BAC Information

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BAC

Clone NameB6Ng01-057A04
Chromosome6 (Build37)
Map Location 94,795,920 - 94,797,020
singlet/doubletsinglet
Overlap genenone
Upstream geneMagi1, LOC100043262, LOC665856, Slc25a26, Lrig1, LOC625941, EG665865
Downstream geneLOC100043276, LOC100043680, Kbtbd8, LOC435912, Suclg2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-057A04.bB6Ng01-057A04.g
ACCDH879003DH879004
length1,091119
definitionDH879003|Mus musculus domesticus DNA, BAC clone: B6Ng01-057A04, 5' end.DH879004|Mus musculus domesticus DNA, BAC clone: B6Ng01-057A04, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgaatattttctctgggtctgtgttgtcacgggaagctgacagt
cattggatatcatcctgagctgctactgagtcttctcagcatgctgtaag
ggagtgagagttaccaggacaagcctagcattcaaatttcaactctcact
ttactatctgcacaggtggcacctctgtccatgtccactgtccccaggca
agatttcagtctctcccatttacaaaatgcacatattgctccacaatctt
ataaacctacaaccatcctttcaaaaacctgggacttagaatagaaacca
aaactacatccccccctcccccgagcaaaataatgtatagaaattctgtt
atctgagtgactgcgtatgaaaacatttaaggaccaaaataggagcatca
cagaactacagttgaaggtaacctcctgcttggtcttatgactagaataa
gaatagaaggcattctcccaggaaactttccatccagttctggaatgagg
atggatatattaaattgtctttatagttccgtgccatctgactctgaact
tgagcagccaaggaccatacttcttctggaagaacaatgggcgcacacag
cttctgtaattttcacactatctcctatgtatcttttgcttccttcacat
aaataaagtcttggctggtaaggatgcccagtagataaagacaacattgt
tcagatgcttaaaatgggccaagcaagaagaaccttagtgtgttttttaa
agcatatcattggataaaacaggtaattagctgtgataatggaaatataa
gcagggcctaattagcagagctcatcgttattatctcttagtgcaaacag
caaacattgggaattttgcgatcacacctgtgcatgtaatccttagttga
ttttggcccatagtctcagtggtagtcagaaacagttaaggctgtcacgt
tgatgcagtttttgtacttgtgcatttcagcatgccaggaaacaccggtg
tagctggagaagggaggctctgtgttagtcagagtcattgttacctgacc
tctgtgatccctaagttccctaatctcgtaggggcagccct
ttaagactcttccaaatgagtaccattcccagaacccacctcaggcagct
cacaatttcctgtaactcctgctccaggggaatctgaagccctcttccag
cctccttcagcgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_94795920_94797020
seq2: B6Ng01-057A04.b_48_1138 (reverse)

seq1  AGGGCTGCTCCTACGAGATTATGGGGACTTAGGGATCACAGATGTCAGGT  50
      |||||||| |||||||||||| ||| |||||||||||||||| |||||||
seq2  AGGGCTGCCCCTACGAGATTA-GGGAACTTAGGGATCACAGAGGTCAGGT  49

seq1  AACAATGACTCTGACTAACACAGAGCCCTCCCTCTCCCAGCTTACACTCG  100
      ||||||||||||||||||||||||| |||||||   ||||| |||||  |
seq2  AACAATGACTCTGACTAACACAGAG-CCTCCCTTCTCCAGC-TACACCGG  97

seq1  TGTTTTCCTTGGCATGCTGGAAATGGCACAAGTACAAAAACTGCATCAAC  150
      |||||  | ||||||||| ||||| |||||||||||||||||||||||||
seq2  TGTTT--CCTGGCATGCT-GAAAT-GCACAAGTACAAAAACTGCATCAAC  143

seq1  GTGACAGCCCTTAACTGTTTTCTGACTACCACTGAGACTATTGGGCCAAA  200
      ||||||| ||||||||| |||||||||||||||||||||| |||||||||
seq2  GTGACAG-CCTTAACTG-TTTCTGACTACCACTGAGACTA-TGGGCCAAA  190

seq1  ATCAACTAAGGATTACATGCACAGGTGTGATCGCAAAATTCCCAATGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAACTAAGGATTACATGCACAGGTGTGATCGCAAAATTCCCAATGTTT  240

seq1  GCTGTTTGCACTAAGAGATAATAACGATGAGCTCTGCTAATTAGGCCCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTTGCACTAAGAGATAATAACGATGAGCTCTGCTAATTAGGCCCTG  290

seq1  CTTATATTTCCATTATCACAGCTAATTACCTGTTTTATCCAATGATATGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATATTTCCATTATCACAGCTAATTACCTGTTTTATCCAATGATATGC  340

seq1  TTTAAAAAACACACTAAGGTTCTTCTTGCTTGGCCCATTTTAAGCATCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAAACACACTAAGGTTCTTCTTGCTTGGCCCATTTTAAGCATCTG  390

seq1  AACAATGTTGTCTTTATCTACTGGGCATCCTTACCAGCCAAGACTTTATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATGTTGTCTTTATCTACTGGGCATCCTTACCAGCCAAGACTTTATT  440

seq1  TATGTGAAGGAAGCAAAAGATACATAGGAGATAGTGTGAAAATTACAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGAAGGAAGCAAAAGATACATAGGAGATAGTGTGAAAATTACAGAA  490

seq1  GCTGTGTGCGCCCATTGTTCTTCCAGAAGAAGTATGGTCCTTGGCTGCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGTGCGCCCATTGTTCTTCCAGAAGAAGTATGGTCCTTGGCTGCTC  540

seq1  AAGTTCAGAGTCAGATGGCACGGAACTATAAAGACAATTTAATATATCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCAGAGTCAGATGGCACGGAACTATAAAGACAATTTAATATATCCA  590

seq1  TCCTCATTCCAGAACTGGATGGAAAGTTTCCTGGGAGAATGCCTTCTATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCATTCCAGAACTGGATGGAAAGTTTCCTGGGAGAATGCCTTCTATT  640

seq1  CTTATTCTAGTCATAAGACCAAGCAGGAGGTTACCTTCAACTGTAGTTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTCTAGTCATAAGACCAAGCAGGAGGTTACCTTCAACTGTAGTTCT  690

seq1  GTGATGCTCCTATTTTGGTCCTTAAATGTTTTCATACGCAGTCACTCAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGCTCCTATTTTGGTCCTTAAATGTTTTCATACGCAGTCACTCAGA  740

seq1  TAACAGAATTTCTATACATTATTTTGCTCGGGGGAGGGGGGGATGTAGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGAATTTCTATACATTATTTTGCTCGGGGGAGGGGGGGATGTAGTT  790

seq1  TTGGTTTCTATTCTAAGTCCCAGGTTTTTGAAAGGATGGTTGTAGGTTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTTCTATTCTAAGTCCCAGGTTTTTGAAAGGATGGTTGTAGGTTTA  840

seq1  TAAGATTGTGGAGCAATATGTGCATTTTGTAAATGGGAGAGACTGAAATC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATTGTGGAGCAATATGTGCATTTTGTAAATGGGAGAGACTGAAATC  890

seq1  TTGCCTGGGGACAGTGGACATGGACAGAGGTGCCACCTGTGCAGATAGTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTGGGGACAGTGGACATGGACAGAGGTGCCACCTGTGCAGATAGTA  940

seq1  AAGTGAGAGTTGAAATTTGAATGCTAGGCTTGTCCTGGTAACTCTCACTC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAGAGTTGAAATTTGAATGCTAGGCTTGTCCTGGTAACTCTCACTC  990

seq1  CCTTACAGCATGCTGAGAAGACTCAGTAGCAGCTCAGGATGATATCCAAT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTACAGCATGCTGAGAAGACTCAGTAGCAGCTCAGGATGATATCCAAT  1040

seq1  GACTGTCAGCTTCCCGTGACAACACAGACCCAGAGAAAATATTCAGAATT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTCAGCTTCCCGTGACAACACAGACCCAGAGAAAATATTCAGAATT  1090

seq1  C  1101
      |
seq2  C  1091