BAC Information

Click to search

BAC

Clone NameB6Ng01-057O15
Chromosome6 (Build37)
Map Location 93,350,217 - 93,540,891
singlet/doubletdoublet
Overlap genenone
Upstream genePrickle2, LOC545866, A730049H05Rik, LOC384461, LOC100043253
Downstream geneLOC665831, Magi1, LOC100043262, LOC665856, Slc25a26
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-057O15.bB6Ng01-057O15.g
ACCDH879634DH879635
length902988
definitionDH879634|Mus musculus domesticus DNA, BAC clone: B6Ng01-057O15, 5' end.DH879635|Mus musculus domesticus DNA, BAC clone: B6Ng01-057O15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(93,350,217 - 93,351,115)(93,539,905 - 93,540,891)
sequence
gaattctcttagactacaaagtcatattcttttaaaggaaatctaagtat
catcagccatttattttgcaaggcttcctttgtttataccaccctgggtc
aaactcacagatcagagtctaacagcatataatatcagtacgcaacaaac
aaacaaaatcttccttggataaagtcaggaagagagaaagttatttatca
caaagcactgtacctttcagttttgcatggaggaacacaagataaagaga
agaacgaaggaagcagatgcttttacctgagaaggaaggcaaggtttcaa
ataattcagatttttggagcatcccaaactgcacccacacacttcctcca
catgccccagagagcctggtgctcatgtaggcctgccaggtccacactac
caaatggttatttggaaagttcctttttaattagtttttttaaaatttta
tttatatacatgtttagcctgtgtgtatatttttgtgtcaagtatatgac
ttcagaggccacaaaagggtgtcagataccctggaactggagttagagcc
ttcacgaatgctctgaaaatctgctgagccaaccctccagcctctggaag
tcccttttggatatgatcacattgttttctcttctgcttcattaccaggc
aggtttataccaccactattgatcagaccctgagatgtcagatcctaaat
tcttctctgtttttactaggattccctgaaaaatcttgttttcaaaggtc
acacctcaaactctgctaattttcatggccagccagagagtagtaccact
cagaaaaatagtgaaagcccaacataaaaaagaaaacagtctagccactc
cacagacactccaaggcttctctttaggcacatgcaaaagggtgttgttg
gt
gaattccattgtttgcttctcctccttgaattcaaggatggaatactgtt
atgtttttgcttgtaaggggccccttaagaacttaaacgctaaagacttg
gcctggagctgacaactaaggagctggtgaaacctttgagaggtgggaac
ttttagaaggaagtgaggccccttctctgggtttctgtaggataagctgt
tttgttccatgcaccacagtggtctgccttaccataggcctcaaaactat
tgaaccaactggccatggcctgaaaccttttaagccatgggcttgaataa
gaatttgtctttaagttgattttgtcacaacaaccagaaattaattgaga
tcttcagccccccccccaagaatttgctttgaacatgtgttctagggcag
ggcttgggagtaatgatggaagtgtctgcttgcctggttgttcaccgaca
tcctgaagagctccatctatctcaccaactcaagtacattgctacaaagt
accatcacttaccctcaatccttcccttgaacagaaaagaagtgttgggg
atttcaaaaggcattgcccttaaactttttgaatagagttaaaagacaca
tctgtgtttgagggaggcaaacattttgcattaaacaaccacaaaagtct
gtggaagaagccctcagagcacccctgaagaaaacaaaagcaactgtaca
gaatggccctgagtaggagggaggaaactggagccaatggctagagttta
tatttgcataagagctcttgctaggtgcatgttcaactgagtattttaga
atatgtcagtggtggggatgtatcgcacatcagtcagagctcaaagtgtt
cgctcagtgtttctttctatggttgtatgaacatgtgcttaaacacttgg
tcaaacaaagtttatagctggcttcgtcaggagcatgactggctgggata
ttatactaagaaaggggggggctaaggaagaagggctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_93350217_93351115
seq2: B6Ng01-057O15.b_35_936

seq1  GAATTCTCTTAGACTACAAAGTCATATTCTCTT-TAGGAAATCTAAGTAT  49
      |||||||||||||||||||||||||||||| ||  |||||||||||||||
seq2  GAATTCTCTTAGACTACAAAGTCATATTCTTTTAAAGGAAATCTAAGTAT  50

seq1  CATCAGCCATTTATTTTGCAAGGCTTCCTTTGTTTATACCACCCTGGGTC  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGCCATTTATTTTGCAAGGCTTCCTTTGTTTATACCACCCTGGGTC  100

seq1  AAACTCACAGATCAGAGTCTAACAGCATATAATATCAGTACGCAACAAAC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCACAGATCAGAGTCTAACAGCATATAATATCAGTACGCAACAAAC  150

seq1  AAACAAAATCTTCCTTGGATAAAGTCAGGAAGAGAGAAAGTTATTTATCA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAATCTTCCTTGGATAAAGTCAGGAAGAGAGAAAGTTATTTATCA  200

seq1  CAAAGCACTGTACCTTTCAGTTTTGCATGGAGGAACACAAGATAAAGAGA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCACTGTACCTTTCAGTTTTGCATGGAGGAACACAAGATAAAGAGA  250

seq1  AGAACGAAGGAAGCAGATGCTTTTACCTGAGAAGGAAGGCAAGGTTTCAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACGAAGGAAGCAGATGCTTTTACCTGAGAAGGAAGGCAAGGTTTCAA  300

seq1  ATAATTCAGATTTTTGGAGCATCCCAAACTGCACCCACACACTTCCTCCA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTCAGATTTTTGGAGCATCCCAAACTGCACCCACACACTTCCTCCA  350

seq1  CATGCCCCAGAGAGCCTGGTGCTCATGTAGGCCTGCCAGGTCCACACTAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCCCAGAGAGCCTGGTGCTCATGTAGGCCTGCCAGGTCCACACTAC  400

seq1  CAAATGGTTATTTGGAAAGTTCCTTTTTAATTAGTTTTTTTAAAATTTTA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGGTTATTTGGAAAGTTCCTTTTTAATTAGTTTTTTTAAAATTTTA  450

seq1  TTTATATACATGTTTAGCCTGTGTGTATATTTTTGTGTCAAGTATATGAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATATACATGTTTAGCCTGTGTGTATATTTTTGTGTCAAGTATATGAC  500

seq1  TTCAGAGGCCACAAAAGGGTGTCAGATACCCTGGAACTGGAGTTAGAGCC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAGGCCACAAAAGGGTGTCAGATACCCTGGAACTGGAGTTAGAGCC  550

seq1  TTCACGAATGCTCTGAAAATCTGCTGAGCCAACCCTCCAGCCTCTGGAAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACGAATGCTCTGAAAATCTGCTGAGCCAACCCTCCAGCCTCTGGAAG  600

seq1  TCCCTTTTGGATATGATCACATTGTTTTCTCTTCTGCTTCATTACCAGGC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTTTGGATATGATCACATTGTTTTCTCTTCTGCTTCATTACCAGGC  650

seq1  AGGTTTATACCACCACTATTGATCAGACCCTGAGATGTCAGATCCTAAAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTATACCACCACTATTGATCAGACCCTGAGATGTCAGATCCTAAAT  700

seq1  TCTTCTCTGTTTTTACTAGGATTCCCTG-AAAATCTTG-TTTCAAAGGTC  747
      |||||||||||||||||||||||||||| ||||||||| |||||||||||
seq2  TCTTCTCTGTTTTTACTAGGATTCCCTGAAAAATCTTGTTTTCAAAGGTC  750

seq1  ACACCTCAGAACTCTGCTAA-TTTCATGGCCAGCCAGAGAGTAGTACCAC  796
      |||||||| ||||||||||| |||||||||||||||||||||||||||||
seq2  ACACCTCA-AACTCTGCTAATTTTCATGGCCAGCCAGAGAGTAGTACCAC  799

seq1  TCAGAAAAATAGTGAAAGCCCAACAT-AAAAAGAAAACAGCCTAGCCACT  845
      |||||||||||||||||||||||||| ||||||||||||| |||||||||
seq2  TCAGAAAAATAGTGAAAGCCCAACATAAAAAAGAAAACAGTCTAGCCACT  849

seq1  CCACAGACACTCCAAGGCTTCTCTTTAGGCACATGCCAAAGGGGTGTTGT  895
      ||||||||||||||||||||||||||||||||||| |||| |||||||||
seq2  CCACAGACACTCCAAGGCTTCTCTTTAGGCACATG-CAAAAGGGTGTTGT  898

seq1  TGTT  899
      || |
seq2  TGGT  902

seq1: chr6_93539905_93540891
seq2: B6Ng01-057O15.g_71_1058 (reverse)

seq1  AAGCCCTTC-TCCTTAG-CCCCCCCTTTCCTAGTATAATATCCCAG-CAG  47
      ||||||||| ||||||| ||||||||||| |||||||||||||||| |||
seq2  AAGCCCTTCTTCCTTAGCCCCCCCCTTTCTTAGTATAATATCCCAGCCAG  50

seq1  TCATTGCTCCTGACTGAAG-CAGCTATAAACTTTGTTTAGACAAGTGTTT  96
      ||| |||||||||| |||| ||||||||||||||||||   |||||||||
seq2  TCA-TGCTCCTGAC-GAAGCCAGCTATAAACTTTGTTTGACCAAGTGTTT  98

seq1  GAAGCACATTGTTCATACAACAATAGAAAAGAGACACTGAGCGAACACTC  146
       ||||||| |||||||||||| |||| ||||| |||||||||||||||| 
seq2  -AAGCACA-TGTTCATACAACCATAG-AAAGAAACACTGAGCGAACACTT  145

seq1  TGAGCTCTGACTGATGTGCGATACATCCCAA--GGTGACATATTATAAAA  194
      ||||||||||||||||||||||||||||| |    ||||||||| |||||
seq2  TGAGCTCTGACTGATGTGCGATACATCCCCACCACTGACATATTCTAAAA  195

seq1  TACTCAGTTGAAACAATGCACCTAGCAAGAGCTCTTATGCAAATATAAAC  244
      ||||||||||||   |||||||||||||||||||||||||||||||||||
seq2  TACTCAGTTGAA--CATGCACCTAGCAAGAGCTCTTATGCAAATATAAAC  243

seq1  TCTAGCCATTGGCTCCAGTTTCCTCCCTCCTACTCAGGGCCATTCTGTAC  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGCCATTGGCTCCAGTTTCCTCCCTCCTACTCAGGGCCATTCTGTAC  293

seq1  AGTTGCTTTTGTTTTCTTCA-GGGTGCTCTGAGGGCTTCTTCCACAGACT  343
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AGTTGCTTTTGTTTTCTTCAGGGGTGCTCTGAGGGCTTCTTCCACAGACT  343

seq1  TTTGTGGTTGTTTAATGC-AAATGTTTGCCTCCCTCAAACACAGATGTGT  392
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TTTGTGGTTGTTTAATGCAAAATGTTTGCCTCCCTCAAACACAGATGTGT  393

seq1  CTTTTAACTCTATTCAAAAAGTTTAAGGGCAATGCCTTTTGAAATCCCCA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAACTCTATTCAAAAAGTTTAAGGGCAATGCCTTTTGAAATCCCCA  443

seq1  ACACTTCTTTTCTGTTCAAGGGAAGGATTGAGGGTAAGTGATGGTACTTT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTCTTTTCTGTTCAAGGGAAGGATTGAGGGTAAGTGATGGTACTTT  493

seq1  GTAGCAATGTACTTGAGTTGGTGAGATAGATGGAGCTCTTCAGGATGTCG  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCAATGTACTTGAGTTGGTGAGATAGATGGAGCTCTTCAGGATGTCG  543

seq1  GTGAACAACCAGGCAAGCAGACACTTCCATCATTACTCCCAAGCCCTGCC  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAACAACCAGGCAAGCAGACACTTCCATCATTACTCCCAAGCCCTGCC  593

seq1  CTAGAACACATGTTCAAAGCAAATTCTTGGGGGGGGGGCTGAAGATCTCA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAACACATGTTCAAAGCAAATTCTTGGGGGGGGGGCTGAAGATCTCA  643

seq1  ATTAATTTCTGGTTGTTGTGACAAAATCAACTTAAAGACAAATTCTTATT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTTCTGGTTGTTGTGACAAAATCAACTTAAAGACAAATTCTTATT  693

seq1  CAAGCCCATGGCTTAAAAGGTTTCAGGCCATGGCCAGTTGGTTCAATAGT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCCATGGCTTAAAAGGTTTCAGGCCATGGCCAGTTGGTTCAATAGT  743

seq1  TTTGAGGCCTATGGTAAGGCAGACCACTGTGGTGCATGGAACAAAACAGC  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGGCCTATGGTAAGGCAGACCACTGTGGTGCATGGAACAAAACAGC  793

seq1  TTATCCTACAGAAACCCAGAGAAGGGGCCTCACTTCCTTCTAAAAGTTCC  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCCTACAGAAACCCAGAGAAGGGGCCTCACTTCCTTCTAAAAGTTCC  843

seq1  CACCTCTCAAAGGTTTCACCAGCTCCTTAGTTGTCAGCTCCAGGCCAAGT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCTCAAAGGTTTCACCAGCTCCTTAGTTGTCAGCTCCAGGCCAAGT  893

seq1  CTTTAGCGTTTAAGTTCTTAAGGGGCCCCTTACAAGCAAAAACATAACAG  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGCGTTTAAGTTCTTAAGGGGCCCCTTACAAGCAAAAACATAACAG  943

seq1  TATTCCATCCTTGAATTCAAGGAGGAGAAGCAAACAATGGAATTC  987
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCATCCTTGAATTCAAGGAGGAGAAGCAAACAATGGAATTC  988