BAC Information

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BAC

Clone NameB6Ng01-060C10
Chromosome6 (Build37)
Map Location 130,248,473 - 130,249,210
singlet/doubletsinglet
Overlap geneLOC100038898, Klra12, Klra13
Upstream gene4922502D21Rik, Clec12a, 4933425B16Rik, Clec1b, Clec9a, Clec1a, Clec7a, Olr1, D630042F21Rik, Gabarapl1, Klre1, Klrd1, Klrk1, Klrc3, Klrc2, Klrc1, LOC640755, Klri1, Klri2, Gm156, Klra17, Klra5, LOC667764, Klra6, LOC100038893, LOC100038894, LOC100038895, Klra4, LOC667769, LOC100038897, Klra8, EG654449, Klra9, Klra7, Klra10
Downstream geneKlra3, Klra1, LOC100038902, LOC100038903, LOC625436, EG625473, LOC640779, LOC667793, EG667798, EG625558, LOC625566, EG636947, LOC625628, EG625648, LOC667830, EG434094, Klra2, LOC434095, 2010012C16Rik, Styk1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-060C10.g
ACCDH881214
length739
definitionDH881214|Mus musculus domesticus DNA, BAC clone: B6Ng01-060C10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacatttaactaatttcatagagtattagaagttctttaatgatc
tataaatttttatgggccttgagcaggaagattatgtgttcaaggatagg
ctaggtttgtagagagtctaggtctaagaaacatagtcacaaataatgcc
ataaacacagtatctcaggacacctggaggttttattttaaataactcat
tgaactgacagagttttgatttaaatgtgctttagtaggaatccacttta
gaaaatgaacacagtgaaactgagcagtggaaggataggacagcagagaa
tgacacgggaatgctgggaaatttcccttcttgttctctctaatcagata
gaaattttattgtaaggtctgttgtttccattacagaagttccttcagaa
cctggctccttcaggcatttcctggattggattttcatatgacaataaga
gaaaagattgggtatggattgacaatggcccatctaaactgtgagtttct
gagcctttcagactctaacactggtgtgtgaattgggaggattgtgtgca
aagccttttctctcatttcacatggctttcctcattttcaatggagctca
gggctaaggacaagtagcataatacagagtctgaacaagcattaccgtgg
ggaagatgtatagtctaggagataaccaaaagagacttaatactgcatac
tttcaggtctttgtccttctaagttgcaaaggcccctag
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_130248473_130249210
seq2: B6Ng01-060C10.g_65_803 (reverse)

seq1  CTAGGGGCCTTTGCAACTTAGAA-GACAAAGACCTGAGATGTATGCAGTA  49
      ||||||||||||||||||||||| ||||||||||||| | ||||||||||
seq2  CTAGGGGCCTTTGCAACTTAGAAGGACAAAGACCTGA-AAGTATGCAGTA  49

seq1  TTAAGTCTCTTTTGGTTATCTCCTAGACTATACATCTT-CCCACGGTAAT  98
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TTAAGTCTCTTTTGGTTATCTCCTAGACTATACATCTTCCCCACGGTAAT  99

seq1  GCTTGTTCAGACTCTGTCTTATGCTACTTGTCCTTAGCCCTGAGCTCCAT  148
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GCTTGTTCAGACTCTGTATTATGCTACTTGTCCTTAGCCCTGAGCTCCAT  149

seq1  TGAAAATGAGGAAAGCCATGTGAAATGAGAGAAAAGGCTTTGCACACAAT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAATGAGGAAAGCCATGTGAAATGAGAGAAAAGGCTTTGCACACAAT  199

seq1  CCTCCCAATTCACACACCAGTGTTAGAGTCTGAAAGGCTCAGAAACTCAC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCAATTCACACACCAGTGTTAGAGTCTGAAAGGCTCAGAAACTCAC  249

seq1  AGTTTAGATGGGCCATTGTCAATCCATACCCAATCTTTTCTCTTATTGTC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTAGATGGGCCATTGTCAATCCATACCCAATCTTTTCTCTTATTGTC  299

seq1  ATATGAAAATCCAATCCAGGAAATGCCTGAAGGAGCCAGGTTCTGAAGGA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAAAATCCAATCCAGGAAATGCCTGAAGGAGCCAGGTTCTGAAGGA  349

seq1  ACTTCTGTAATGGAAACAACAGACCTTACAATAAAATTTCTATCTGATTA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTGTAATGGAAACAACAGACCTTACAATAAAATTTCTATCTGATTA  399

seq1  GAGAGAACAAGAAGGGAAATTTCCCAGCATTCCCGTGTCATTCTCTGCTG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAACAAGAAGGGAAATTTCCCAGCATTCCCGTGTCATTCTCTGCTG  449

seq1  TCCTATCCTTCCACTGCTCAGTTTCACTGTGTTCATTTTCTAAAGTGGAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATCCTTCCACTGCTCAGTTTCACTGTGTTCATTTTCTAAAGTGGAT  499

seq1  TCCTACTAAAGCACATTTAAATCAAAACTCTGTCAGTTCAATGAGTTATT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTACTAAAGCACATTTAAATCAAAACTCTGTCAGTTCAATGAGTTATT  549

seq1  TAAAATAAAACCTCCAGGTGTCCTGAGATACTGTGTTTATGGCATTATTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAAAACCTCCAGGTGTCCTGAGATACTGTGTTTATGGCATTATTT  599

seq1  GTGACTATGTTTCTTAGACCTAGACTCTCTACAAACCTAGCCTATCCTTG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTATGTTTCTTAGACCTAGACTCTCTACAAACCTAGCCTATCCTTG  649

seq1  AACACATAATCTTCCTGCTCAAGGCCCATAAAAATTTATAGATCATTAAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACATAATCTTCCTGCTCAAGGCCCATAAAAATTTATAGATCATTAAA  699

seq1  GAACTTCTAATACTCTATGAAATTAGTTAAATGTGAATTC  738
      ||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTCTAATACTCTATGAAATTAGTTAAATGTGAATTC  739