BAC Information

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BAC

Clone NameB6Ng01-047L23
Chromosome6 (Build37)
Map Location 141,366,839 - 141,367,868
singlet/doubletsinglet
Overlap genePde3a
Upstream geneLOC269810, Plekha5, Aebp2, EG664868, LOC664875
Downstream geneSlco1c1, Slco1b2, EG435927, Slco1a4, LOC100042750, EG664913, Slco1a1, EG625716, Slco1a6, Slco1a5, Iapp, BC027061, Recql, Golt1b, B230216G23Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-047L23.bB6Ng01-047L23.g
ACCDH872521DH872522
length1,0141,149
definitionDH872521|Mus musculus domesticus DNA, BAC clone: B6Ng01-047L23, 5' end.DH872522|Mus musculus domesticus DNA, BAC clone: B6Ng01-047L23, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacactttcaaagagtcaccctgccagagtccacagaaactggga
tactagatggctgtgatgcagaaaagaatggttgtagaagaaacattaaa
ctttctagttccacaagatgtgaaagtgacccaaaatggtaggattagcc
tttaaaagacttggttttctcattcacaagaggaaattacatccatgttg
tatactttttcttgatatatagcactaggaggtcttaaataagtaatgtg
tgcaaaaaaacccaacagattatttttcttttaagacaagggtctcagtg
tctcattctatagcctaggttaaccttaaacttcctgtgtatcctgggct
agtcctgaaatctcggtgatccatttgagtgctagtattaagtaccacat
ctggctcaatactctcaggatgatttcagtagcaagatttttcctatctt
gattctacaaccgccatgctatctgaatccaccatcagcattttttcacg
acatggggttcccagggcttacatttcatgtaatccaccagaacaagtgt
ctatttttctgctgggaaattggaatcaacttgctaggccttctatttaa
agttatgtcagtgttggggatagggagtgattagacaggcttgctgttct
tgcagaagatctgggttcaaccccagcactcaagtcaggtggctgacaac
tgcctgtaactctgggggatctggcacatagagacagactcaaaaacatg
tacatgtatatacacataaataaaaacaagtcttaaacatgaatacaagt
acatcagcttgtagcattttctgttgggccttgtctgctcaaattggtaa
atgctggtaccattctcatcaaagaaattcctctctgtcaggttcccttc
cactgagtatcatctggtatcctgccctgtccagtgctgacttctgtgat
agataggaggtacatctgactacaatttgaatcttcttctacttctgtag
atgtcatagcacgt
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatgtctaagataaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatctgtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagcattatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaata
gagtactactcagctatcaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccataacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagatttatcgaagg
acccagatgtagctgtctcttgtgagactatgccggggcctagcaaatac
agaagtgatctcacagtcagctaatgatgatcacagggctcctatgagag
ctagagaagtactcaagagctaaaggatctgcatctatagtgatcacata
tgactaccagtactcggagctcttgactctagctgctatgtatcaagatg
ctagtcgctatcttgaaagagaggcttatgacacgcaactttattgccga
ccagggaacgctcaggccaaaaggggaaatgtgctggtatggtgatgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_141366839_141367868
seq2: B6Ng01-047L23.b_48_1061

seq1  GAATTCACACTTTCAAAGAGTCACCCTGCCAGAGTCCACAGAAACTGGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACACTTTCAAAGAGTCACCCTGCCAGAGTCCACAGAAACTGGGA  50

seq1  TACTAGATGGCTGTGATGCAGAAAAGAATGGTTGTAGAAGAAACATTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAGATGGCTGTGATGCAGAAAAGAATGGTTGTAGAAGAAACATTAAA  100

seq1  CTTTCTAGTTCCACAAGATGTGAAAGTGACCCAAAATGGTAGGATTAGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTAGTTCCACAAGATGTGAAAGTGACCCAAAATGGTAGGATTAGCC  150

seq1  TTTAAAAGACTTGGTTTTCTCATTCACAAGAGGAAATTACATCCATGTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAGACTTGGTTTTCTCATTCACAAGAGGAAATTACATCCATGTTG  200

seq1  TATACTTTTTCTTGATATATAGCACTAGGAGGTCTTAAATAAGTAATGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTTTTTCTTGATATATAGCACTAGGAGGTCTTAAATAAGTAATGTG  250

seq1  TGCAAAAAAACCCAACAGATTATTTTTCTTTTAAGACAAGGGTCTCAGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAAAAAACCCAACAGATTATTTTTCTTTTAAGACAAGGGTCTCAGTG  300

seq1  TCTCATTCTATAGCCTAGGTTAACCTTAAACTTCCTGTGTATCCTGGGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATTCTATAGCCTAGGTTAACCTTAAACTTCCTGTGTATCCTGGGCT  350

seq1  AGTCCTGAAATCTCGGTGATCCATTTGAGTGCTAGTATTAAGTACCACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTGAAATCTCGGTGATCCATTTGAGTGCTAGTATTAAGTACCACAT  400

seq1  CTGGCTCAATACTCTCAGGATGATTTCAGTAGCAAGATTTTTCCTATCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTCAATACTCTCAGGATGATTTCAGTAGCAAGATTTTTCCTATCTT  450

seq1  GATTCTACAACCGCCATGCTATCTGAATCCACCATCAGCATTTTTTCACG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTACAACCGCCATGCTATCTGAATCCACCATCAGCATTTTTTCACG  500

seq1  ACATGGGGTTCCCAGGGCTTACATTTCATGTAATCCACCAGAACAAGTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGGGTTCCCAGGGCTTACATTTCATGTAATCCACCAGAACAAGTGT  550

seq1  CTATTTTTCTGCTGGGAAATTGGAATCAACTTGCTAGGCCTTCTATTTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTTTCTGCTGGGAAATTGGAATCAACTTGCTAGGCCTTCTATTTAA  600

seq1  AGTTATGTCAGTGTTGGGGATAGGGAGTGATTAGACAGGCTTGCTGTTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATGTCAGTGTTGGGGATAGGGAGTGATTAGACAGGCTTGCTGTTCT  650

seq1  TGCAGAAGATCTGGGTTCAACCCCAGCACTCAAGTCAGGTGGCTGACAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAAGATCTGGGTTCAACCCCAGCACTCAAGTCAGGTGGCTGACAAC  700

seq1  TGCCTGTAACTCTGGGGGATCTGGCACATAGAGACAGACTCAAAAACATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGTAACTCTGGGGGATCTGGCACATAGAGACAGACTCAAAAACATG  750

seq1  TACATGTATATACACATAAATAAAAACAAGTCTTAAACATGAATACAAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGTATATACACATAAATAAAAACAAGTCTTAAACATGAATACAAGT  800

seq1  ACATCAGCTTGTAGCATTTTCTGTTGGGCCTTGTCTGCTCAAATTGGTAA  850
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  ACATCAGCTTGTAGCATTTTCTGTTGGGCCTTGTCTGCTCAAATTGGT-A  849

seq1  AATGCTGGTACCATTCTCATCAAAAGAAATTCCTCTCTGTCAGGTTCCCT  900
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AATGCTGGTACCATTCTCATC-AAAGAAATTCCTCTCTGTCAGGTTCCCT  898

seq1  TCCACTGAGTTATCATCTGGTATCCTGCCCTGTCCCAGTGCTGACTTCTG  950
      ||||||||| ||||||||||||||||||||||| ||||||||||||||||
seq2  TCCACTGAG-TATCATCTGGTATCCTGCCCTGT-CCAGTGCTGACTTCTG  946

seq1  TGATAGATAGGAGGGGTACATCCTGACCTACCAATTTGAAAATCTTCCTT  1000
      ||||||||||||  ||||||| |||| ||| |||||||  |||||| |||
seq2  TGATAGATAGGA--GGTACAT-CTGA-CTA-CAATTTG--AATCTT-CTT  988

seq1  CTAACTTTCTGTAGATGTCATTTAGCACGT  1030
      |||   ||||||||||||||  ||||||||
seq2  CTA--CTTCTGTAGATGTCA--TAGCACGT  1014