BAC Information

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BAC

Clone NameB6Ng01-053N12
Chromosome6 (Build37)
Map Location 124,735,440 - 124,736,158
singlet/doubletsinglet
Overlap genenone
Upstream geneEG243628, EG545874, LOC384484, LOC623282, V2r1b, EG384486, Vmn2r-ps34, Vmn2r27, LOC623374, EG622297, Cd163, LOC100043530, 1700013D24Rik, 1700027F06Rik, 1700060L04Rik, Pex5, Clstn3, C1rl, C1r, C1s, LOC667277, EG317677, Mboat5, Emg1, Phb2, Ptpn6, Grcc10, Atn1, Eno2, Lrrc23
Downstream geneSpsb2, Tpi1, Usp5, Cdca3, Gnb3, Leprel2, Gpr162, Cd4, Lag3, Ptms, Mlf2, EG667343, Cops7a, C530028O21Rik, Zfp384, Ing4, Acrbp, Gpr92, Chd4, Nol1, A930037G23Rik, Gapdh, Ncapd2, Mrpl51, Vamp1, Tapbpl, Cd27, 4930417O13Rik, Tuba3a, Ltbr, Scnn1a, Tnfrsf1a, Plekhg6, Cd9, Vwf, Tmem16b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-053N12.bB6Ng01-053N12.g
ACCDH876766DH876767
length1,261719
definitionDH876766|Mus musculus domesticus DNA, BAC clone: B6Ng01-053N12, 5' end.DH876767|Mus musculus domesticus DNA, BAC clone: B6Ng01-053N12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccagttttatgtctgataccaaattccttacaaaatgaaataaaa
ttgttgcaagtataggatggcccattatttgtcttaatgactttaggcaa
tcccatagcattaaaggcttgtaaacaatgatcaattacatttctagagg
cctctcccatatgtagagaaacaaaaagaaatcctgaacaagtgtcaata
caaacatgtatatattttaattttccagattctgcataatgagttacatc
catttgccaaatatgattgggtataagacctcgtggattcactcctaaat
gaggaactggagataatgtaatacatttagagcactgttttacaatcatt
cttgcctgctctttagtgatcttgtgtcagagccttaaggtacagctaga
gagatgaaatttatcatgatcacatctagccaatgcaacaggatctgaaa
ttaaggcctctcctattagagctctgtcaatgcaatcattgcctgcagct
aaaggtccaggaagaccagaatgagctctttatgaccaatataaaacgga
tgttttcgagcaagaatgatgttttgcaattgtgcaaacagagatcctgc
tggcgtattaaagttaaacgtaccacaagtctccaatatgggaattgatt
gtgcaacatataaactatcagtaaaaatattaaaagcatcatttacaggc
tgaaaaacattcaataccactgtcaactctgctaactgagctgagaggcc
aggagtctctatgactacctgttgattattcataagatatccagctcgcc
ctttagaggagccatcagtaaaaatcaaaagagcattatacaaaaactgt
aaagagttcatattagggaatatcacctcatgtacattttaaactttagc
agcctatcttgaggataatgattatctataatttctataatcctattgag
cagcatctgtactgtgctactttggcaagtatcttgatctacactataag
ctgaacaatgatatctggctctttcccaaataagtgcctgctttcttcca
gtatgatcatcttgagctactgtttcatataatggcaggatattacactt
aggagactcctcaatttatccacattagaggagcttggcccaacatcttg
tagcagtggaacattaaattacgatgtaaaggcagataatctacagacca
tgtctcgatgccttcccatgttgtaggcgcaatcctctcgaagttaaaga
accgtagtgat
gaattcatctctttgttgttgttttgatacaaggtcttgctatgcagccc
agtctaagcaaggaaagagagatggggaaattatagagctatggggagcg
aaaggagttcccctccccagaatctgactggtctctctcaccagcagaga
agtgtccttactcctgttgaagacagttgatgatgttctctgcggagatt
ttgatgacgcagagataacaatttctgggagtctcagactagactatcaa
cttggtttgcagtagagatccctgtggaatcttgtctactgcagtgccct
tcggtgcccgcaggaaccacctgtttagcttctttttgaccctttgaaga
aaatagcttcaaatcaccaacattttatatatgattacgttaaagaccat
gaggtccactcttggagaaaagggaggagggctctcaggcgggcttaact
ttcttttcaaatgcttctttcccactcttttttttttatttttttatttt
tttattatatgtacgtacactgtagctgtcttcagacacaccagaagagg
gcgtcagatctcgttacggatggttgtgagccaccatgtggttgctggga
tttgaactccggacctttggaagagcagtcgggtgctcttacccactgag
ccatctcaccagccccctctttcccactcttaactggcatgtttagagtc
tgtgtgtgtgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_124735440_124736158
seq2: B6Ng01-053N12.g_70_788 (reverse)

seq1  ACACACACACACACACACAGACTCTAAACATGCCAGTTAAGAGTGGGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACAGACTCTAAACATGCCAGTTAAGAGTGGGAAA  50

seq1  GAGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTC  100

seq1  CAAAGGTCCGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGTCCGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCAT  150

seq1  CCGTAACGAGATCTGACGCCCTCTTCTGGTGTGTCTGAAGACAGCTACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTAACGAGATCTGACGCCCTCTTCTGGTGTGTCTGAAGACAGCTACAG  200

seq1  TGTACGTACATATAATAAAAAAATAAAAAAATAAAAAAAAAAGAGTGGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACGTACATATAATAAAAAAATAAAAAAATAAAAAAAAAAGAGTGGGA  250

seq1  AAGAAGCATTTGAAAAGAAAGTTAAGCCCGCCTGAGAGCCCTCCTCCCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGCATTTGAAAAGAAAGTTAAGCCCGCCTGAGAGCCCTCCTCCCTT  300

seq1  TTCTCCAAGAGTGGACCTCATGGTCTTTAACGTAATCATATATAAAATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCAAGAGTGGACCTCATGGTCTTTAACGTAATCATATATAAAATGT  350

seq1  TGGTGATTTGAAGCTATTTTCTTCAAAGGGTCAAAAAGAAGCTAAACAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGATTTGAAGCTATTTTCTTCAAAGGGTCAAAAAGAAGCTAAACAGG  400

seq1  TGGTTCCTGCGGGCACCGAAGGGCACTGCAGTAGACAAGATTCCACAGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCCTGCGGGCACCGAAGGGCACTGCAGTAGACAAGATTCCACAGGG  450

seq1  ATCTCTACTGCAAACCAAGTTGATAGTCTAGTCTGAGACTCCCAGAAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTACTGCAAACCAAGTTGATAGTCTAGTCTGAGACTCCCAGAAATT  500

seq1  GTTATCTCTGCGTCATCAAAATCTCCGCAGAGAACATCATCAACTGTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATCTCTGCGTCATCAAAATCTCCGCAGAGAACATCATCAACTGTCTT  550

seq1  CAACAGGAGTAAGGACACTTCTCTGCTGGTGAGAGAGACCAGTCAGATTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGGAGTAAGGACACTTCTCTGCTGGTGAGAGAGACCAGTCAGATTC  600

seq1  TGGGGAGGGGAACTCCTTTCGCTCCCCATAGCTCTATAATTTCCCCATCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGAGGGGAACTCCTTTCGCTCCCCATAGCTCTATAATTTCCCCATCT  650

seq1  CTCTTTCCTTGCTTAGACTGGGCTGCATAGCAAGACCTTGTATCAAAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTCCTTGCTTAGACTGGGCTGCATAGCAAGACCTTGTATCAAAACA  700

seq1  ACAACAAAGAGATGAATTC  719
      |||||||||||||||||||
seq2  ACAACAAAGAGATGAATTC  719