BAC Information

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BAC

Clone NameB6Ng01-061G19
Chromosome6 (Build37)
Map Location 22,684,829 - 22,685,444
singlet/doubletsinglet
Overlap genenone
Upstream geneTspan12, LOC100041358, Ing3, A430107O13Rik, LOC667307, Wnt16, D6Wsu176e, LOC100040948, LOC100040959, LOC668018, LOC668022
Downstream genePtprz1, Aass, EG668044, EG546894, EG668053, EG384356, Fezf1, Cadps2, Rnf133, Rnf148
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-061G19.bB6Ng01-061G19.g
ACCDH882104DH882105
length907616
definitionDH882104|Mus musculus domesticus DNA, BAC clone: B6Ng01-061G19, 5' end.DH882105|Mus musculus domesticus DNA, BAC clone: B6Ng01-061G19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccagtctctttgcaaaccatagcttagtattcattgccagccttc
tgtggctcagtctactatttactctttcctgccttcgataactatcactc
ttctcacgagtcctgtgatatcaactttttacaacaccccatagaagtga
gaccatgtattatttacatatagtgtctggcttactccacttaccataat
gttttccaaacccatgcatgcggatgctaatggcagcatttccttctttt
tgcaaccaaatattcctccattgtgcatatgtcctgtatttttaaaaaca
tgcccattcctttagtggacattgaggttgtttctgtttcttggttatta
taggtaatgtgctagttggttttatgtcaactcgacactagctcgagtca
ctttggaagaaggaattcacttgattaagtgcccctactggagtggcttg
tggataagtctgaggtgcattttcttgatagatcatggagatggggtagc
tcagctcatgatgggtggcgccatctctgggctggtggtcttgggtactg
ttagaaagcaggatgagcaaaccatgaagaacaagcccgtaagcagcacc
cctgcatggcttctgcttcacttcccacttccaggttacggccctgagtt
cccgggctgacgtcccttcatgacggactgtggctgggatatgtgggaga
aactaagcccatcttccccaagttacttgtattcactgtgttttatgaca
gcaacagggaagctaacacagacatgtagcgaagtaggatggcagtaaac
attgaactgcagcgatttcttcctgaactaagtttctctttatctgtctc
tccttgtctctctaatttccctctctctctctctctctctctctctctct
ctctctc
gaattccttatcttacatttgttcagaattagaattcggatctgagccta
tgtttgggaatgcactatctttagaaatattagcaattaaaagaaacata
tgaccaaatttcctgtggactggttcaagtggttcaagtagagaagacca
ttcactctgtcgcttattccatgtaatgctgctgcctctgaagctgtctc
tgcttccagataaaaccagggctcacattcccttttgtcagttttagaca
gaaggaaaataaacaaggacaggggcaggggtggggtgggggaaagcttg
attaagacactaaaaccatgttcattgtcttgctattctgtggcttgtta
acgtagggagttggccatttggttcactggtttgtgatattgccggaagg
attcaagtgaaaagaaggctagtttcttaagtgttttcctttgagctaaa
attagcagtgagttgcaaggaaacaattggtataaaataacctctctttg
cttctttctctataaaattgaattccttctaagcattccattatctctga
gtttttggactacgaggctgtgctgaaatgggtaatgggaagtttgtaat
atgtacttggtgtgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_22684829_22685444
seq2: B6Ng01-061G19.g_68_683 (reverse)

seq1  TTCACACCAAGTACCTACTACAAACTTCCCATTACCTATTTCAGCACAGC  50
      |||||||||||||| || |||||||||||||||||| |||||||||||||
seq2  TTCACACCAAGTACATATTACAAACTTCCCATTACCCATTTCAGCACAGC  50

seq1  CTCGTAGTCCTGAAACTCAGAGATAATGGAATGCTTAGAAGGAATTCAAT  100
      ||||||||||  ||||||||||||||||||||||||||||||||||||||
seq2  CTCGTAGTCCAAAAACTCAGAGATAATGGAATGCTTAGAAGGAATTCAAT  100

seq1  TTTATAGAGAACGAAGCAAAGAGAGGTTATTTTATACCAATTGTTTCCTT  150
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TTTATAGAGAAAGAAGCAAAGAGAGGTTATTTTATACCAATTGTTTCCTT  150

seq1  GCAACTCACTGCTAATTTTAGCTCAAAGGAAAACACTTAAGAAACTAGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTCACTGCTAATTTTAGCTCAAAGGAAAACACTTAAGAAACTAGCC  200

seq1  TTCTTTTCACTTGAATCCTTCCGGCAATATCACAAACCAGTGAACCAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTCACTTGAATCCTTCCGGCAATATCACAAACCAGTGAACCAAAT  250

seq1  GGCCAACTCCCTACGTTAACAAGCCACAGAATAGCAAGACAATGAACATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAACTCCCTACGTTAACAAGCCACAGAATAGCAAGACAATGAACATG  300

seq1  GTTTTAGTGTCTTAATCAAGCTTTCCCCCACCCCACCCCTGCCCCTGTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAGTGTCTTAATCAAGCTTTCCCCCACCCCACCCCTGCCCCTGTCC  350

seq1  TTGTTTATTTTCCTTCTGTCTAAAACTGACAAAAGGGAATGTGAGCCCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTATTTTCCTTCTGTCTAAAACTGACAAAAGGGAATGTGAGCCCTG  400

seq1  GTTTTATCTGGAAGCAGAGACAGCTTCAGAGGCAGCAGCATTACATGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTATCTGGAAGCAGAGACAGCTTCAGAGGCAGCAGCATTACATGGAA  450

seq1  TAAGCGACAGAGTGAATGGTCTTCTCTACTTGAACCACTTGAACCAGTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCGACAGAGTGAATGGTCTTCTCTACTTGAACCACTTGAACCAGTCC  500

seq1  ACAGGAAATTTGGTCATATGTTTCTTTTAATTGCTAATATTTCTAAAGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAAATTTGGTCATATGTTTCTTTTAATTGCTAATATTTCTAAAGAT  550

seq1  AGTGCATTCCCAAACATAGGCTCAGATCCGAATTCTAATTCTGAACAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCATTCCCAAACATAGGCTCAGATCCGAATTCTAATTCTGAACAAAT  600

seq1  GTAAGATAAGGAATTC  616
      ||||||||||||||||
seq2  GTAAGATAAGGAATTC  616