BAC Information

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BAC

Clone NameB6Ng01-052G14
Chromosome6 (Build37)
Map Location 53,483,118 - 53,617,168
singlet/doubletdoublet
Overlap geneCreb5
Upstream geneHibadh, Tax1bp1, Jazf1, LOC666259, LOC666516, D430007I03
Downstream geneLOC384386, 1200009O22Rik, Cpvl, LOC666305, Chn2, LOC100042056, Prr15, EG640926, Wipf3, Scrn1, Fkbp14, Plekha8, LOC100041292
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-052G14.bB6Ng01-052G14.g
ACCDH875775DH875776
length1,000984
definitionDH875775|Mus musculus domesticus DNA, BAC clone: B6Ng01-052G14, 5' end.DH875776|Mus musculus domesticus DNA, BAC clone: B6Ng01-052G14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(53,616,171 - 53,617,168)(53,483,118 - 53,484,102)
sequence
gaattccagtgctttgacctagagacatataagttagacagatattgttc
tgaattcaagcatgattttaaaaataaacacattaaaaaaaaagcctggt
attggtggcacacacctttaatcccagcacttggaaagcaaaggcaggcg
aatttctgagttcgaggccagcctggtctacagtgagatctaggacagag
aaactacacagagaaaccctgtctcgaaaaaccgaaagaaaaaaaaaaga
catatgaactgtcaagggtaaaggcgaactcagtgcagtactagtgtctg
taggcagatataggtagagtctatttattctgagaagagactgttgtcag
gacaacagagaaaaacgtttgaaatgcaatttaaagtcatgtgggttgta
cacctgagatttccttaatccagggcctccaaaagacttgctgatttgaa
ggtatagtgtggggctaaagtggctttcacttccatattcgcatgctcag
tggagcacagctgtacaacttggaccttaatgtactgaggctctccacta
aatgttccatggttctcttttgaaaccataagacggttcatctggcctca
cttcagctaggctaatggcagcctacctcccaaagattcctttgccgttt
ccaactggcaaaccctggcttcatttcctctggtgctggagggatcacag
agaagggctggcttggcatggaagttttctttcagcactgccccggcact
ttggggagacagtgctccttctctgagcacacattctctgagcacttttc
tctctgcacagtaagaaagagctgggatgagaggacctttcccattccta
tccaaggagcttggcgttcactctgtaactccctctgctgggtgatatgg
tgtatcatagagattagtttagggttgctgagtcaatagagacaccagaa
gtccaagggcttattcacatctttgaatcatacatatcaaatatacgtgg

gaattcactggagttttgcaagcaactgagctatatagattataaaatct
ggaaatacagaggaaaaacagaatagttacccatatccatgactacttgg
tggactcaaccaccattgttactgagaacagaaagaatagagtctggagg
tggctatatcaggaagtaatcaaacatcaaggaagtttcatttatttgaa
gacaaaaagcttccccagggtgcaggttcattttatatgtttaattgctt
gggctaaggcaaacccacagctggtaaagcaccgcctctaggtgtatgcc
tgcttctggaggaagttagtgcttatattagcgggctgaatcagaacgat
tcctccaccaatgacaggcagcagcatccactccatcaaaggcccagata
gaacacagaggctgtggaagggtaagcttgcccatgtgggttggagcacc
catcattccagccttagagtatcatattcttagttctccagcttggggct
cagccacgcccttatgctactgaacttctgggcttcaagccttcaggctg
ggatggaagtgcaccatcctgtgtcttggtccctctcaatttgtcatttt
gtggaccagttcctagtattaaatctctctagctcttcttgtctgttgat
catctttctctctgggtgggagttagggaggcctttcttttcatgaggca
gcttctcagccttgttttttgtttgtttgttttttgttttgtttttgttt
ttgtttgtttgtttgttttttgttttttcgagacagggtttctctgtata
gccctgcctgttccactttgtagatcaggctggcctcgaactcagaaatc
cacctgcctctgcctcccgagtgctgggattaaaggtgtgcgccaccaca
acccggctttgttttttttttgagcattctgcacatgctagaaaatcaag
gggaaatggaagatagacttccttcgctcttcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_53616171_53617168
seq2: B6Ng01-052G14.b_43_1042 (reverse)

seq1  CCACGTATATTTGATATGTTATGCTCTAAAGATGTGAGTTAGCCTTGGGA  50
      |||||||||||||||||| |||| |  |||||||||| | |||| | |||
seq2  CCACGTATATTTGATATG-TATGATTCAAAGATGTGAATAAGCCCTTGGA  49

seq1  CTTCTGGTGTCTCTATTGAACTCAGCAA-CCTAAACTAATCTCTATGATA  99
      |||||||||||||||||| ||||||||| |||||||||||||||||||||
seq2  CTTCTGGTGTCTCTATTG-ACTCAGCAACCCTAAACTAATCTCTATGATA  98

seq1  CCACCATATCACCCAGCAGA-GGAGTTACAGAGTGAACGCCAAGCTCCTT  148
       ||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  -CACCATATCACCCAGCAGAGGGAGTTACAGAGTGAACGCCAAGCTCCTT  147

seq1  GGATAGGAATGGGAAAGGTCCTCTCAT-CCAGCTCTTTCTTACTGTGCAG  197
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GGATAGGAATGGGAAAGGTCCTCTCATCCCAGCTCTTTCTTACTGTGCAG  197

seq1  AGAG-AAAGTGCTCAGAGAATGTGTGCTCAGAGAAGGAGCACTGTCTCCC  246
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAAAGTGCTCAGAGAATGTGTGCTCAGAGAAGGAGCACTGTCTCCC  247

seq1  C-AAGTGCCGGGGCAGTGCTGAAAGAAAACTTCCATGCCAAGCCAGCCCT  295
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTGCCGGGGCAGTGCTGAAAGAAAACTTCCATGCCAAGCCAGCCCT  297

seq1  TCTCTGTGATCCCTCCAGCACCAGAGGAAATGAAGCCAGGGTTTGCCAGT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTGATCCCTCCAGCACCAGAGGAAATGAAGCCAGGGTTTGCCAGT  347

seq1  TGGAAACGGCAAAGGAATCTTTGGGAGGTAGGCTGCCATTAGCCTAGCTG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAACGGCAAAGGAATCTTTGGGAGGTAGGCTGCCATTAGCCTAGCTG  397

seq1  AAGTGAGGCCAGATGAACCGTCTTATGGTTTCAAAAGAGAACCATGGAAC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAGGCCAGATGAACCGTCTTATGGTTTCAAAAGAGAACCATGGAAC  447

seq1  ATTTAGTGGAGAGCCTCAGTACATTAAGGTCCAAGTTGTACAGCTGTGCT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGTGGAGAGCCTCAGTACATTAAGGTCCAAGTTGTACAGCTGTGCT  497

seq1  CCACTGAGCATGCGAATATGGAAGTGAAAGCCACTTTAGCCCCACACTAT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGAGCATGCGAATATGGAAGTGAAAGCCACTTTAGCCCCACACTAT  547

seq1  ACCTTCAAATCAGCAAGTCTTTTGGAGGCCCTGGATTAAGGAAATCTCAG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCAAATCAGCAAGTCTTTTGGAGGCCCTGGATTAAGGAAATCTCAG  597

seq1  GTGTACAACCCACATGACTTTAAATTGCATTTCAAACGTTTTTCTCTGTT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTACAACCCACATGACTTTAAATTGCATTTCAAACGTTTTTCTCTGTT  647

seq1  GTCCTGACAACAGTCTCTTCTCAGAATAAATAGACTCTACCTATATCTGC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGACAACAGTCTCTTCTCAGAATAAATAGACTCTACCTATATCTGC  697

seq1  CTACAGACACTAGTACTGCACTGAGTTCGCCTTTACCCTTGACAGTTCAT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGACACTAGTACTGCACTGAGTTCGCCTTTACCCTTGACAGTTCAT  747

seq1  ATGTCTTTTTTTTTTCTTTCGGTTTTTCGAGACAGGGTTTCTCTGTGTAG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTTTTTTTTTTCTTTCGGTTTTTCGAGACAGGGTTTCTCTGTGTAG  797

seq1  TTTCTCTGTCCTAGATCTCACTGTAGACCAGGCTGGCCTCGAACTCAGAA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTGTCCTAGATCTCACTGTAGACCAGGCTGGCCTCGAACTCAGAA  847

seq1  ATTCGCCTGCCTTTGCTTTCCAAGTGCTGGGATTAAAGGTGTGTGCCACC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCGCCTGCCTTTGCTTTCCAAGTGCTGGGATTAAAGGTGTGTGCCACC  897

seq1  AATACCAGGCTTTTTTTTTAATGTGTTTATTTTTAAAATCATGCTTGAAT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACCAGGCTTTTTTTTTAATGTGTTTATTTTTAAAATCATGCTTGAAT  947

seq1  TCAGAACAATATCTGTCTAACTTATATGTCTCTAGGTCAAAGCACTGGAA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAACAATATCTGTCTAACTTATATGTCTCTAGGTCAAAGCACTGGAA  997

seq1  TTC  998
      |||
seq2  TTC  1000

seq1: chr6_53483118_53484102
seq2: B6Ng01-052G14.g_67_1050

seq1  GAATTCACTGGAGTTTTGCAAGCAACTGAGCTATATAGATTATAAAATCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGGAGTTTTGCAAGCAACTGAGCTATATAGATTATAAAATCT  50

seq1  GGAAATACAGAGGAAAAACAGAATAGTTACCCATATCCATGACTACTTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATACAGAGGAAAAACAGAATAGTTACCCATATCCATGACTACTTGG  100

seq1  TGGACTCAACCACCATTGTTACTGAGAACAGAAAGAATAGAGTCTGGAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTCAACCACCATTGTTACTGAGAACAGAAAGAATAGAGTCTGGAGG  150

seq1  TGGCTATATCAGGAAGTAATCAAACATCAAGGAAGTTTCATTTATTTGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTATATCAGGAAGTAATCAAACATCAAGGAAGTTTCATTTATTTGAA  200

seq1  GACAAAAAGCTTCCCCAGGGTGCAGGTTCATTTTATATGTTTAATTGCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAAAGCTTCCCCAGGGTGCAGGTTCATTTTATATGTTTAATTGCTT  250

seq1  GGGCTAAGGCAAACCCACAGCTGGTAAAGCACCGCCTCTAGGTGTATGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTAAGGCAAACCCACAGCTGGTAAAGCACCGCCTCTAGGTGTATGCC  300

seq1  TGCTTCTGGAGGAAGTTAGTGCTTATATTAGCGGGCTGAATCAGAACGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCTGGAGGAAGTTAGTGCTTATATTAGCGGGCTGAATCAGAACGAT  350

seq1  TCCTCCACCAATGACAGGCAGCAGCATCCACTCCATCAAAGGCCCAGATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCACCAATGACAGGCAGCAGCATCCACTCCATCAAAGGCCCAGATA  400

seq1  GAACACAGAGGCTGTGGAAGGGTAAGCTTGCCCATGTGGGTTGGAGCACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACAGAGGCTGTGGAAGGGTAAGCTTGCCCATGTGGGTTGGAGCACC  450

seq1  CATCATTCCAGCCTTAGAGTATCATATTCTTAGTTCTCCAGCTTGGGGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATTCCAGCCTTAGAGTATCATATTCTTAGTTCTCCAGCTTGGGGCT  500

seq1  CAGCCACGCCCTTATGCTACTGAACTTCTGGGCTTCAAGCCTTCAGGCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCACGCCCTTATGCTACTGAACTTCTGGGCTTCAAGCCTTCAGGCTG  550

seq1  GGATGGAAGTGCACCATCCTGTGTCTTGGTCCCTCTCAATTTGTCATTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGAAGTGCACCATCCTGTGTCTTGGTCCCTCTCAATTTGTCATTTT  600

seq1  GTGGACCAGTTCCTAGTATTAAATCTCTCTAGCTCTTCTTGTCTGTTGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGACCAGTTCCTAGTATTAAATCTCTCTAGCTCTTCTTGTCTGTTGAT  650

seq1  CATCTTTCTCTCTGGGTGGGAGTTAGGGAGGCCTT--CTTTCATGAGGCA  698
      |||||||||||||||||||||||||||||||||||   ||||||||||||
seq2  CATCTTTCTCTCTGGGTGGGAGTTAGGGAGGCCTTTCTTTTCATGAGGCA  700

seq1  GCTTCTCAGCCTTGTTTTTTGTTTGTTTGTTTTTTGTTTTGTTTTTGTTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTCAGCCTTGTTTTTTGTTTGTTTGTTTTTTGTTTTGTTTTTGTTT  750

seq1  TTGTTTGTTTGTTTGTTTTTTGTTTTTTTCGAGACAGGGTTTCTCTGTAT  798
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TTGTTTGTTTGTTTGTTTTTTG-TTTTTTCGAGACAGGGTTTCTCTGTAT  799

seq1  AGCCCTGCCTG-TCCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAAT  847
      ||||||||||| ||||||||||||| ||||||||||||||||||||||||
seq2  AGCCCTGCCTGTTCCACTTTGTAGATCAGGCTGGCCTCGAACTCAGAAAT  849

seq1  CCACCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGTGCGCCACCAC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGTGCGCCACCAC  899

seq1  -ACCCGGCTTGTTTTGTTTTTTGAGCAGTCTGCACATGCCAAGAAAATCA  946
       |||||||||  ||| ||||||||||| |||||||||| | |||||||||
seq2  AACCCGGCTTTGTTTTTTTTTTGAGCATTCTGCACATG-CTAGAAAATCA  948

seq1  AGGGGAAGTGGAAGAGTAGAACTTCAGTCACATCTTCCA  985
      ||||||| ||||||| ||| |||||  || | |||||||
seq2  AGGGGAAATGGAAGA-TAG-ACTTCCTTCGC-TCTTCCA  984