BAC Information

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BAC

Clone NameB6Ng01-058H03
Chromosome6 (Build37)
Map Location 18,835,442 - 18,835,968
singlet/doubletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-058H03.bB6Ng01-058H03.g
ACCDH880020DH880021
length9341,228
definitionDH880020|Mus musculus domesticus DNA, BAC clone: B6Ng01-058H03, 5' end.DH880021|Mus musculus domesticus DNA, BAC clone: B6Ng01-058H03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattgtttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttggctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tccacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctcggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
aatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttggtcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcaggacttgaagtttttatcatac
agatctttcacttccttcgttagagtcacgccga

gaattctccttctaatctaaaaagtgttctgtctatgaacatctcctcag
ctcagttcctctcagctcagttcttctcacctctgttcctctcactccag
tccctcagttctgactcttctctgtcctcagcccttaaatatcatgcaga
atacatgatcacatgttaaacagttcatcaaaagttcacagagaaaatca
aataataaattgaaatagaagtttacagcagagaatatttacatgcatat
caattaggagtgattatctagctaaacatccatcacttgtctcatctcca
caggttcactgaaggtttaaaaccataactaagttataagtgaagtttgt
tatagataaacccagtcaatattttattttctatcctagcacctataata
aatcattagttcccttttaatgacatttggttaattgttttacaacctct
tggaatgtgctctgagtaggagaaagtctggttaccatctaagagcaatt
aactggtgacacttgagaaactggcagagttctcattgcaactttgatta
tcagaaaaggacctaatagcagtcccattatataaaagcttaataatcac
aggtataattttaggaattcttataggatgatcattaagacttaagtcat
atatttgtctatatagcatcactacaagatagtacaaaatcttcgtagat
gtgtagagatctgctccaaaggggtgtgctactacttagtgatagttata
tatgtttaataataacaggaaaagcataatagaatacatctttcctaaaa
tgaatccctcacagccttgttaatgacggctcacctgtcacagatatagt
aattggggccaggccacttcagatgatcctgctagtcattagcttgtcca
attatggctcctgacacaccatgatttggaatttgtgatgttgacattaa
gtcagtacagtaaagtgaagctccatgtactaaataacactgtaagatca
ctgactgtggtctcgtcaattcatttaggtagataaatagattatttgat
aactatataaactatcccaactaacagttattatttacattttatagaga
cagctgcacttgctagttacggccattttgactcttctcagccgaagcat
tgaacgaactctgtactcttaaggaagtcgtcaattctgacctggatcga
gtgtaactctgaggtatgacgactgata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835442_18835968
seq2: B6Ng01-058H03.b_46_573 (reverse)

seq1  CCAGAGATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50

seq1  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  100
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  100

seq1  ACAACTGGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCT  150
      |||||||||||||||| |||||||||||| ||||||||||||||||||||
seq2  ACAACTGGTTGTTATCATGTAGAAGAATGCGAATCGATCCATACTTATCT  150

seq1  CCATGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  200
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  200

seq1  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250

seq1  TGGGCAGAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTG  299
      |||||| ||||||||| ||||||||||||||||||||||| |||||||| 
seq2  TGGGCACAGGGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTA  300

seq1  AGGTAGAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  349
      || | |||||| ||||||||||||||||||||||||||||||||||||||
seq2  AGATCGAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  350

seq1  GGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAA  399
      |||||||||||| ||| ||||||||||||||||||||||||| |||||||
seq2  GGCAAAAGACACTGTCTATAAGACAAAAAGACCACCAACAGACTGGGAAA  400

seq1  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  450

seq1  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAA  499
      ||||||||||||||||||||| |||||||||||||||||||| |||| ||
seq2  AAAGAACTCAAGAAGGTGGACCTCAGAAAATCAAATAACCCCCTTAAAAA  500

seq1  ATGGGGCTCAGAACTGAACAAAGAATTC  527
      |||||||||||||||||||||| |||||
seq2  ATGGGGCTCAGAACTGAACAAACAATTC  528


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