BAC Information

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BAC

Clone NameB6Ng01-051B13
Chromosome6 (Build37)
Map Location 79,462,013 - 79,463,094
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC384440
Downstream geneLOC621815, LOC100043392, Lrrtm4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-051B13.bB6Ng01-051B13.g
ACCDH874840DH874841
length1,0821,150
definitionDH874840|Mus musculus domesticus DNA, BAC clone: B6Ng01-051B13, 5' end.DH874841|Mus musculus domesticus DNA, BAC clone: B6Ng01-051B13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaacacagtcctctgccacttcccaggcagtggagtcagtttcag
aaacacaaggcaagaatatcaacaggaactcaggtggcagcctaggccac
tcacatcaacctggccctctgaggcaacatagcccattgacatcaatgtg
gtttcaggctacagcacaggtcatggacatcctcatagtttttgctggta
acagagaccatgttagaaacatggacctagaaataacatcctggtggtag
tatgcatctggctatcaccttggcttcaggtggcaatgcaggccagtcag
atcaatatggtccctagagcatccagcatgactttaaggtgaaggacacc
ctacagacatctgcatggcttttagtggtgacatgagccatagacatcaa
cacagcccctggctgcagtaggaccacagacccaaacatggcccttagca
gttctattttagtcttaataagagaaaatgggacagaattttaaaggcat
tctatctcttttacatgtttctgttttgcttaccattttctttatttaga
gtttggagaagcaatcacatgtattttggagccagatgtcagtgctcaag
agtaagttctgatctcctatgatattagttgaggtctttgggattggggg
taagcttgtttatctgatgaaccatttcaccagtccatatgtttccttgg
atcctcaagacaatggcacttcatgaaattcttacctgcataagttgtat
aaataggccatgtctgcctagacctcaatgtggagagccgtgagcaatcg
ccatcatgagcctccgctgtgcctaactggtaaacaagtaatgtgcgcag
gttcgagagtaaattcgtgccaagtcactgcccatccccgggcgtagtag
tggggtgatgagtgagcagctaatcaagagctgacacgtcacacggaggg
gtatatatgcggcaccatttccttgtttggggtcttcttgcaaatgaagc
aataaacgttgccataaaagaatcgggttgtccaatgatttcttgctggc
gagatactatcctcaggaaccttcataatata
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagataaaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtatggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttactgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctagtggatggatcacaggctcccaa
tgaggagctagagaaatacccaagagctaaaggatctcaacgtataggtg
gacacattatgaactaaccagtaccctgagctctgactctagctgcattt
gttcaaagatgctagtgcatcatgaaaagaagcccattgaccccaacttt
gagtgtctgtaacaggtaacgccaggccaatggaggggagtgtggtgatt

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_79462013_79463094
seq2: B6Ng01-051B13.b_47_1128 (reverse)

seq1  TATAT--TGAGGTATCCTGA-GCTAGTATCTCGCCAGCAAGAAATCACTC  47
      |||||  ||| |  |||||| | |||||||||||||||||||||||| | 
seq2  TATATTATGAAGGTTCCTGAGGATAGTATCTCGCCAGCAAGAAATCA-TT  49

seq1  GGACAACCGGATTCTTCTATGGCAACGCTTTATTGCTTCATCTGCAGGAA  97
      |||||||| ||||||| |||||||||| ||||||||||||| |||| |||
seq2  GGACAACCCGATTCTTTTATGGCAACG-TTTATTGCTTCATTTGCAAGAA  98

seq1  GACCCCAAACAAGGAAAATGGTGCCGCCTATATACCCCTCCGTGTGACGT  147
      |||||||||||||| |||||||||||| ||||||||||||||||||||||
seq2  GACCCCAAACAAGG-AAATGGTGCCGCATATATACCCCTCCGTGTGACGT  147

seq1  GTCAGCTCTTGATTAGCTGCTCACTCATCACCCCACTACTACGCCCGGGG  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGCTCTTGATTAGCTGCTCACTCATCACCCCACTACTACGCCCGGGG  197

seq1  ATGGGCAGTGACTTGGCACGAATTTACTCTCGAACCTGCGCACATTACTT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCAGTGACTTGGCACGAATTTACTCTCGAACCTGCGCACATTACTT  247

seq1  GTTTACCAGTTAGGCACAGCGGAGGCTCATGATGGCGATTGCTCACGGCT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACCAGTTAGGCACAGCGGAGGCTCATGATGGCGATTGCTCACGGCT  297

seq1  CTCCACATTGAGGTCTAGGCAGACATGGCCTATTTATACAACTTATGCAG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACATTGAGGTCTAGGCAGACATGGCCTATTTATACAACTTATGCAG  347

seq1  GTAAGAATTTCATGAAGTGCCATTGTCTTGAGGATCCAAGGAAACATATG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGAATTTCATGAAGTGCCATTGTCTTGAGGATCCAAGGAAACATATG  397

seq1  GACTGGTGAAATGGTTCATCAGATAAACAAGCTTACCCCCAATCCCAAAG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGGTGAAATGGTTCATCAGATAAACAAGCTTACCCCCAATCCCAAAG  447

seq1  ACCTCAACTAATATCATAGGAGATCAGAACTTACTCTTGAGCACTGACAT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCAACTAATATCATAGGAGATCAGAACTTACTCTTGAGCACTGACAT  497

seq1  CTGGCTCCAAAATACATGTGATTGCTTCTCCAAACTCTAAATAAAGAAAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTCCAAAATACATGTGATTGCTTCTCCAAACTCTAAATAAAGAAAA  547

seq1  TGGTAAGCAAAACAGAAACATGTAAAAGAGATAGAATGCCTTTAAAATTC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAAGCAAAACAGAAACATGTAAAAGAGATAGAATGCCTTTAAAATTC  597

seq1  TGTCCCATTTTCTCTTATTAAGACTAAAATAGAACTGCTAAGGGCCATGT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCATTTTCTCTTATTAAGACTAAAATAGAACTGCTAAGGGCCATGT  647

seq1  TTGGGTCTGTGGTCCTACTGCAGCCAGGGGCTGTGTTGATGTCTATGGCT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTCTGTGGTCCTACTGCAGCCAGGGGCTGTGTTGATGTCTATGGCT  697

seq1  CATGTCACCACTAAAAGCCATGCAGATGTCTGTAGGGTGTCCTTCACCTT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCACCACTAAAAGCCATGCAGATGTCTGTAGGGTGTCCTTCACCTT  747

seq1  AAAGTCATGCTGGATGCTCTAGGGACCATATTGATCTGACTGGCCTGCAT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCATGCTGGATGCTCTAGGGACCATATTGATCTGACTGGCCTGCAT  797

seq1  TGCCACCTGAAGCCAAGGTGATAGCCAGATGCATACTACCACCAGGATGT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACCTGAAGCCAAGGTGATAGCCAGATGCATACTACCACCAGGATGT  847

seq1  TATTTCTAGGTCCATGTTTCTAACATGGTCTCTGTTACCAGCAAAAACTA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTAGGTCCATGTTTCTAACATGGTCTCTGTTACCAGCAAAAACTA  897

seq1  TGAGGATGTCCATGACCTGTGCTGTAGCCTGAAACCACATTGATGTCAAT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGATGTCCATGACCTGTGCTGTAGCCTGAAACCACATTGATGTCAAT  947

seq1  GGGCTATGTTGCCTCAGAGGGCCAGGTTGATGTGAGTGGCCTAGGCTGCC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTATGTTGCCTCAGAGGGCCAGGTTGATGTGAGTGGCCTAGGCTGCC  997

seq1  ACCTGAGTTCCTGTTGATATTCTTGCCTTGTGTTTCTGAAACTGACTCCA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGAGTTCCTGTTGATATTCTTGCCTTGTGTTTCTGAAACTGACTCCA  1047

seq1  CTGCCTGGGAAGTGGCAGAGGACTGTGTTGAATTC  1082
      |||||||||||||||||||||||||||||||||||
seq2  CTGCCTGGGAAGTGGCAGAGGACTGTGTTGAATTC  1082