BAC Information

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BAC

Clone NameB6Ng01-055I06
Chromosome6 (Build37)
Map Location 26,136,114 - 26,137,252
singlet/doubletsinglet
Overlap geneLOC100041210
Upstream geneGpr37, Pot1a, EG626912
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-055I06.bB6Ng01-055I06.g
ACCDH877940DH877941
length1,124703
definitionDH877940|Mus musculus domesticus DNA, BAC clone: B6Ng01-055I06, 5' end.DH877941|Mus musculus domesticus DNA, BAC clone: B6Ng01-055I06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagaaactttctaagaatagaagcattatgtcagtattatattta
gtaaaaataataatattatttccattaaagccttctattctgataaaagc
atgacatgagcatgtctgcaaagaattgattatttctttttctgacccaa
atattgcatgagctgaaagcttcagaattaggcagatgtaaattctctta
cttgccagtcagtgcatagaaccatttcttctattgtcgaggttagaagt
aaaagtataaaaataggaaaaaattgacatgagaaaaataagtcctaggt
ctccaatttctctacatggcaaggctattataaaattgcttttttcttca
ttcacactatattatttttcctaacgtcttgcagaaattacaacccctgt
atggcatctaagaattatacaacatgtttatttatttgtttgtcctgttg
attcctgccatgtactgaagttttctctattgtaccatttctacaattca
gattaatcctttccaaataacacagggtccttgagattacttacactggg
aaacagattatatatttgcaatatcccttataacttgtttcttctcctat
tataatctgttttctaaacaattgccctctcaaattgaaaaatatgacag
atttttgtctttgttctttgctaagctgtaatcagagaacactttactaa
atgaaatgctatgtaacaaatgaaatgcataatttggcccatatatgagc
aattagagaagagaaaaatacacctggttgatctcatgtgtagaatgcaa
ggcataatctattatttatgctaactaaggtagctgctatgatttgacta
tgattaaagtgtagcctcccatgcttcagtttttggaactaactttgcca
tgcaggttccttgggcctttaagacattagactagatagatagagctcat
ccaggaagggatactatggaagatattcatttggcaaattgatttgtctc
agtcagagtgtataaaaaaaaaatgctgactctgattgtctttggtttct
gtgtcttctgatgtgacctctcctctccctgctactgtcatatggaatag
tttattggggggtatgtattacat

gaattctctgtttagttctatagcaccccccttttagattgaggtatttg
attatttggtgtgtaacttcttgagttctttgtatactttggatattagc
actctatcagatgtagagttggtgaagatcttttcccaatctgtaggctg
ctattttggcctattgacagtgtcctttgactgaggcacatgtagataca
gccaaacactagactgaagtcagggacccctatggaagagttaggagatg
ggttgaaggagttgaaggggatttcaaccccataggtttttttgtttgtt
tgtttgggtttttgttcatttgtttgtttgtttttgtttgttttgttttg
tttttcatctgaagttgtgaattggtctttccatgtctatgaagaatttg
tgttggaattttggtgagatttacattgaatcagcacattgcttttggca
agatggtgttttcactatgttaatcctaccaatccctcagcatgggattg
aaagagtagtaaaactcagtgctccaaggtatgctaatcataaagcagat
aactacattccttcctccacccacctgcttcctgggttcaaagagtgttc
attcaaagaaagtcaccctgactcaccctgacattgctggaacccactat
gcaaaggtgctattggctaggggctcttaaattgttagggctcttaaact
tct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_26136114_26137252
seq2: B6Ng01-055I06.b_45_1168

seq1  GAATTCAGAAACTTTCTAAGAATAGAAGCATTATGTCAGTATTATATTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAAACTTTCTAAGAATAGAAGCATTATGTCAGTATTATATTTA  50

seq1  GTAAAAATAATAATATTATTTCCATTAAAGCCTTCTATTCTGATAAAAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAAATAATAATATTATTTCCATTAAAGCCTTCTATTCTGATAAAAGC  100

seq1  ATGACATGAGCATGTCTGCAAAGAATTGATTATTTCTTTTTCTGACCCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACATGAGCATGTCTGCAAAGAATTGATTATTTCTTTTTCTGACCCAA  150

seq1  ATATTGCATGAGCTGAAAGCTTCAGAATTAGGCAGATGTAAATTCTCTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGCATGAGCTGAAAGCTTCAGAATTAGGCAGATGTAAATTCTCTTA  200

seq1  CTTGCCAGTCAGTGCATAGAACCATTTCTTCTATTGTCGAGGTTAGAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCAGTCAGTGCATAGAACCATTTCTTCTATTGTCGAGGTTAGAAGT  250

seq1  AAAAGTATAAAAATAGGAAAAAATTGACATGAGAAAAATAAGTCCTAGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTATAAAAATAGGAAAAAATTGACATGAGAAAAATAAGTCCTAGGT  300

seq1  CTCCAATTTCTCTACATGGCAAGGCTATTATAAAATTGCTTTTTTCTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAATTTCTCTACATGGCAAGGCTATTATAAAATTGCTTTTTTCTTCA  350

seq1  TTCACACTATATTATTTTTCCTAACGTCTTGCAGAAATTACAACCCCTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACACTATATTATTTTTCCTAACGTCTTGCAGAAATTACAACCCCTGT  400

seq1  ATGGCATCTAAGAATTATACAACATGTTTATTTATTTGTTTGTCCTGTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCATCTAAGAATTATACAACATGTTTATTTATTTGTTTGTCCTGTTG  450

seq1  ATTCCTGCCATGTACTGAAGTTTTCTCTATTGTACCATTTCTACAATTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTGCCATGTACTGAAGTTTTCTCTATTGTACCATTTCTACAATTCA  500

seq1  GATTAATCCTTTCCAAATAACACAGGGTCCTTGAGATTACTTACACTGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAATCCTTTCCAAATAACACAGGGTCCTTGAGATTACTTACACTGGG  550

seq1  AAACAGATTATATATTTGCAATATCCCTTATAACTTGTTTCTTCTCCTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGATTATATATTTGCAATATCCCTTATAACTTGTTTCTTCTCCTAT  600

seq1  TATAATCTGTTTTCTAAACAATTGCCCTCTCAAATTGAAAAATATGACAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATCTGTTTTCTAAACAATTGCCCTCTCAAATTGAAAAATATGACAG  650

seq1  ATTTTTGTCTTTGTTCTTTGCTAAGCTGTAATCAGAGAACACTTTACTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGTCTTTGTTCTTTGCTAAGCTGTAATCAGAGAACACTTTACTAA  700

seq1  ATGAAATGCTATGTAACAAATGAAATGCATAATTTGGCCCATATATGAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATGCTATGTAACAAATGAAATGCATAATTTGGCCCATATATGAGC  750

seq1  AATTAGAGAAGAGAAAAATACACCTGGTTGATCTCATGTGTAGAATGCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGAGAAGAGAAAAATACACCTGGTTGATCTCATGTGTAGAATGCAA  800

seq1  GGCATAATCTATTATTTATGCTAACTAAGGTAGCTGCTATGATTTGACTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATAATCTATTATTTATGCTAACTAAGGTAGCTGCTATGATTTGACTA  850

seq1  TGATTAAAGTGTAGCCTCCCATGCTTCAGTTTTTGGAACTAACTTTGCCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTAAAGTGTAGCCTCCCATGCTTCAGTTTTTGGAACTAACTTTGCCA  900

seq1  TGCAGGGTTCCTTGGGCCTTTAAGACATTAGACTAGATAGATAAGAGCTC  950
      |||| ||||||||||||||||||||||||||||||||||||| |||||||
seq2  TGCA-GGTTCCTTGGGCCTTTAAGACATTAGACTAGATAGAT-AGAGCTC  948

seq1  ATCCAGGAAGGGATACTATGGAAGATATTCATTTGGCAAATTGAATTTGT  1000
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  ATCCAGGAAGGGATACTATGGAAGATATTCATTTGGCAAATTG-ATTTGT  997

seq1  CTCAGTCAGAGTGTATTAAAAAAAAAAATGCCTGACCTCTGAATTGTCCT  1050
      ||||||||||||||||  |||||||||||| |||| ||||| ||||| ||
seq2  CTCAGTCAGAGTGTAT--AAAAAAAAAATG-CTGA-CTCTG-ATTGT-CT  1041

seq1  TTGGTTTCCTGTGTCTTCTGGATGTGACCTCTCCTCTCCCCTGCTACTGT  1100
      ||||||| ||||||||||| ||||||||||||||||| ||||||||||||
seq2  TTGGTTT-CTGTGTCTTCT-GATGTGACCTCTCCTCT-CCCTGCTACTGT  1088

seq1  CATATGGAGATTAGTTTATTGTGGTGTATGTATTTACAT  1139
      ||||||  || |||||||||| || ||||||| ||||||
seq2  CATATG--GAATAGTTTATTGGGGGGTATGTA-TTACAT  1124


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