BAC Information

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BAC

Clone NameB6Ng01-050O12
Chromosome6 (Build37)
Map Location 62,142,026 - 62,268,339
singlet/doubletdoublet
Overlap geneC130092O11Rik
Upstream geneLOC100041764, LOC100042694
Downstream geneGA_x5J8B7W6GG0-4757855-4757501, LOC667099, Grid2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-050O12.bB6Ng01-050O12.g
ACCDH874713DH874714
length8011,106
definitionDH874713|Mus musculus domesticus DNA, BAC clone: B6Ng01-050O12, 5' end.DH874714|Mus musculus domesticus DNA, BAC clone: B6Ng01-050O12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,267,539 - 62,268,339)(62,142,026 - 62,143,156)
sequence
gaattcattaaaaagcatcttattttaattatatggaaaattaagaagat
gcactcttcagccattctaagtttgaaagtaaggctcaacattatttagt
aaggatcgtctgtgtagttcatcctcatttgtcatacccacaaatgccac
tcacagggaaagaattcatcccattagaagagacaaaacaatttcaaatt
tacttaagactattatgtttcctaaatgattgaatagttctgtgctaatt
aatatgtccaatgtggaaactctttagaccaatcttttaaaaactaatca
gtgtctatctgaatacacgtgttcacgttaacataacagtactatgaact
aatgcttcctgtcatacctacactcaaaaagctaattaagaaatgtaaaa
aaaacatggaacatcatctttttcttacataaaaagaggtaaaaattcac
caaactttctatttattgttcaataagaaaggcaagtattaaaatcaaaa
caaaacaaatgaaacctgttttttttttacaaaaattctttataaactca
tattatatcagtatttaaagtaaaatgattcatttgtttctatgattata
tgatgataaattaccataccttatatgatagctcacatcaacagttaaag
gaaattctctaaatttcccctggattatatcaattgcttccaaaatcaat
acagaaaacaaatgttagaaaaacaaccttagatgttaaaagtttcctac
tatttcgtaagtgttgctgttgctgttgctgttggtggtggtggtggtgg
t
gaattcacttgttttttttcttccctggacactcaagtgttatatttgaa
ttcaagtgttatatttaaattgttcaaatttgttgattttcgttgtttct
tcctggggcctgtctttactaagagcttgttaggagtctcatgcttgagg
cacagaagtatggagactctttagattgggtctcccatgctttcacatgt
agtatctctagtgacggttcctcccctgcagtttctacaaagggttctta
ctgtcttaggcctgtttctgctgtaggtaaatagaactttctgcatcgat
ttctctatcgctgacttttatggcaaacgaagtaatataaccttagccct
ctgacctgagttcattttgttctcttgtaatgatatgagtgatgacttcc
aaggtatatatacagtgaatattgaaaaactggacatcaggaatcaaata
tttgaaatacgcatatatgagagcatttgcattgactttgtctctcatgt
gaaccttcatgtgtgcattggatgagtcagcttttctgtagtagatgtga
tttgaaaactaaatctgtattggatatatgaagtttgtacttgttttaaa
tgttcatactcttttccactgaactacaaatgtaatggctattatgtcat
atacctagacagtgattgtattattctgaaaaccttttcttgcaaggact
aaattaaattattttattgcctttttataaattttaaagtgatacttaag
acggctatgtatcactttagtttgctatttttttcctggggtgagtgaga
agaaatcatagctatagatatcagtaggaagccactggcatcaaacaaaa
cactatgcaactggagtccatactcagtttcatatagaaagaattacatg
ctatagtttgaaccctttgcagtttaaaatttaactgtgtaaggaaatag
acatgtgtcatttctctttcagcactgggacctcatctgccagatgtgtg
cagccctgttgtatgctgcacagtcctattgtcatataacaacatgtcat
gctgcatttagtagacctgtttctagggttctcatccttagaactttcac
tcttct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_62267539_62268339
seq2: B6Ng01-050O12.b_49_849 (reverse)

seq1  ACCACCACCACCACCACCAACAGCAACAGCAACAGCAACACTTACGAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCACCACCACCACCAACAGCAACAGCAACAGCAACACTTACGAAAT  50

seq1  AGTAGGAAACTTTTAACATCTAAGGTTGTTTTTCTAACATTTGTTTTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGGAAACTTTTAACATCTAAGGTTGTTTTTCTAACATTTGTTTTCTG  100

seq1  TATTGATTTTGGAAGCAATTGATATAATCCAGGGGAAATTTAGAGAATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGATTTTGGAAGCAATTGATATAATCCAGGGGAAATTTAGAGAATTT  150

seq1  CCTTTAACTGTTGATGTGAGCTATCATATAAGGTATGGTAATTTATCATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAACTGTTGATGTGAGCTATCATATAAGGTATGGTAATTTATCATC  200

seq1  ATATAATCATAGAAACAAATGAATCATTTTACTTTAAATACTGATATAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATCATAGAAACAAATGAATCATTTTACTTTAAATACTGATATAAT  250

seq1  ATGAGTTTATAAAGAATTTTTGTAAAAAAAAAACAGGTTTCATTTGTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTTTATAAAGAATTTTTGTAAAAAAAAAACAGGTTTCATTTGTTTT  300

seq1  GTTTTGATTTTAATACTTGCCTTTCTTATTGAACAATAAATAGAAAGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGATTTTAATACTTGCCTTTCTTATTGAACAATAAATAGAAAGTTT  350

seq1  GGTGAATTTTTACCTCTTTTTATGTAAGAAAAAGATGATGTTCCATGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAATTTTTACCTCTTTTTATGTAAGAAAAAGATGATGTTCCATGTTT  400

seq1  TTTTTACATTTCTTAATTAGCTTTTTGAGTGTAGGTATGACAGGAAGCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTACATTTCTTAATTAGCTTTTTGAGTGTAGGTATGACAGGAAGCAT  450

seq1  TAGTTCATAGTACTGTTATGTTAACGTGAACACGTGTATTCAGATAGACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCATAGTACTGTTATGTTAACGTGAACACGTGTATTCAGATAGACA  500

seq1  CTGATTAGTTTTTAAAAGATTGGTCTAAAGAGTTTCCACATTGGACATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTAGTTTTTAAAAGATTGGTCTAAAGAGTTTCCACATTGGACATAT  550

seq1  TAATTAGCACAGAACTATTCAATCATTTAGGAAACATAATAGTCTTAAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAGCACAGAACTATTCAATCATTTAGGAAACATAATAGTCTTAAGT  600

seq1  AAATTTGAAATTGTTTTGTCTCTTCTAATGGGATGAATTCTTTCCCTGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTGAAATTGTTTTGTCTCTTCTAATGGGATGAATTCTTTCCCTGTG  650

seq1  AGTGGCATTTGTGGGTATGACAAATGAGGATGAACTACACAGACGATCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCATTTGTGGGTATGACAAATGAGGATGAACTACACAGACGATCCT  700

seq1  TACTAAATAATGTTGAGCCTTACTTTCAAACTTAGAATGGCTGAAGAGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAAATAATGTTGAGCCTTACTTTCAAACTTAGAATGGCTGAAGAGTG  750

seq1  CATCTTCTTAATTTTCCATATAATTAAAATAAGATGCTTTTTAATGAATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTCTTAATTTTCCATATAATTAAAATAAGATGCTTTTTAATGAATT  800

seq1  C  801
      |
seq2  C  801

seq1: chr6_62142026_62143156
seq2: B6Ng01-050O12.g_68_1173

seq1  GAATTCACTTGTTTTTTTTCTTCCCTGGACACTCAAGTGTTATATTTGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTGTTTTTTTTCTTCCCTGGACACTCAAGTGTTATATTTGAA  50

seq1  TTCAAGTGTTATATTTAAATTGTTCAAATTTGTTGATTTTCGTTGTTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGTGTTATATTTAAATTGTTCAAATTTGTTGATTTTCGTTGTTTCT  100

seq1  TCCTGGGGCCTGTCTTTACTAAGAGCTTGTTAGGAGTCTCATGCTTGAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGGGCCTGTCTTTACTAAGAGCTTGTTAGGAGTCTCATGCTTGAGG  150

seq1  CACAGAAGTATGGAGACTCTTTAGATTGGGTCTCCCATGCTTTCACATGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAAGTATGGAGACTCTTTAGATTGGGTCTCCCATGCTTTCACATGT  200

seq1  AGTATCTCTAGTGACGGTTCCTCCCCTGCAGTTTCTACAAAGGGTTCTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATCTCTAGTGACGGTTCCTCCCCTGCAGTTTCTACAAAGGGTTCTTA  250

seq1  CTGTCTTAGGCCTGTTTCTGCTGTAGGTAAATAGAACTTTCTGCATCGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTTAGGCCTGTTTCTGCTGTAGGTAAATAGAACTTTCTGCATCGAT  300

seq1  TTCTCTATCGCTGACTTTTATGGCAAACGAAGTAATATAACCTTAGCCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTATCGCTGACTTTTATGGCAAACGAAGTAATATAACCTTAGCCCT  350

seq1  CTGACCTGAGTTCATTTTGTTCTCTTGTAATGATATGAGTGATGACTTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCTGAGTTCATTTTGTTCTCTTGTAATGATATGAGTGATGACTTCC  400

seq1  AAGGTATATATACAGTGAATATTGAAAAACTGGACATCAGGAATCAAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTATATATACAGTGAATATTGAAAAACTGGACATCAGGAATCAAATA  450

seq1  TTTGAAATACGCATATATGAGAGCATTTGCATTGACTTTGTCTCTCATGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAATACGCATATATGAGAGCATTTGCATTGACTTTGTCTCTCATGT  500

seq1  GAACCTTCATGTGTGCATTGGATGAGTCAGCTTTTCTGTAGTAGATGTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCTTCATGTGTGCATTGGATGAGTCAGCTTTTCTGTAGTAGATGTGA  550

seq1  TTTGAAAACTAAATCTGTATTGGATATATGAAGTTTGTACTTGTTTTAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAAACTAAATCTGTATTGGATATATGAAGTTTGTACTTGTTTTAAA  600

seq1  TGTTCATACTCTTTTCCACTGAACTACAAATGTAATGGCTATTATGTCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCATACTCTTTTCCACTGAACTACAAATGTAATGGCTATTATGTCAT  650

seq1  ATACCTAGACAGTGATTGTATTATTCTGAAAACCTTTTCTTGCAAGGACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTAGACAGTGATTGTATTATTCTGAAAACCTTTTCTTGCAAGGACT  700

seq1  AAATTAAATTATTTTATTGCCTTTTTATAAATTTTAAAGTGATACTTAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAAATTATTTTATTGCCTTTTTATAAATTTTAAAGTGATACTTAAG  750

seq1  ACGGCTATGTATCACTTTAGTTTGCTATTTTTTTCCTGGGGTGAGTGAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGCTATGTATCACTTTAGTTTGCTATTTTTTTCCTGGGGTGAGTGAGA  800

seq1  AGAAATCATAGCTATAGATATCAGTAGGAAGCCACTGGCATCAAACAAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATCATAGCTATAGATATCAGTAGGAAGCCACTGGCATCAAACAAAA  850

seq1  CACTATGCAACTGGAGTCCATACTCAGTTCCATTATAGAAAGAATTACAT  900
      ||||||||||||||||||||||||||||| || |||||||||||||||||
seq2  CACTATGCAACTGGAGTCCATACTCAGTTTCA-TATAGAAAGAATTACAT  899

seq1  GCTATAGTTTGAACCCTTTTGCAGTTTAAAATTTAACTGTGTTAGGGATA  950
      |||||||||||||||| |||||||||||||||||||||||| || ||| |
seq2  GCTATAGTTTGAACCC-TTTGCAGTTTAAAATTTAACTGTG-TAAGGAAA  947

seq1  TAGACATGTGTCCATTTCTCCTTTCAGCACTGGGACCCTCATCTGGCCCA  1000
      ||||||||||| ||||||| ||||||||||||||| |||||||||  |||
seq2  TAGACATGTGT-CATTTCT-CTTTCAGCACTGGGA-CCTCATCTG--CCA  992

seq1  GATGTGTGCAGGCCCTG-TGTATGCTGGCACAGTCTCTATTTGTTCATAT  1049
      |||||||||| |||||| |||||||| |||||||| |||||   ||||||
seq2  GATGTGTGCA-GCCCTGTTGTATGCT-GCACAGTC-CTATT--GTCATAT  1037

seq1  ATACCATACATTGTTCATGCTGCATTTAGTAGACCTTGTTTTCTTAGTGT  1099
      | ||   ||||   ||||||||||||||||||||| |||||   ||| ||
seq2  A-AC--AACAT--GTCATGCTGCATTTAGTAGACC-TGTTT--CTAGGGT  1079

seq1  TCTTCATCCTTTAGAACCTTTCCATCTCTTCT  1131
      || |||||| |||||| |||||   |||||||
seq2  TC-TCATCC-TTAGAA-CTTTC--ACTCTTCT  1106