggaaaaaacgagca
aagatagcatacagaatgagaaaaaaatctttactagataatatatgaca
aaggatttatacacagaaaataaaagaactcaaaaacacaaaaccccaaa
caacccaatcaacaaacacatgaaaataaattaattttaaatatgcaact
aaaaagagacctaacactgacccagctataccacttctgagtatatactg
aaagagctatgttgttaggtttttttccaacttgacacaagacagggtca
cttagaaaaagggaatctcagctgagaaaacgagcccagcagactggccc
gattagagcttcatataggagggtgcagtctgctgtgggctgggacacct
tgggcaggtagttctggatgtaacagaaagcaggctgcgcaagccatgga
gatgaagagaatggacagcgttctccacagtcttggctttagttctgcat
gccccctcctgtggggagttgagttcctgccttga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_118500132_118501242
seq2: B6Ng01-044B02.b_44_1151 (reverse)

seq1  AAATCCAAACAGTG-TAAGT-GATTCTACCCTGTGTGCCAAAAGTAAC-A  47
      |||||| ||||||| ||||| |||||||||||||||| | |||||||| |
seq2  AAATCC-AACAGTGTTAAGTGGATTCTACCCTGTGTGGCCAAAGTAACAA  49

seq1  TGCAAATTATTATACACATTTAG-CTCTTTCTAACCAAGAGGAGGGAAAA  96
      |||||| ||||||||||| |||| ||||||||||||||||||| ||||||
seq2  TGCAAA-TATTATACACAATTAGCCTCTTTCTAACCAAGAGGA-GGAAAA  97

seq1  AGAATAAATCTTGTGCGGCAAAGCCACACGCAGGGACTGAAGAGAAGCAT  146
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AGAATAAATCTTGTGCGGCAAAG-CACACGCAGGGACTGAAGAGAAGCAT  146

seq1  GGCTAAACATGCCAACCATGGAGAAAAGGGCACCGATAGAAGACACCGCA  196
      |||||||||||||| |||| ||||||||||||||||||||||||||||||
seq2  GGCTAAACATGCCACCCAT-GAGAAAAGGGCACCGATAGAAGACACCGCA  195

seq1  GACAGCTGTCACATGTCCGCGTACGGAGGCAGGGAACGTATGAATGAGTT  246
      ||||||||||||||||||||||||||||||| |||||||||||||||| |
seq2  GACAGCTGTCACATGTCCGCGTACGGAGGCA-GGAACGTATGAATGAG-T  243

seq1  TTAAATGAAGAAGAAAGGAGGAAAGCCCGGCCTAGTTAGGGTTACTACTA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATGAAGAAGAAAGGAGGAAAGCCCGGCCTAGTTAGGGTTACTACTA  293

seq1  CTGCGATGTAACACCATGACCAAAGAGACTTGGGAGGAAAGGGTCTACAT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCGATGTAACACCATGACCAAAGAGACTTGGGAGGAAAGGGTCTACAT  343

seq1  CACTGTTTACCAAGTCAGGACAGGAACCCAAGCAGGGCAGGAACCTGGAG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTTTACCAAGTCAGGACAGGAACCCAAGCAGGGCAGGAACCTGGAG  393

seq1  GCTGGAGCTGATGCAGAGGCCATGGAGGGTGCTGCTTACTGGCTTGCTCC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAGCTGATGCAGAGGCCATGGAGGGTGCTGCTTACTGGCTTGCTCC  443

seq1  CCATGGCTTGCTCAGCCTGCTTTCTTATAGGACCCAGGACTACCAACCCA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGCTTGCTCAGCCTGCTTTCTTATAGGACCCAGGACTACCAACCCA  493

seq1  GGGATGGCCCCACCTACAATGAGCTGGACCACCCCCATGATTAAGAAAAT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGGCCCCACCTACAATGAGCTGGACCACCCCCATGATTAAGAAAAT  543

seq1  GCCCTAGAGCCTGATCATATGGAGGCATTTTCTCAATTGAGGTTCCTTCC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTAGAGCCTGATCATATGGAGGCATTTTCTCAATTGAGGTTCCTTCC  593

seq1  TCTCAGACAATCCTAGCTTGTATCAAGTCAAAATAAAACCAGCCAGCATA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGACAATCCTAGCTTGTATCAAGTCAAAATAAAACCAGCCAGCATA  643

seq1  ACATGAGAACCTTGACTCACAGTACAACCCTAATAATGATTTGTAGTTAC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGAGAACCTTGACTCACAGTACAACCCTAATAATGATTTGTAGTTAC  693

seq1  ATTTTAAAGACATTACTGTAATGAAAAGTTAATTCTGTACTGTAAGTACA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAAGACATTACTGTAATGAAAAGTTAATTCTGTACTGTAAGTACA  743

seq1  TAGCGCTCAGTCACGTTTAGCTACCATCACCTGAGAGATGTAACATCACT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCGCTCAGTCACGTTTAGCTACCATCACCTGAGAGATGTAACATCACT  793

seq1  ACTAGATAAAGATGACACTGGGAAACGCAATGCTCCATTAATTTCCTACT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGATAAAGATGACACTGGGAAACGCAATGCTCCATTAATTTCCTACT  843

seq1  TGGAGATGATTTGCTAATTAGAATTCTATGGATAATATACAGATTCAAAA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGATGATTTGCTAATTAGAATTCTATGGATAATATACAGATTCAAAA  893

seq1  ATATATTAACTAATGCAATAAGGCAAAGATATTTTAGTCTCATCATGATC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTAACTAATGCAATAAGGCAAAGATATTTTAGTCTCATCATGATC  943

seq1  CAACGCCACAGTTTCAGACAGCAGTTATGAGCTGCATCGCCCTCCTTTCA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACGCCACAGTTTCAGACAGCAGTTATGAGCTGCATCGCCCTCCTTTCA  993

seq1  CGACACTTCTCTGTTTTTGCTTTTTGTTATTTTTGTCTTTTTAACATGAT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACACTTCTCTGTTTTTGCTTTTTGTTATTTTTGTCTTTTTAACATGAT  1043

seq1  TATTTCCTCAGTGTCATGCAAGTTTACATCTAAACATCACAAGGTGAGCA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCCTCAGTGTCATGCAAGTTTACATCTAAACATCACAAGGTGAGCA  1093

seq1  TGTTTTTAAGAATTC  1111
      |||||||||||||||
seq2  TGTTTTTAAGAATTC  1108

seq1: chr6_118394401_118395292
seq2: B6Ng01-044B02.g_161_1051

seq1  GCTGGAGCTATCACAAGTTCTGATTTCCAGTCCTCTCCAGAGCCATAGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAGCTATCACAAGTTCTGATTTCCAGTCCTCTCCAGAGCCATAGTA  50

seq1  ACAAAACCCCACGGTACTGATATAATGGAACAGAACAGCAGACCAAGAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACCCCACGGTACTGATATAATGGAACAGAACAGCAGACCAAGAAT  100

seq1  CAAAAGGAAAAAAAGCAGATAAAAAATTTCTGCTTTCATAAAATGAGGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGGAAAAAAAGCAGATAAAAAATTTCTGCTTTCATAAAATGAGGGG  150

seq1  AAAAATAAAACCACACGGCGTTCTATAGTCATGAGATTTCTGACAGTGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAAAACCACACGGCGTTCTATAGTCATGAGATTTCTGACAGTGAT  200

seq1  GCCAAAACCACACCCTTAGCAAAAGCCAACCTCTTTAACAAATGCCACTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAAACCACACCCTTAGCAAAAGCCAACCTCTTTAACAAATGCCACTC  250

seq1  GGAAAACTGAGCATTCACAGGTAGAAGTACATCGCTTCCTACATCTTACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAACTGAGCATTCACAGGTAGAAGTACATCGCTTCCTACATCTTACT  300

seq1  CTACAAAAACTAATTCAAAATAGACCAAAGATCTTAATACCAAGAACTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAAAAACTAATTCAAAATAGACCAAAGATCTTAATACCAAGAACTAA  350

seq1  AACATAGCATTTCACAGAATTAGAATCCTCATCCATAGCAGAGGAAAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAGCATTTCACAGAATTAGAATCCTCATCCATAGCAGAGGAAAAAA  400

seq1  CGAGCAAAGATAGCATACAGAATGAGAAAAAAATCTTTACTAGATAATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGCAAAGATAGCATACAGAATGAGAAAAAAATCTTTACTAGATAATAT  450

seq1  ATGACAAAGGATTTATACACAGAAAATAAAAGAACTCAAAAACACAAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACAAAGGATTTATACACAGAAAATAAAAGAACTCAAAAACACAAAAC  500

seq1  CCCAAACAACCCAATCAACAAACACATGAAAATAAATTAATTTTAAATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAACAACCCAATCAACAAACACATGAAAATAAATTAATTTTAAATAT  550

seq1  GCAACTAAAAAGAGACCTAACACTGACCCAGCTATACCACTTCTGAGTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTAAAAAGAGACCTAACACTGACCCAGCTATACCACTTCTGAGTAT  600

seq1  ATACTGAAAGAGCTATGTTGTTAGGTTTTTTTCCAACTTGACACAAGACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGAAAGAGCTATGTTGTTAGGTTTTTTTCCAACTTGACACAAGACA  650

seq1  GGGTCACTTAGAAAAAGGGAATCTCAGCTGAGAAAACGAGCCCAGCAGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCACTTAGAAAAAGGGAATCTCAGCTGAGAAAACGAGCCCAGCAGAC  700

seq1  TGGCCCGATTAGAGCTTCATATAGGAGGGTGCAGTCTGCTGTGGGCTGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCCGATTAGAGCTTCATATAGGAGGGTGCAGTCTGCTGTGGGCTGGG  750

seq1  ACACCCTTGGGCAGGTAGTTCTGGATGTAACAGAAAGCAGGCTGCGCAAG  800
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACA-CCTTGGGCAGGTAGTTCTGGATGTAACAGAAAGCAGGCTGCGCAAG  799

seq1  CCATGGAGATGAAGAGAGTGGACAGCGTTCTCCACAGTCTCGGCTTTAGT  850
      ||||||||||||||||| |||||||||||||||||||||| |||||||||
seq2  CCATGGAGATGAAGAGAATGGACAGCGTTCTCCACAGTCTTGGCTTTAGT  849

seq1  TCTGCATGCACGCTCCTGTGGGAGTTTGAGTTCCTGCCTTGA  892
      ||||||||| | ||||||||||   |||||||||||||||||
seq2  TCTGCATGCCCCCTCCTGTGGGGAGTTGAGTTCCTGCCTTGA  891