BAC Information

Click to search

BAC

Clone NameB6Ng01-061H14
Chromosome6 (Build37)
Map Location 61,833,314 - 61,834,260
singlet/doubletsinglet
Overlap geneC130092O11Rik
Upstream geneMmrn1, LOC100041756, LOC100041764, LOC100042694
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-061H14.bB6Ng01-061H14.g
ACCDH882142DH882143
length324944
definitionDH882142|Mus musculus domesticus DNA, BAC clone: B6Ng01-061H14, 5' end.DH882143|Mus musculus domesticus DNA, BAC clone: B6Ng01-061H14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tttgaaattttatggacatatttagttatttcagtaaaaaatataaacac
atttttatgcatgaaaacataaacatatgacatttctaaaccttctattt
acttttgggtatccatgagcaaagagcaggtagctttgttttcttccttt
cttcctccttcccagaacttggctgccttatcaagcttcaatagcagaga
tgagcccacccatactgcaacttgatatgccaaggtgagttgatattcat
gggaggcctcgccttctcttagcagaattttagaagggtagcatgtgggg
agagggagatagagggaggggctg

gaattctaagttagcactggtcgcttcttaaccaaaagtattttagagct
aaagttatcctgccaactctatcagttctgacttgatgaacctggattta
aaccttgtatttgggaagaacacttaataaaaataaaaataaaccaaaaa
aacatatatctacatataggagaaaagaaaatgggtactgctttaggtgc
ttccaattgtgtttgtgtgtgtgtgtatgtgcctgtgtgtacctgtgtaa
gcttatgtgcctgaagtgattttaagtactcacagggtcggggtcagaga
gcctggtattccctaaaatgggagttgcagacagttgtgagatacctcat
gtgaggactgggagagtgaggttctctgcaagagccctcagtgcttctta
tcattgaaccatcttttcagtctgtggaggtttgaatgagaatggcctca
caggttcatatatttgaatgtttgatctataattggttaaatggtttggg
caggataaggccttttttggccttgttggaggaggtgtgtcaatgagggt
ggggctttgaggtttcaaaagcccttgcctttctcagttagttctctctc
tctctctgcctgattgttgtctcaggatgcatgctcccagctatttattg
ctctagcaccaagtctgcctgcctgctgttaacctccctgccaggatagt
tatgggctcaccctctgcagctgtaagcaacccataaactctcctagaca
gtcagtgtcctcttcacagaaatagaagagcaactaaaaacacctcctct
tcttctttcatttaaaattataactttattagttagcactttatttatgt
ggattatatgtaatatactttgatatttctctggaataatatttatattt
tattgctatttttatttttggcatatctgtgatactctaacaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_61833314_61834260
seq2: B6Ng01-061H14.g_68_1011

seq1  GAATTCTAAGTTAGCACTGGTCGCTTCTTAACCAAAAGTATTTTAGAGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAGTTAGCACTGGTCGCTTCTTAACCAAAAGTATTTTAGAGCT  50

seq1  AAAGTTATCCTGCCAACTCTATCAGTTCTGACTTGATGAACCTGGATTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTATCCTGCCAACTCTATCAGTTCTGACTTGATGAACCTGGATTTA  100

seq1  AACCTTGTATTTGGGAAGAACACTTAATAAAAATAAAAATAAACCAAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTGTATTTGGGAAGAACACTTAATAAAAATAAAAATAAACCAAAAA  150

seq1  AACATATATCTACATATAGGAGAAAAGAAAATGGGTACTGCTTTAGGTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATATATCTACATATAGGAGAAAAGAAAATGGGTACTGCTTTAGGTGC  200

seq1  TTCCAATTGTGTTTGTGTGTGTGTGTATGTGCCTGTGTGTACCTGTGTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAATTGTGTTTGTGTGTGTGTGTATGTGCCTGTGTGTACCTGTGTAA  250

seq1  GCTTATGTGCCTGAAGTGATTTTAAGTACTCACAGGGTCGGGGTCAGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTATGTGCCTGAAGTGATTTTAAGTACTCACAGGGTCGGGGTCAGAGA  300

seq1  GCCTGGTATTCCCTAAAATGGGAGTTGCAGACAGTTGTGAGATACCTCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGTATTCCCTAAAATGGGAGTTGCAGACAGTTGTGAGATACCTCAT  350

seq1  GTGAGGACTGGGAGAGTGAGGTTCTCTGCAAGAGCCCTCAGTGCTTCTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGACTGGGAGAGTGAGGTTCTCTGCAAGAGCCCTCAGTGCTTCTTA  400

seq1  TCATTGAACCATCTTTTCAGTCTGTGGAGGTTTGAATGAGAATGGCCTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGAACCATCTTTTCAGTCTGTGGAGGTTTGAATGAGAATGGCCTCA  450

seq1  CAGGTTCATATATTTGAATGTTTGATCTATAATTGGTTAAATGGTTTGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTCATATATTTGAATGTTTGATCTATAATTGGTTAAATGGTTTGGG  500

seq1  CAGGATAAGGCCTTTTTTGGCCTTGTTGGAGGAGGTGTGTCAATGAGGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATAAGGCCTTTTTTGGCCTTGTTGGAGGAGGTGTGTCAATGAGGGT  550

seq1  GGGGCTTTGAGGTTTCAAAAGCCCTTGCCTTTCTCAGTTAGTTCTCTCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCTTTGAGGTTTCAAAAGCCCTTGCCTTTCTCAGTTAGTTCTCTCTC  600

seq1  TCTCTCTGCCTGATTGTTGTCTCAGGATGCATGCTCCCAGCTATTTATTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTGCCTGATTGTTGTCTCAGGATGCATGCTCCCAGCTATTTATTG  650

seq1  CTCTAGCACCAAGTCTGCCTGCCTGCTGTTAACCTCCCTGCCAGGATAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGCACCAAGTCTGCCTGCCTGCTGTTAACCTCCCTGCCAGGATAGT  700

seq1  TATGGGCTCACCCTCTGCAGCTGTAAGCAACCCATAAACTCTCCTAGACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGGCTCACCCTCTGCAGCTGTAAGCAACCCATAAACTCTCCTAGACA  750

seq1  GTCAGTGTCCCCTTCACAGAAATAGAAGAGCAACT-AAAACACCTCCTC-  798
      |||||||||| |||||||||||||||||||||||| ||||||||||||| 
seq2  GTCAGTGTCCTCTTCACAGAAATAGAAGAGCAACTAAAAACACCTCCTCT  800

seq1  TCTTCTTTCATTTAAAATTATAACTTTATTAGTTAGCAC-TTATTTATGT  847
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TCTTCTTTCATTTAAAATTATAACTTTATTAGTTAGCACTTTATTTATGT  850

seq1  GGATTATATGTTATATACTTTGATATTTCTCTGGGAATAAATATTTTATA  897
      ||||||||||| |||||||||||||||||||| ||||| |||| ||||||
seq2  GGATTATATGTAATATACTTTGATATTTCTCT-GGAAT-AATA-TTTATA  897

seq1  TTTTATTGCACATTTTCATGTTTGGCAATATCTGTGATTACTCTAACAAC  947
      |||||||||  ||||| || |||||| |||||||||| ||||||||||||
seq2  TTTTATTGC-TATTTTTATTTTTGGC-ATATCTGTGA-TACTCTAACAAC  944


| Home | SequenceCutter | Blast | Download |