BAC Information

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BAC

Clone NameB6Ng01-049G04
Chromosome6 (Build37)
Map Location 102,867,183 - 102,868,080
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666084, Cntn3, EG666123
Downstream geneChl1, LOC666141
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-049G04.bB6Ng01-049G04.g
ACCDH873664DH873665
length888778
definitionDH873664|Mus musculus domesticus DNA, BAC clone: B6Ng01-049G04, 5' end.DH873665|Mus musculus domesticus DNA, BAC clone: B6Ng01-049G04, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactctggattaaagggaagcattgtactaaccattctcagactg
ggaatacaggcaaaaggattttgtaatcttaaattcttacaaggcagtgg
tggcacacctttaatcccagcacttgggaagcagaggcaggcagattgcc
ggtctacagagtgagttccaggacagccagggctacacagagaacccctg
tctcaaaaataaaaaccaaaaacaacccagaaaattctttactaaaaatg
ttttataagctcttgtacatgcagctttttaaaaacactaatcatttaat
ttaattgtttgttctttgagaattttatgtaatctcttttaataatattt
atccgttcagctttaagtttttcttttcctgttccactctcttcccactc
agctttgtatagccctactcaccaaggtaagttgtgctgctcaaatattc
ttggaagtattttcatctactggagcatggttgagcaataagttactaca
ctgttacaggaaactgacccttactctctgggcagctaacacttcactag
ttcttcactagactctcatgttccacaccccgttacaggggatggatatt
ttgcaacctgttattcactgcaccttggtcaggttttgtgaaattttaat
atgatgtagatttctggtagtctacagaatccttttattgttaaaatttg
tttaaaaatcaggagtaagccaggaagtagtggcacatgcctttaatcca
tcacttggaagcaaaggtaggtggattctgaatccaagtcagcctggtct
cagagtgagtccaggaaaacagtcagccagagttttcagagaaaccctgt
cttgaaaaccaaaccaaaaaaaaaaaaaaaaaatcagg

gaattctgtgctaagggtagaagagttctgatttaaaatttttcatactg
tagctttttttcatatttctgttggctgacgtgttctcactctttgttta
cattctcacaacagatagttataatagaatccttaacattgttttcagag
agttagaacatcagggtcacttgtaggttaggattcattggttgtttttt
ttttccttaaaacattagagatttctgtgtcatgtgtttttgttcttgca
aatcttttgtttcatagactctagtttcttttaatctccttggaaacatt
gatgtttttattttataaagcactcagttttgttatgtgtgaactataag
atgtgtcttttgatgatgaatgtttaaatctcaggtgagtccctttagcc
tttgctggctctaaatattttctttttttttttttttgtggttttttttg
tttgtttgtttttttctttccattttttattaggtatttagctcatttac
atttccaaatctataccaaaagtcccccttacccacccacccccactccc
ctacccgcccacttccccctttttggcactggcgttcccctgttctgggg
catataaagttgtgtgtccaatggggcctctctttccagtgatggccgac
taggccatctttgatacatattctgctagagtcagagctcggggtactgg
ttagttcataatgttgatccacctattggttgcagatcccttagctccct
tgggtactttcttaggtcctcattggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_102867183_102868080
seq2: B6Ng01-049G04.b_47_934 (reverse)

seq1  CCTGATTTTTTTTTTTTTTTTTTTGGTTTGGTTTTTCAAGACAGGGTTTC  50
      ||||| ||||||||||||||||||||||||| ||||||||||||||||||
seq2  CCTGA-TTTTTTTTTTTTTTTTTTGGTTTGG-TTTTCAAGACAGGGTTTC  48

seq1  TCTGTATAGCTCTGGCTGTACTGTTATCCTGGAACTCACTCTGTAGACCA  100
      |||| | | ||||||||| |||||| |||||| |||||||||| ||||||
seq2  TCTG-AAAACTCTGGCTG-ACTGTTTTCCTGG-ACTCACTCTG-AGACCA  94

seq1  GGCTGACCTCGAATTCAGAAATCCACCTACCTCTGCCTCCCAAGTGATGG  150
      |||||| || | |||||| ||||||||||||| || || ||||||||| |
seq2  GGCTGA-CTTGGATTCAG-AATCCACCTACCTTTG-CTTCCAAGTGAT-G  140

seq1  GATTAAAGGCATGTGCCACTACTCCCTGGCTTACTCCCTGATTCTTAAAC  200
      ||||||||||||||||||||||| ||||||||||| ||||||| ||||||
seq2  GATTAAAGGCATGTGCCACTACTTCCTGGCTTACT-CCTGATTTTTAAAC  189

seq1  AAATTTTAACAATAAAAGGATTCTGTAGACTACCAGAAATCTACATCATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTAACAATAAAAGGATTCTGTAGACTACCAGAAATCTACATCATA  239

seq1  TTAAAATTTCACAAAACCTGACCAAGGTGCAGTGAATAACAGGTTGCAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATTTCACAAAACCTGACCAAGGTGCAGTGAATAACAGGTTGCAAA  289

seq1  ATATCCAT-CCCTGTAACGGGGTGTGGAACATGAGAGTCTAGTGAAGAAC  349
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCATCCCCTGTAACGGGGTGTGGAACATGAGAGTCTAGTGAAGAAC  339

seq1  TAGTGAAGTGTTAGCTGCCCAGAGAGTAAGGGTCAGTTTCCTGTAACAGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGAAGTGTTAGCTGCCCAGAGAGTAAGGGTCAGTTTCCTGTAACAGT  389

seq1  GTAGTAACTTATTGCTCAACCATGCTCCAGTAGATGAAAATACTTCCAAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTAACTTATTGCTCAACCATGCTCCAGTAGATGAAAATACTTCCAAG  439

seq1  AATATTTGAGCAGCACAACTTACCTTGGTGAGTAGGGCTATACAAAGCTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTGAGCAGCACAACTTACCTTGGTGAGTAGGGCTATACAAAGCTG  489

seq1  AGTGGGAAGAGAGTGGAACAGGAAAAGAAAAACTTAAAGCTGAACGGATA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGAAGAGAGTGGAACAGGAAAAGAAAAACTTAAAGCTGAACGGATA  539

seq1  AATATTATTAAAAGAGATTACATAAAATTCTCAAAGAACAAACAATTAAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTATTAAAAGAGATTACATAAAATTCTCAAAGAACAAACAATTAAA  589

seq1  TTAAATGATTAGTGTTTTTAAAAAGCTGCATGTACAAGAGCTTATAAAAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATGATTAGTGTTTTTAAAAAGCTGCATGTACAAGAGCTTATAAAAC  639

seq1  ATTTTTAGTAAAGAATTTTCTGGGTTGTTTTTGGTTTTTATTTTTGAGAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTAGTAAAGAATTTTCTGGGTTGTTTTTGGTTTTTATTTTTGAGAC  689

seq1  AGGGGTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCACTCTGTAGACCG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCACTCTGTAGACCG  739

seq1  GCAATCTGCCTGCCTCTGCTTCCCAAGTGCTGGGATTAAAGGTGTGCCAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATCTGCCTGCCTCTGCTTCCCAAGTGCTGGGATTAAAGGTGTGCCAC  789

seq1  CACTGCCTTGTAAGAATTTAAGATTACAAAATCCTTTTGCCTGTATTCCC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCCTTGTAAGAATTTAAGATTACAAAATCCTTTTGCCTGTATTCCC  839

seq1  AGTCTGAGAATGGTTAGTACAATGCTTCCCTTTAATCCAGAGTGAATTC  898
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGAGAATGGTTAGTACAATGCTTCCCTTTAATCCAGAGTGAATTC  888


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