BAC Information

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BAC

Clone NameB6Ng01-060C22
Chromosome6 (Build37)
Map Location 134,091,016 - 134,241,938
singlet/doubletdoublet
Overlap geneEtv6
Upstream gene5530400C23Rik, EG545884, EG626372, LOC100043649, LOC100043653, EG545886, LOC622962, Kap, LOC100043655, LOC100043656, LOC668063
Downstream geneLOC100043660, Bcl2l14, Lrp6, Mansc1, Loh12cr1, LOC100043884, Dusp16, Crebl2, Gpr19, Cdkn1b, 1190002F15Rik, Apold1, Ddx47, Gprc5a, Gprc5d, LOC100043668, Hebp1, 8430419L09Rik, Gsg1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-060C22.bB6Ng01-060C22.g
ACCDH881233DH881234
length9611,068
definitionDH881233|Mus musculus domesticus DNA, BAC clone: B6Ng01-060C22, 5' end.DH881234|Mus musculus domesticus DNA, BAC clone: B6Ng01-060C22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(134,241,326 - 134,241,938)(134,091,016 - 134,092,090)
sequence
gaattctctcaccatccaggaacccctacatcatgggccttaaaactgat
tgtagaaggctcccttggagacctcagttgcttctccctttattaatggt
gttatcttcttcatggctctggggtcatgagagcaggagaactggccctg
cctctcacaggtggcagctcttgggttagtatacaaagaaacacacacac
acacacacacacatacacacacacacacacacacacacacacacacacac
acacacacacacacacacacaaattaactctggagcaactggtatgttca
catgcaaattcaaaccggaacaaaaagtgcatcatcacaaacttttacca
ttaacaaaaattaagccaattgaacgatagacttacactatgacactctc
gtaagacaagggggagtccagatgacctgggagtttaaaccaaaggcgca
aaccatggaggaaggatgggtgacctggacctcactaaagtaaaatcctt
ccactctgtgaaaggcattataaaaataataagacaaaacctccgatggc
agaaaatgtttgcaaaggacgcagcagataagaactgttatccaagacat
tcaggagcttataaaactcgacagtaaggaaacaaaaacgtgaccataaa
caagcagtgacttggacatctcatcagagaagacagacaattaacaggca
caatggtgctcaatgccacacactatcaagagaaatgcacatcaaaacag
tatcagaaccaagtcagaatgacagcatccaaggttggtgacattgggag
ccagaggcttgttccttcttggcttgtacaactactaagtggtacagtca
ttttggaaaatggcgtgctgctctcacaaaatatctaaacataccctaag
catgtgacccttagttataactccttagtatttacccaaagaaaggaaac
agccatacaaa
gaattcagtggtcaccaactctgaggttgggccatacacatcccagctga
gtttccaagcttaaaagaataaaatgaatactcgggcaagggaattgggt
tgctgctgttttaatccaggattccagacaattcccagtagaatgcgcat
ggaaagtccggggaagagtctgggaggcaggacagcagcaggacatttat
ggcattacaaggatgagcacattctcagaggctcgttttaaaagaagagc
cagcctggctcccgctcactgctctccagctgtagcttctcgatcttacc
tttcttttcttctgacatccttaaatgaagataagatttggaaatcgggg
gagggcaggagtctcatagccaagattctcacgcagtcttaccactgtgt
tagacaaacacaagtctactaaagacccccacctggcaaattagcacaga
ggctttgcagacgtgataaaggggaagtgataaatgaaacaagtgctaag
taacgatcatgaggtgcaaaaaggacatgcaggataatacaggcctaggt
gcccagagctgcagatgatgctgttcagcagtcctactgacctccctgtt
catgggaggacagatacgttatggaaaggataggaagggcatgtttctcc
tcctcttctccttctcccctcttctgcaaagcattctgaatcatttataa
gcctaagggtagaagggctgaggtatagtcacagcagtccatgaagaaca
aaggctcccttctttatactgagcatcagtctctgtgtccctgtgagaac
acctcagcaccccaggggttcagggttgggctcactggtgatccccacca
ttgcatggaaagaggaagtctttttctctgtgctcttggggactggggga
cagtatgggacttacaatgagcctcacagcatgctacactgctgtcctgt
agatttgcatccccgtgaccagatgtctgagcaaacagacttaaaggaag
agctttattttggtccatggtctgtactctgaatctgtggccactgactc
cttcttccggtgtgtggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_134241326_134241938
seq2: B6Ng01-060C22.b_46_658 (reverse)

seq1  TATAAGCTCCTGAATGTCTTGGATAACAGTTCTTATCTGCTGCGTCCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGCTCCTGAATGTCTTGGATAACAGTTCTTATCTGCTGCGTCCTTT  50

seq1  GCAAACATTTTCTGCCATCGGAGGTTTTGTCTTATTATTTTTATAATGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACATTTTCTGCCATCGGAGGTTTTGTCTTATTATTTTTATAATGCC  100

seq1  TTTCACAGAGTGGAAGGATTTTACTTTAGTGAGGTCCAGGTCACCCATCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACAGAGTGGAAGGATTTTACTTTAGTGAGGTCCAGGTCACCCATCC  150

seq1  TTCCTCCATGGTTTGCGCCTTTGGTTTAAACTCCCAGGTCATCTGGACTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCCATGGTTTGCGCCTTTGGTTTAAACTCCCAGGTCATCTGGACTC  200

seq1  CCCCTTGTCTTACGAGAGTGTCATAGTGTAAGTCTATCGTTCAATTGGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTGTCTTACGAGAGTGTCATAGTGTAAGTCTATCGTTCAATTGGCT  250

seq1  TAATTTTTGTTAATGGTAAAAGTTTGTGATGATGCACTTTTTGTTCCGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTTGTTAATGGTAAAAGTTTGTGATGATGCACTTTTTGTTCCGGT  300

seq1  TTGAATTTGCATGTGAACATACCAGTTGCTCCAGAGTTAATTTGTGTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATTTGCATGTGAACATACCAGTTGCTCCAGAGTTAATTTGTGTGTG  350

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTA  400

seq1  TGTGTGTGTGTGTGTGTGTGTGTTTCTTTGTATACTAACCCAAGAGCTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTTTCTTTGTATACTAACCCAAGAGCTGC  450

seq1  CACCTGTGAGAGGCAGGGCCAGTTCTCCTGCTCTCATGACCCCAGAGCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGTGAGAGGCAGGGCCAGTTCTCCTGCTCTCATGACCCCAGAGCCA  500

seq1  TGAAGAAGATAACACCATTAATAAAGGGAGAAGCAACTGAGGTCTCCAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAAGATAACACCATTAATAAAGGGAGAAGCAACTGAGGTCTCCAAG  550

seq1  GGAGCCTTCTACAATCAGTTTTAAGGCCCATGATGTAGGGGTTCCTGGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCCTTCTACAATCAGTTTTAAGGCCCATGATGTAGGGGTTCCTGGAT  600

seq1  GGTGAGAGAATTC  613
      |||||||||||||
seq2  GGTGAGAGAATTC  613

seq1: chr6_134091016_134092090
seq2: B6Ng01-060C22.g_66_1133

seq1  GAATTCAGTGGTCACCAACTCTGAGGTTGGGCCATACACATCCCAGCTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGGTCACCAACTCTGAGGTTGGGCCATACACATCCCAGCTGA  50

seq1  GTTTCCAAGCTTAAAAGAATAAAATGAATACTCGGGCAAGGGAATTGGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCAAGCTTAAAAGAATAAAATGAATACTCGGGCAAGGGAATTGGGT  100

seq1  TGCTGCTGTTTTAATCCAGGATTCCAGACAATTCCCAGTAGAATGCGCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCTGTTTTAATCCAGGATTCCAGACAATTCCCAGTAGAATGCGCAT  150

seq1  GGAAAGTCCGGGGAAGAGTCTGGGAGGCAGGACAGCAGCAGGACATTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGTCCGGGGAAGAGTCTGGGAGGCAGGACAGCAGCAGGACATTTAT  200

seq1  GGCATTACAAGGATGAGCACATTCTCAGAGGCTCGTTTTAAAAGAAGAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTACAAGGATGAGCACATTCTCAGAGGCTCGTTTTAAAAGAAGAGC  250

seq1  CAGCCTGGCTCCCGCTCACTGCTCTCCAGCTGTAGCTTCTCGATCTTACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTGGCTCCCGCTCACTGCTCTCCAGCTGTAGCTTCTCGATCTTACC  300

seq1  TTTCTTTTCTTCTGACATCCTTAAATGAAGATAAGATTTGGAAATCGGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTCTTCTGACATCCTTAAATGAAGATAAGATTTGGAAATCGGGG  350

seq1  GAGGGCAGGAGTCTCATAGCCAAGATTCTCACGCAGTCTTACCACTGTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGCAGGAGTCTCATAGCCAAGATTCTCACGCAGTCTTACCACTGTGT  400

seq1  TAGACAAACACAAGTCTACTAAAGACCCCCACCTGGCAAATTAGCACAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACAAACACAAGTCTACTAAAGACCCCCACCTGGCAAATTAGCACAGA  450

seq1  GGCTTTGCAGACGTGATAAAGGGGAAGTGATAAATGAAACAAGTGCTAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTGCAGACGTGATAAAGGGGAAGTGATAAATGAAACAAGTGCTAAG  500

seq1  TAACGATCATGAGGTGCAAAAAGGACATGCAGGATAATACAGGCCTAGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACGATCATGAGGTGCAAAAAGGACATGCAGGATAATACAGGCCTAGGT  550

seq1  GCCCAGAGCTGCAGATGATGCTGTTCAGCAGTCCTACTGACCTCCCTGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGAGCTGCAGATGATGCTGTTCAGCAGTCCTACTGACCTCCCTGTT  600

seq1  CATGGGAGGACAGATACGTTATGGAAAGGATAGGAAGGGCATGTTTCTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGAGGACAGATACGTTATGGAAAGGATAGGAAGGGCATGTTTCTCC  650

seq1  TCCTCTTCTCCTTCTCCCCTCTTCTGCAAAGCATTCTGAATCATTTATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTTCTCCTTCTCCCCTCTTCTGCAAAGCATTCTGAATCATTTATAA  700

seq1  GCCTAAGGGTAGAAGGGCTGAGGTATAGTCACAGCAGTCCATGAAGAACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAAGGGTAGAAGGGCTGAGGTATAGTCACAGCAGTCCATGAAGAACA  750

seq1  AAGGCTCCCTTCTTTATACTGAGCATCAGTCTCTGTGTCCCTGTGAGAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTCCCTTCTTTATACTGAGCATCAGTCTCTGTGTCCCTGTGAGAAC  800

seq1  ACCTCAGCACCCCAGGGGTTCAGGGTTGGGCTCACTGGTGATCCCCACCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCAGCACCCCAGGGGTTCAGGGTTGGGCTCACTGGTGATCCCCACCA  850

seq1  TTGCATGGAAAGAGGAAGTC-TTTTCCCTGTGCTCTTGGGGACTGGGGGA  899
      |||||||||||||||||||| ||||| |||||||||||||||||||||||
seq2  TTGCATGGAAAGAGGAAGTCTTTTTCTCTGTGCTCTTGGGGACTGGGGGA  900

seq1  CAGTATGGGACTTACAAATGAGGCCTCACAGCATGCTACCACTGCTGTCC  949
      ||||||||||||||| ||||| |||||||||||||||| |||||||||||
seq2  CAGTATGGGACTTAC-AATGA-GCCTCACAGCATGCTA-CACTGCTGTCC  947

seq1  TGTTAGATTTGCATCCCCGTGACCAGATGTCTGAGCAAACAGACTTAAAA  999
      || ||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TG-TAGATTTGCATCCCCGTGACCAGATGTCTGAGCAAACAGACTT-AAA  995

seq1  GGAAGAGCTTTATTTTGGTCCATGGTTCTGTACTCTGAATCTGTGGCCAC  1049
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GGAAGAGCTTTATTTTGGTCCATGG-TCTGTACTCTGAATCTGTGGCCAC  1044

seq1  TGACTCCTTCCTTCTGGGTGTGTGGC  1075
      |||||||||| | |  ||||||||||
seq2  TGACTCCTTCTTCC--GGTGTGTGGC  1068