BAC Information

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BAC

Clone NameB6Ng01-048K15
Chromosome6 (Build37)
Map Location 146,173,248 - 146,338,943
singlet/doubletdoublet
Overlap geneItpr2
Upstream geneKras, LOC100039495, LOC100042866, LOC546917, 1700073E17Rik, Ifltd1, LOC100042879, Tuba3b, Rassf8, Bhlhb3, Sspn
Downstream gene4933424B01Rik, Fgfr1op2, Tm7sf3, Surb7, EG626175, Stk38l, LOC621842, Arntl2, 1700023A16Rik, Ppfibp1, 1700034J05Rik, 2210417D09Rik, Mrps35, EG545893, Klhdc5, EG665288, LOC100039641, Pthlh
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-048K15.bB6Ng01-048K15.g
ACCDH873158DH873159
length1,0931,020
definitionDH873158|Mus musculus domesticus DNA, BAC clone: B6Ng01-048K15, 5' end.DH873159|Mus musculus domesticus DNA, BAC clone: B6Ng01-048K15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(146,173,248 - 146,174,348)(146,337,909 - 146,338,943)
sequence
gaattctctctgcattctcactgtcatgtctgctctccataatggccagc
agaagcttggaggcgttgttctgaggacaaagacggggtcagtgcacata
caaagtccacagcacaggtcaaaaatcccctgcattggtgggaactcaga
tcacacagcccttttcatattctcaatcagatgaaagctgaaacttattt
ttattttgtcatactaacatttgaaaatagaaggttttaatttacttcat
tgttgatacaaagtaaaagtcatgaaagatgggaggatattttaaatcac
aggtgtttttaatgggaaagtggctacacaccacactgaatagaactatg
gcttcttttagtgcttcctccgttagatttctataatgatactttaataa
gacaatcagatgaacaggcatcaatgacattttatagacacggctagaac
ttagagaatttagcacaaccatttaaaaaatgaagtagtaatattagtag
catactgaaattgcacataaacgtgtgagtcactgttgagaatagatata
tgaaattaaattcatgagttagagagagaatgatttgctgatagtgtgct
tatttcacggcatttattattcagtatgtcagagaataacattttgctct
attctcttaataaaggatggaagcggtttatgctgccgatgtgttgcatt
gtattaattataaacattatctcaagtattgttacttaagatatcgaggt
gtgaagcaatcttcagtcctgagtgggcaccagagctgcactggaagcat
tctgtcctctgtcagtaaaaccttacactctacagattcctgataagact
aagaaatggaaagagggagaagccgtttagagatgtttctaagagactca
gagttcacatgcttttagaacgacataagttaagctgatcactgtttggt
gggggtggacaaagcactaaattgaccaagttgtataagttatcttctgg
ttacatttggttccacattctggtccaagctctcagacttgctgatacac
cttaaagaatgtcctatggactgaaataatgaggtgacaggcc
gaattcttgccagcagagacacctgatggctcacaacaacctgtaattct
aggtctgtgggacctggcgccctcctctggccgtcacatgcacatacata
cacatatacagaaacacacacataaataaaaattaaaaacaaaacaaaac
aaaaactggaacctaaaactgtctgatggtatacttactttttccatttt
atcttggcttgaaaataaacggtttaaatttctctctgttcttattttga
aagcttttagggatcacatgacatacttgaatatgtttggattttgagtt
ttgtgttgtcatttttacatattacatattttcatatgctctctgcctga
gccactcacccagagaaactgggttcttgattcctaacttacttattttt
aaaggtgtgagaaaaagaataatggctgctagaaatctgaaaaccaaacc
caagccttcatgtagtgaagcttcaatagcgattcccattttggccaaat
gaaatggagattaaactctatctgggtaaaatcacataaatagtgagtgg
ggggtccagtcacatgattgacagttggagtttcccatggcctcacggta
tagactcctccctcttcttctctttgtgatatgctgcagactttgaatct
gaacagttaaggaggtatttgctgagtctctggcatgcacaccagagctc
ccacctacagccactgagatgattggctccttgctaaacagcccagccag
ggatggtaaagtcagagaaacagatgcttggctcactggttcacccctca
gttggacattcttgaacatttgtccaaaataagcccagaacacaagggca
aaatgtccagccttgttctaaacaaaccaaactgacgctatccatgttta
tcatagttgagataaacagtactatgctcatagagtgagtacacacagca
gaaacacgatgactatatgtatgtgtgatggcatgggtgacctaacaagc
cctggtgggttgggagaaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_146173248_146174348
seq2: B6Ng01-048K15.b_48_1140

seq1  GAATTCTCTCTGCATTCTCACTGTCATGTCTGCTCTCCATAATGGCCAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCTGCATTCTCACTGTCATGTCTGCTCTCCATAATGGCCAGC  50

seq1  AGAAGCTTGGAGGCGTTGTTCTGAGGACAAAGACGGGGTCAGTGCACATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCTTGGAGGCGTTGTTCTGAGGACAAAGACGGGGTCAGTGCACATA  100

seq1  CAAAGTCCACAGCACAGGTCAAAAATCCCCTGCATTGGTGGGAACTCAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTCCACAGCACAGGTCAAAAATCCCCTGCATTGGTGGGAACTCAGA  150

seq1  TCACACAGCCCTTTTCATATTCTCAATCAGATGAAAGCTGAAACTTATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACAGCCCTTTTCATATTCTCAATCAGATGAAAGCTGAAACTTATTT  200

seq1  TTATTTTGTCATACTAACATTTGAAAATAGAAGGTTTTAATTTACTTCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTGTCATACTAACATTTGAAAATAGAAGGTTTTAATTTACTTCAT  250

seq1  TGTTGATACAAAGTAAAAGTCATGAAAGATGGGAGGATATTTTAAATCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGATACAAAGTAAAAGTCATGAAAGATGGGAGGATATTTTAAATCAC  300

seq1  AGGTGTTTTTAATGGGAAAGTGGCTACACACCACACTGAATAGAACTATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTTTTTAATGGGAAAGTGGCTACACACCACACTGAATAGAACTATG  350

seq1  GCTTCTTTTAGTGCTTCCTCCGTTAGATTTCTATAATGATACTTTAATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTTTTAGTGCTTCCTCCGTTAGATTTCTATAATGATACTTTAATAA  400

seq1  GACAATCAGATGAACAGGCATCAATGACATTTTATAGACACGGCTAGAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATCAGATGAACAGGCATCAATGACATTTTATAGACACGGCTAGAAC  450

seq1  TTAGAGAATTTAGCACAACCATTTAAAAAATGAAGTAGTAATATTAGTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGAATTTAGCACAACCATTTAAAAAATGAAGTAGTAATATTAGTAG  500

seq1  CATACTGAAATTGCACATAAACGTGTGAGTCACTGTTGAGAATAGATATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACTGAAATTGCACATAAACGTGTGAGTCACTGTTGAGAATAGATATA  550

seq1  TGAAATTAAATTCATGAGTTAGAGAGAGAATGATTTGCTGATAGTGTGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATTAAATTCATGAGTTAGAGAGAGAATGATTTGCTGATAGTGTGCT  600

seq1  TATTTCACGGCATTTATTATTCAGTATGTCAGAGAATAACATTTTGCTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCACGGCATTTATTATTCAGTATGTCAGAGAATAACATTTTGCTCT  650

seq1  ATTCTCTTAATAAAGGATGGAAGCGGTTTATGCTGCCGATGTGTTGCATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCTTAATAAAGGATGGAAGCGGTTTATGCTGCCGATGTGTTGCATT  700

seq1  GTATTAATTATAAACATTATCTCAAGTATTGTTACTTAAGATATCGAGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTAATTATAAACATTATCTCAAGTATTGTTACTTAAGATATCGAGGT  750

seq1  GTGAAGCAATCTTCAGTCCTGAGTGGGCACCAGAGCTGCACTGGAAGCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGCAATCTTCAGTCCTGAGTGGGCACCAGAGCTGCACTGGAAGCAT  800

seq1  TCTGTCCTCTGTCAGGTAAAACCTTACACTCTACAGATTCCTGATAAGAC  850
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TCTGTCCTCTGTCA-GTAAAACCTTACACTCTACAGATTCCTGATAAGAC  849

seq1  TAAGAAATGGAAAGAGGGAGAAGCCGTTTAGAGATGTTTCTAAGAGACTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAATGGAAAGAGGGAGAAGCCGTTTAGAGATGTTTCTAAGAGACTC  899

seq1  AGAGTTCACATGCTTTTAGAACGACATAAGTTAAGCTGAATCACTGTTTG  950
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AGAGTTCACATGCTTTTAGAACGACATAAGTTAAGCTG-ATCACTGTTTG  948

seq1  GTGGGGGTGGACAAAGCACTAAATTGACAAGGTTGTATAAGTTATC-TCT  999
      |||||||||||||||||||||||||||| | ||||||||||||||| |||
seq2  GTGGGGGTGGACAAAGCACTAAATTGACCAAGTTGTATAAGTTATCTTCT  998

seq1  GGTTACATTTGGTTCCACATTCT-GTCCAAGGCTCCCAGGACTGCCTGAT  1048
      ||||||||||||||||||||||| |||||| |||| || ||||  |||||
seq2  GGTTACATTTGGTTCCACATTCTGGTCCAA-GCTCTCA-GACTTGCTGAT  1046

seq1  ACCACCTTTAAAAGGATGTCTAATGAATCTGAAGATAATGAAGGTGACAG  1098
      | ||||||  |||| |||||  ||| | ||||| |||||| |||||||||
seq2  A-CACCTT--AAAGAATGTCCTATGGA-CTGAA-ATAATG-AGGTGACAG  1090

seq1  GCC  1101
      |||
seq2  GCC  1093

seq1: chr6_146337909_146338943
seq2: B6Ng01-048K15.g_69_1088 (reverse)

seq1  GTTTCCTCCCCACCCAACCCAGTGCTTGTTAGGTTCACCCATGCCATCAC  50
      |||| ||||| |||||  |||| |||||||||| ||||||||||||||||
seq2  GTTT-CTCCCAACCCA--CCAGGGCTTGTTAGG-TCACCCATGCCATCAC  46

seq1  ACATACATATAGTTCATTCGTGTTTCTGGCTGTGTGGTACTCCACTCTAT  100
      |||||||||||| ||| |||||||||| ||||||| ||||| ||||||||
seq2  ACATACATATAG-TCA-TCGTGTTTCT-GCTGTGT-GTACT-CACTCTAT  91

seq1  GAGCATAGTACTGTTTTATTCTTCAACTATGATAAACATGGATAGCCTTC  150
      ||||||||||||| |||||   ||||||||||||||||||||||| | ||
seq2  GAGCATAGTACTG-TTTAT--CTCAACTATGATAAACATGGATAG-CGTC  137

seq1  AGTTTGGGTTTGTTTAGAACAAGGCTGGACATTTTTGCCCTTGTGTTCTG  200
      ||||| ||||||||||||||||||||||||| ||||||||||||||||||
seq2  AGTTT-GGTTTGTTTAGAACAAGGCTGGACA-TTTTGCCCTTGTGTTCTG  185

seq1  GGCTTATTTTGGACAAATGTTCAAGAATGTCCAACTGAGGGGTGAACCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTATTTTGGACAAATGTTCAAGAATGTCCAACTGAGGGGTGAACCAG  235

seq1  TGAGCCAAGCATCTGTTTCTCTGACTTTACCATCCCTGGCTGGGCTGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCAAGCATCTGTTTCTCTGACTTTACCATCCCTGGCTGGGCTGTTT  285

seq1  AGCAAGGAGCCAATCATCTCAGTGGCTGTAGGTGGGAGCTCTGGTGTGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGGAGCCAATCATCTCAGTGGCTGTAGGTGGGAGCTCTGGTGTGCA  335

seq1  TGCCAGAGACTCAGCAAATACCTCCTTAACTGTTCAGATTCAAAGTCTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGAGACTCAGCAAATACCTCCTTAACTGTTCAGATTCAAAGTCTGC  385

seq1  AGCATATCACAAAGAGAAGAAGAGGGAGGAGTCTATACCGTGAGGCCATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATATCACAAAGAGAAGAAGAGGGAGGAGTCTATACCGTGAGGCCATG  435

seq1  GGAAACTCCAACTGTCAATCATGTGACTGGACCCCCCACTCACTATTTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACTCCAACTGTCAATCATGTGACTGGACCCCCCACTCACTATTTAT  485

seq1  GTGATTTTACCCAGATAGAGTTTAATCTCCATTTCATTTGGCCAAAATGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTTTACCCAGATAGAGTTTAATCTCCATTTCATTTGGCCAAAATGG  535

seq1  GAATCGCTATTGAAGCTTCACTACATGAAGGCTTGGGTTTGGTTTTCAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCGCTATTGAAGCTTCACTACATGAAGGCTTGGGTTTGGTTTTCAGA  585

seq1  TTTCTAGCAGCCATTATTCTTTTTCTCACACCTTTAAAAATAAGTAAGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAGCAGCCATTATTCTTTTTCTCACACCTTTAAAAATAAGTAAGTT  635

seq1  AGGAATCAAGAACCCAGTTTCTCTGGGTGAGTGGCTCAGGCAGAGAGCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATCAAGAACCCAGTTTCTCTGGGTGAGTGGCTCAGGCAGAGAGCAT  685

seq1  ATGAAAATATGTAATATGTAAAAATGACAACACAAAACTCAAAATCCAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAATATGTAATATGTAAAAATGACAACACAAAACTCAAAATCCAAA  735

seq1  CATATTCAAGTATGTCATGTGATCCCTAAAAGCTTTCAAAATAAGAACAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTCAAGTATGTCATGTGATCCCTAAAAGCTTTCAAAATAAGAACAG  785

seq1  AGAGAAATTTAAACCGTTTATTTTCAAGCCAAGATAAAATGGAAAAAGTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAATTTAAACCGTTTATTTTCAAGCCAAGATAAAATGGAAAAAGTA  835

seq1  AGTATACCATCAGACAGTTTTAGGTTCCAGTTTTTGTTTTGTTTTGTTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATACCATCAGACAGTTTTAGGTTCCAGTTTTTGTTTTGTTTTGTTTT  885

seq1  TAATTTTTATTTATGTGTGTGTTTCTGTATATGTGTATGTATGTGCATGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTTATTTATGTGTGTGTTTCTGTATATGTGTATGTATGTGCATGT  935

seq1  GACGGCCAGAGGAGGGCGCCAGGTCCCACAGACCTAGAATTACAGGTTGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGGCCAGAGGAGGGCGCCAGGTCCCACAGACCTAGAATTACAGGTTGT  985

seq1  TGTGAGCCATCAGGTGTCTCTGCTGGCAAGAATTC  1035
      |||||||||||||||||||||||||||||||||||
seq2  TGTGAGCCATCAGGTGTCTCTGCTGGCAAGAATTC  1020