BAC Information

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BAC

Clone NameB6Ng01-057F21
Chromosome6 (Build37)
Map Location 18,835,452 - 18,835,968
singlet/doubletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-057F21.bB6Ng01-057F21.g
ACCDH879258DH879259
length9441,201
definitionDH879258|Mus musculus domesticus DNA, BAC clone: B6Ng01-057F21, 5' end.DH879259|Mus musculus domesticus DNA, BAC clone: B6Ng01-057F21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttgggtattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgatggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcgattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgttgaagatcaagt
aaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatgtt
ctgagatcttccttaatttctttcttcagagatttgaagtttttatcata
cagatctttcacttccttagttagagtcacgccaagatatttta

gaattcaaaaagaatcattgtaactatgcgcaaagaagacaaaaagtgag
ctgaatgaaataaggaagtcaatccaggatacaaaaatagaattcaatga
agaaatagaattgcccaagaacagccaaagggaaatgatgctggaaatga
aaaaaaaaaatcaaccaaatacaaacctcagcatggagccttccaacaga
atggatcgtgtgcaaaactgtctcagggctggaaagacaaaatagaggaa
ttggatcattcactaaaatgtcaatggataatttttaaaaatgaaatgaa
tatgagagatcattgggaacaacaaaaatacctaacctttcaattatggg
aagaaaagaagaatactatagcaaatgcatgcatattctcaatagaagat
gatttcctaaacctagagaaagagtaacaagaggcccacagaacctaagt
aaatatacaggacaagaaaagaaactccttatgacatattgtagttaaaa
cattaaaagtataatatacaaagggatttgaaagatagaagaaagaaatg
tcaactcactttaaaaaggcaagtctaatcagaataacatttgattgttt
ggcagacacttttaaagctagaggggcctggaaacacatatttcaagttc
tgaaagacaagaactgccaacccagaatgtcatacacagtacagatagct
acttaaaagaaaaataaaagcttcccatgattaaaaaaaaaagattaaag
gaacttatgaccactaagccatctctacagaggatatttgttgttggttt
gagatggccccataggctcatatatgtgactatatggaccctaactggtc
aagatctttggaaaggattagatgctgtggccttattggaggagatgttc
tagtaagtataggctctgaggtttaaaatccagccatttccactaagctc
tgcatgcctcctactacaaattaagattgagctttcagctactgctatag
tgccattgtaataaaatatgtatttcaaataatagctgcaaataatttta
aagttcaagaattgaaattactgatagatagattatggcattaattattg
gttgtttgaatttatcggagttctgcttaattaaaataacgatcgccacc
atttaattaacttggattgaaggagagagactgcctatactatcttgtaa
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835452_18835968
seq2: B6Ng01-057F21.b_49_566 (reverse)

seq1  ACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATC  50
      ||||||||||||||||| ||||||||||| ||||||||||||||||||||
seq2  ACCCACACACCTATGGTTACTTGATCTTCAACAAGGGAGCTAAAACCATC  50

seq1  CAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTT  100

seq1  GTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCTCCATGTACTA  150
      |||||| |||||||||||| |||||||||||||||||||||| |||||||
seq2  GTTATCGTGTAGAAGAATGCGAATCGATCCATACTTATCTCCTTGTACTA  150

seq1  AGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTG  200

seq1  AAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCAGAGG  250
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGG  250

seq1  GGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTGAGGTAGAGAA  299
      |||||| ||||||||||||||||||||||| |||||||| || | |||||
seq2  GGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAA  300

seq1  TCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGAC  350

seq1  ACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTAC  399
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTAC  400

seq1  CTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCA  449
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CTATCCTAAATCAGATAGGGGACTAATACCCAACATATATAAAGAACTCA  450

seq1  AGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAAATGGGGCTCA  499
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCA  500

seq1  GAACTGAACAAAGAATTC  517
      ||||||||||||||||||
seq2  GAACTGAACAAAGAATTC  518


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