MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-062A11
Chromosome	6 (Build37)
Map Location	6,903,254 - 7,069,858
singlet/doublet	doublet
Overlap gene	Acn9
Upstream gene	Dync1i1, Slc25a13, EG667462, EG667468, LOC667471, LOC100040096, Shfm1, LOC545826, Dlx6as, Dlx5
Downstream gene	EG667500, Tac1, LOC667511, Asns, EG667529, C1galt1, LOC100040661, Col28a1
Link	Open Mouse BAC browser

Click to get alignment info.

name	Dync1i1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13426 MGI:107743
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc25a13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50799 MGI:1354721
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG667462 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667462 MGI:3644294
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	EG667468 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667468 MGI:3644257
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 164 ESTs, 10 Proteins pseudo : _no_value

name	LOC667471 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667471
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 190 ESTs, 42 Proteins pseudo : _no_value

name	LOC100040096 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040096
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Shfm1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20422 MGI:109238
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC545826 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:545826
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 137 ESTs, 4 Proteins pseudo : _no_value

name	Dlx6as (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13397 MGI:1195963
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dlx5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13395 MGI:101926
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Acn9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71238 MGI:1913288
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG667500 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667500 MGI:3643440
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Tac1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21333 MGI:98474
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667511 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667511
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Asns (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:27053 MGI:1350929
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG667529 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667529 MGI:3643672
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	C1galt1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:94192 MGI:2151071
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040661 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040661
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 331 ESTs, 7 Proteins

name	Col28a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:213945 MGI:2685312
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dync1i1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802700 GeneID:13426 MGI:107743
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dynein cytoplasmic 1 intermediate chain 1 transcript_id : NM_010063.2

name	Slc25a13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131091 GeneID:50799 MGI:1354721
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13 transcript_id : NM_015829.2

name	EG667462 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149254838 GeneID:667462 MGI:3644294
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : predicted gene, EG667462 transcript_id : XM_990672.2

name	LOC100040096 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254841 GeneID:100040096
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100040096 transcript_id : XM_001474083.1

name	Shfm1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6677940 GeneID:20422 MGI:109238
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : split hand/foot malformation (ectrodactyly) type 1 transcript_id : NM_009169.1

name	Dlx5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:38569499 GeneID:13395 MGI:101926
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : distal-less homeobox 5 transcript_id : NM_198854.1

name	Dlx5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:38524595 GeneID:13395 MGI:101926
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : distal-less homeobox 5 transcript_id : NM_010056.2

name	Acn9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124248480 GeneID:71238 MGI:1913288
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ACN9 homolog (S. cerevisiae) transcript_id : NM_001077713.1

name	Tac1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130452 GeneID:21333 MGI:98474
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tachykinin 1 transcript_id : NM_009311.2

name	Asns (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142363799 GeneID:27053 MGI:1350929
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : asparagine synthetase transcript_id : NM_012055.2

name	C1galt1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40538829 GeneID:94192 MGI:2151071
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1 transcript_id : NM_052993.2

name	LOC100040661 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254860 GeneID:100040661
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 331 ESTs, 7 Proteins product : similar to Rnps1 protein transcript_id : XM_001475305.1

name	Col28a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:83745130 GeneID:213945 MGI:2685312
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : collagen, type XXVIII, alpha 1 transcript_id : NM_001037865.1

name	Dync1i1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753656 CCDS:CCDS19903.1 GeneID:13426 MGI:107743
definition	GO_component : GO:0005868 - cytoplasmic dynein complex [Evidence IEA]; GO:0030286 - dynein complex [Evidence TAS]; GO:0005874 - microtubule [Evidence IEA] GO_function : GO:0003777 - microtubule motor activity [Evidence IEA]; GO:0003774 - motor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007018 - microtubule-based movement [Evidence IEA] codon_start : 1 exception : mismatches in translation product : dynein, cytoplasmic, intermediate chain 1 protein_id : NP_034193.1

name	Slc25a13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7657583 GeneID:50799 MGI:1354721
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005743 - mitochondrial inner membrane [Evidence IDA] [Evidence TAS]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005313 - L-glutamate transporter activity [Evidence IMP] GO_process : GO:0015810 - aspartate transport [Evidence IMP]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : citrin product : solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13 protein_id : NP_056644.1

name	EG667462 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149254839 GeneID:667462 MGI:3644294
definition	codon_start : 1 product : hypothetical protein protein_id : XP_995766.2

name	LOC100040096 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254842 GeneID:100040096
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474133.1

name	Shfm1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6677941 GeneID:20422 MGI:109238
definition	GO_component : GO:0005829 - cytosol [Evidence IEA]; GO:0000502 - proteasome complex (sensu Eukaryota) [Evidence ISS]; GO:0043234 - protein complex [Evidence IEA] GO_function : GO:0008233 - peptidase activity [Evidence ISS]; GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0000724 - double-strand break repair via homologous recombination [Evidence IMP]; GO:0006508 - proteolysis [Evidence ISS] codon_start : 1 product : split hand/foot deleted gene 1 protein_id : NP_033195.1

name	Dlx5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38524596 CCDS:CCDS19905.1 GeneID:13395 MGI:101926
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007409 - axonogenesis [Evidence IMP]; GO:0007275 - development [Evidence IEA]; GO:0030326 - embryonic limb morphogenesis [Evidence IGI]; GO:0042472 - inner ear morphogenesis [Evidence IMP]; GO:0007399 - nervous system development [Evidence IMP]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IMP] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : distal-less homeobox 5 isoform 1 protein_id : NP_034186.2

name	Dlx5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38569500 GeneID:13395 MGI:101926
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007409 - axonogenesis [Evidence IMP]; GO:0007275 - development [Evidence IEA]; GO:0030326 - embryonic limb morphogenesis [Evidence IGI]; GO:0042472 - inner ear morphogenesis [Evidence IMP]; GO:0007399 - nervous system development [Evidence IMP]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IMP] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : distal-less homeobox 5 isoform 2 protein_id : NP_942151.1

name	Acn9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124248481 GeneID:71238 MGI:1913288
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005758 - mitochondrial intermembrane space [Evidence ISS]; GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006094 - gluconeogenesis [Evidence ISS] codon_start : 1 product : ACN9 homolog protein_id : NP_001071181.1

name	Tac1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678207 CCDS:CCDS19906.1 GeneID:21333 MGI:98474
definition	GO_component : GO:0043025 - cell soma [Evidence IDA]; GO:0005576 - extracellular region [Evidence IDA] GO_process : GO:0006954 - inflammatory response [Evidence IDA]; GO:0007218 - neuropeptide signaling pathway [Evidence IEA]; GO:0048265 - response to pain [Evidence IMP]; GO:0019233 - sensory perception of pain [Evidence IMP]; GO:0007268 - synaptic transmission [Evidence IEA]; GO:0007217 - tachykinin signaling pathway [Evidence IEA] codon_start : 1 note : substance P; neurokinin 1; preprotachykinin A; neurokinin A product : tachykinin 1 protein_id : NP_033337.1

name	Asns (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33469123 CCDS:CCDS19907.1 GeneID:27053 MGI:1350929
definition	GO_function : GO:0004066 - asparagine synthase (glutamine-hydrolyzing) activity [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA] GO_process : GO:0008652 - amino acid biosynthesis [Evidence IEA]; GO:0006529 - asparagine biosynthesis [Evidence IEA]; GO:0006541 - glutamine metabolism [Evidence IEA]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 function : asparagine synthesis product : asparagine synthetase protein_id : NP_036185.1

name	C1galt1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40538830 CCDS:CCDS19908.1 GeneID:94192 MGI:2151071
definition	GO_function : GO:0008378 - galactosyltransferase activity [Evidence ISS]; GO:0016263 - glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA] GO_process : GO:0001525 - angiogenesis [Evidence IMP]; GO:0016267 - O-glycan processing, core 1 [Evidence ISS] codon_start : 1 exception : mismatches in translation note : core 1 beta3-Gal-T; core 1 UDP-galactose:N-acetylgalactosamine-alpha-R beta 1,3-galactosyltransferase product : core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1 protein_id : NP_443719.2

name	LOC100040661 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254861 GeneID:100040661
definition	codon_start : 1 product : similar to Rnps1 protein protein_id : XP_001475355.1

name	Col28a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83745131 GeneID:213945 MGI:2685312
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA] GO_function : GO:0004867 - serine-type endopeptidase inhibitor activity [Evidence IEA] GO_process : GO:0006817 - phosphate transport [Evidence IEA] codon_start : 1 function : extracellular matrix protein note : collagen alpha 2(VI)-like product : collagen 28 protein_id : NP_001032954.1

name	EG667500 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667500
definition	number : 1 pseudo : _no_value

name	EG667500 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667500
definition	number : 2 pseudo : _no_value

name	EG667500 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667500
definition	number : 3 pseudo : _no_value

name	LOC667511 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667511
definition	number : 1 pseudo : _no_value

name	LOC667511 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667511
definition	number : 2 pseudo : _no_value

name	LOC667511 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667511
definition	number : 3 pseudo : _no_value

name	EG667529 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667529
definition	number : 3 pseudo : _no_value

name	EG667529 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667529
definition	number : 2 pseudo : _no_value

name	EG667529 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667529
definition	number : 1 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:5464
definition	standard_name : RH46992

name	(CDS detail)
type	STS
link
xref	UniSTS:164309
definition	standard_name : AI785475

name	(CDS detail)
type	STS
link
xref	UniSTS:179331
definition	standard_name : AW108044

name	(CDS detail)
type	STS
link
xref	UniSTS:167488
definition	standard_name : RH127277

name	(CDS detail)
type	STS
link
xref	UniSTS:87249
definition	standard_name : RH91820

name	(CDS detail)
type	STS
link
xref	UniSTS:280646
definition	standard_name : DLX5_2316

name	(CDS detail)
type	STS
link
xref	UniSTS:498371
definition	standard_name : Dlx5

name	(CDS detail)
type	STS
link
xref	UniSTS:179335
definition	standard_name : AI385752

name	(CDS detail)
type	STS
link
xref	UniSTS:269979
definition	standard_name : MARC_9717-9718:996688547:1

name	(CDS detail)
type	STS
link
xref	UniSTS:498467
definition	standard_name : Dlx5

name	(CDS detail)
type	STS
link
xref	UniSTS:116582
definition	standard_name : D6Mit139

name	(CDS detail)
type	STS
link
xref	UniSTS:207922
definition	standard_name : AI415012

name	(CDS detail)
type	STS
link
xref	UniSTS:207923
definition	standard_name : D17584

name	(CDS detail)
type	STS
link
xref	UniSTS:207924
definition	standard_name : U38940

name	(CDS detail)
type	STS
link
xref	UniSTS:179341
definition	standard_name : AV284120

name	(CDS detail)
type	STS
link
xref	UniSTS:225067
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:479251
definition	standard_name : Rnps1

name	(CDS detail)
type	STS
link
xref	UniSTS:116583
definition	standard_name : D6Mit348

name	EG667468 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149254858 GeneID:667468 MGI:3644257
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 164 ESTs, 10 Proteins product : predicted gene, EG667468 pseudo : _no_value transcript_id : XR_032062.1

name	LOC667471 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149254840 GeneID:667471
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 190 ESTs, 42 Proteins product : similar to heterogeneous nuclear ribonucleoprotein A1 pseudo : _no_value transcript_id : XR_031544.1

name	LOC545826 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149254859 GeneID:545826
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 137 ESTs, 4 Proteins product : similar to farnesyl pyrophosphate synthase pseudo : _no_value transcript_id : XR_032085.1

name	Dlx6as (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:84872134 GeneID:13397 MGI:1195963
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : distal-less homeobox 6, antisense transcript_id : NR_002839.1

clone name	MSMg01-459I12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-115G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-204L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-109M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-069N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-409J01
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-456L14
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-392K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-351O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-194I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-375M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-083D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-369C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-087L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-112M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-313E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504O14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-383G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-191F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-066I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-150K20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-270L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-503D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-514N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-109G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-091K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-195B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-294N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416P24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-055D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-137B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-301D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193P06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335G09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-070B04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302N04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344C10
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-062A11.b	B6Ng01-062A11.g
ACC	DH882546	DH882547
length	1,111	461
definition	DH882546\|Mus musculus domesticus DNA, BAC clone: B6Ng01-062A11, 5' end.	DH882547\|Mus musculus domesticus DNA, BAC clone: B6Ng01-062A11, 3' end.
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(6,903,254 - 6,904,384)	(7,069,390 - 7,069,858)
sequence	gaattcaactcaaaccttattttcagttgatggatactttgaccacaaga ggaaagctgagttgaaaagtcagagaaacataaagtttcatcctcctaat agtgcattgctcatagtgtgtgtggtgtggggaacaaagctcatctgccc tatcatgacttgccttctttcttcaaggtctaatcatgccactgtatatt agaatctgtctgtctggtccatcaactccatttccatcattgatttgcta gtgccttgtgggtttttttttttttttttgttccttttaggctgaatcaa ttcttttattagttcgttggcaggatgtttttttccacattttaataagg agctttggctctgaaagaaggatttattatacttgttaatttaacctgaa gagaaaccagaaaaaaaaagcaaactagaataaaataattttcaattttc aaggatattaacagatgaaatttggtagcaaagatgccctgaaataaaat aaccacactgctcttcaatccttgccattaatgtgatttgtcatgatacc aaattaaatttattaagatagtattttaggcaagtaatttccttaaagtt aaaggaaaaactctattcaagggcataaatactggagtgcttcttatttt gtgctgtacagtagtgagacctcgaaatgagcaaaaaacattgtaggcta ttgtcttttttgatttcataattgttacacagacagaaatcctatgtttg tgagacaactgcacacattcttgccctcttgtgttttaccaacatgcaaa tcctgatgtgctcaacaccactaataaacgctctgcaccaatgcaacagt aatgtggttattacatgtctagagcacagccagaccggtgggaaacactc cctcctcctgaaaacgccttcctctaagtattcttgtcagaagctagaat cagtaactagcaaagtacggcctgctgagtattatgagacaaaaaagaaa acacaaagcagagcaccatggagtttgcttgtaatgttagttcaacaagc tgtgggaagtcaccgacgtgagccgacacacctggttcttgcagtgatgc ctcctaccagc	agtaggtgttgctgtttggcaacatttttgagttcttcattccagggcct tttaaatacctaccacttggagctcctcctcacctgagaaatgttataca atgccaggcttacaaataaaatagatacacaagtcaaacaaatttgaatc agttctgggctggtgagatggattgacatctaagtaaccctagctaaaca cagtgggtgaaatttggtttggatgaaccaagaaatttgtctatttcttt taggctttccagtttaaacagggtgaagatattttaagtattcccttagg agactgtgaatttctttggtatgtgttgtgagatttccctgtttgtttct aattctgttagtttgagattctctctctctctctctctctctctctctct ctctctctctctctctctctcccgccttcatttttattatttcttgccac cacctgacttt
quality values	Open. Hide. 61 47 32 38 61 43 31 55 61 61 49 36 55 61 61 61 61 61 61 61 61 61 61 49 38 59 17 17 13 10 7 13 21 16 15 19 59 59 59 61 59 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 49 43 45 36 27 44 28 30 44 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 55 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 52 49 41 49 49 50 43 43 59 59 59 59 31 59 38 35 28 43 52 52 49 36 44 41 49 36 36 44 43 30 35 44 41 36 26 49 52 44 37 36 59 59 59 44 39 39 59 43 45 52 49 49 59 61 61 59 59 52 52 29 49 37 59 61 59 59 49 52 52 49 52 29 43 43 36 37 59 59 59 50 44 28 45 36 37 27 59 52 52 37 59 52 35 59 45 37 49 43 43 52 52 45 49 36 49 43 52 59 43 49 49 52 59 59 59 49 59 59 59 52 59 52 52 22 49 27 41 43 59 59 59 41 35 59 59 55 59 59 61 61 55 55 52 52 52 52 52 52 52 52 36 50 52 52 52 52 52 55 55 55 55 55 61 52 52 52 43 50 52 61 55 52 52 41 52 41 52 37 39 26 41 52 52 55 43 41 23 50 38 43 49 49 55 55 55 50 55 55 50 55 49 55 50 37 49 26 50 41 49 49 50 55 50 55 50 55 55 50 50 55 55 50 50 50 50 55 55 49 55 50 55 49 55 37 43 49 37 43 50 43 50 50 50 50 50 50 50 50 47 43 50 47 50 50 43 52 35 43 37 36 50 43 45 45 50 42 38 50 39 39 33 37 43 27 50 50 50 53 50 50 50 61 61 53 50 61 53 53 50 31 52 39 32 27 31 50 61 61 61 61 61 35 46 39 33 38 35 53 47 47 47 53 47 47 47 47 52 52 52 46 47 47 47 50 52 47 45 53 47 47 53 38 32 33 32 42 32 38 34 42 43 32 42 38 53 47 43 47 50 47 47 27 42 45 46 45 47 39 53 33 45 46 45 50 47 45 52 40 50 45 50 47 42 43 35 47 45 45 39 33 47 47 42 43 45 52 37 47 53 50 50 53 32 47 43 47 33 53 47 27 35 52 43 43 47 32 39 47 47 57 50 42 38 39 47 47 45 53 30 44 43 45 38 28 46 52 41 39 24 53 53 53 57 53 41 45 23 43 50 32 30 35 28 47 45 57 41 38 45 36 39 30 37 34 42 38 36 15 40 57 57 37 32 33 37 30 33 36 39 38 23 38 34 30 53 53 37 48 42 40 48 44 37 42 33 25 40 31 52 28 39 41 42 31 52 37 28 41 39 35 35 36 52 42 30 48 30 57 53 34 33 23 28 17 33 35 21 32 41 37 29 53 29 35 25 41 29 41 33 25 37 29 33 31 36 33 20 32 30 27 30 44 17 31 33 35 32 29 25 51 30 29 29 41 36 36 34 29 29 19 18 29 14 32 36 39 28 17 31 29 25 29 23 20 33 27 36 22 47 39 27 27 24 22 38 21 25 17 29 29 28 28 29 30 24 29 25 29 18 29 29 14 14 32 12 16 38 18 23 16 43 21 22 46 22 30 43 32 21 15 28 29 18 29 24 11 10 24 29 20 22 28 24 29 46 39 29 21 26 28 15 21 20 12 21 5 23 21 29 28 16 21 18 19 28 20 14 31 15 25 27 19 12 16 33 15 24 30 34 26 33 24 20 21 31 22 30 25 16 17 18 36 14 28 19 51 24 21 15 19 24 22 17 19 23 26 28 19 30 23 19 7 15 22 31 15 21 19 26 19 4 8 14 14 38 51 33 51 23 9 35 44 27 16 12 16 8 8 33 28 10 10 6 9 9 7 10 10 6 14 13 21 10 7 8 30 15 35 7 35 20 27 11 5 3 5 8 6 8 10 21 22 5 29 9 5 19 6 7 5 8 19 9 5 4 14 3 31 6 22 14 22 9 13 7 10 18 4 3 4 10 8 6 7 5 18 12 7 12 5 6 5 6 5 8 9 14 13 20 6 11 7 9 13 11 23 6 5 4 8 11 11 23 6 4 8 5 3 5 10 23 9 9 16	Open. Hide. 12 14 12 12 10 14 14 19 18 28 37 43 61 61 61 61 61 61 59 59 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 36 30 52 37 35 43 41 41 37 44 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 59 61 59 61 61 61 61 59 55 55 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 59 61 61 61 59 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 49 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 61 59 59 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 61 59 61 59 59 55 59 61 61 61 61 61 61 61 61 61 61 61 61 59 55 59 59 59 59 59 55 44 37 59 59 59 59 59 59 61 61 61 59 52 45 43 30 35 35 36 39 43 31 31 32 31 28 28 19 22 12 27 24 10 15 10 12 22 23 20 13 26 27 22 9 23 18 22 13 13 24 24 14 16 31 18 26 27 20 12 13 11 13 18 15 19 9 12

Alignment Information

BAC End 1

BAC End 2

seq1: chr6_6903254_6904384
seq2: B6Ng01-062A11.b_46_1156

seq1  GAATTCAACTCAAACCTTATTTTCAGTTGATGGATACTTTGACCACAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACTCAAACCTTATTTTCAGTTGATGGATACTTTGACCACAAGA  50

seq1  GGAAAGCTGAGTTGAAAAGTCAGAGAAACATAAAGTTTCATCCTCCTAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGCTGAGTTGAAAAGTCAGAGAAACATAAAGTTTCATCCTCCTAAT  100

seq1  AGTGCATTGCTCATAGTGTGTGTGGTGTGGGGAACAAAGCTCATCTGCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCATTGCTCATAGTGTGTGTGGTGTGGGGAACAAAGCTCATCTGCCC  150

seq1  TATCATGACTTGCCTTCTTTCTTCAAGGTCTAATCATGCCACTGTATATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATGACTTGCCTTCTTTCTTCAAGGTCTAATCATGCCACTGTATATT  200

seq1  AGAATCTGTCTGTCTGGTCCATCAACTCCATTTCCATCATTGATTTGCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCTGTCTGTCTGGTCCATCAACTCCATTTCCATCATTGATTTGCTA  250

seq1  GTGCCTTGTGGGTTTTTTTTTTTTTTTTTGTTCCTTTTAGGCTGAATCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTTGTGGGTTTTTTTTTTTTTTTTTGTTCCTTTTAGGCTGAATCAA  300

seq1  TTCTTTTATTAGTTCGTTGGCAGGATGTTTTTTTCCACATTTTAATAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTATTAGTTCGTTGGCAGGATGTTTTTTTCCACATTTTAATAAGG  350

seq1  AGCTTTGGCTCTGAAAGAAGGATTTATTATACTTGTTAATTTAACCTGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTGGCTCTGAAAGAAGGATTTATTATACTTGTTAATTTAACCTGAA  400

seq1  GAGAAACCAGAAAAAAAAAGCAAACTAGAATAAAATAATTTTCAATTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAACCAGAAAAAAAAAGCAAACTAGAATAAAATAATTTTCAATTTTC  450

seq1  AAGGATATTAACAGATGAAATTTGGTAGCAAAGATGCCCTGAAATAAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATATTAACAGATGAAATTTGGTAGCAAAGATGCCCTGAAATAAAAT  500

seq1  AACCACACTGCTCTTCAATCCTTGCCATTAATGTGATTTGTCATGATACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACACTGCTCTTCAATCCTTGCCATTAATGTGATTTGTCATGATACC  550

seq1  AAATTAAATTTATTAAGATAGTATTTTAGGCAAGTAATTTCCTTAAAGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAAATTTATTAAGATAGTATTTTAGGCAAGTAATTTCCTTAAAGTT  600

seq1  AAAGGAAAAACTCTATTCAAGGGCATAAATACTGGAGTGCTTCTTATTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAAAAACTCTATTCAAGGGCATAAATACTGGAGTGCTTCTTATTTT  650

seq1  GTGCTGTACAGTAGTGAGACCTCGAAATGAGCAAAAAACATTGTAGGCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGTACAGTAGTGAGACCTCGAAATGAGCAAAAAACATTGTAGGCTA  700

seq1  TTGTCTTTTTTGATTTCATAATTGTTACACAGACAGAAATCCTATGTTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTTTTTTGATTTCATAATTGTTACACAGACAGAAATCCTATGTTTG  750

seq1  TGAGACAACTGCACACATTCTTGCCCTCTTGTGTTTTACCAACATGCAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACAACTGCACACATTCTTGCCCTCTTGTGTTTTACCAACATGCAAA  800

seq1  TCCTGATGTGCTCAACACCACTAATAAACGCTCTGCACCAATGCAACAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGATGTGCTCAACACCACTAATAAACGCTCTGCACCAATGCAACAGT  850

seq1  AATGTGGTTATTACATGTCTAGAGCACAGCCAGACCGGTGGGAAACACTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGGTTATTACATGTCTAGAGCACAGCCAGACCGGTGGGAAACACTC  900

seq1  CCTCCTCCTGAAAAACGCCTTCCCCTAAGTATTCTTGTCAGAAGCTAGAA  950
      |||||||||| |||||||||||| ||||||||||||||||||||||||||
seq2  CCTCCTCCTG-AAAACGCCTTCCTCTAAGTATTCTTGTCAGAAGCTAGAA  949

seq1  TCAGTAACTAAGCAAAGTACGGCCTGCTGAGTATTATGAAGACAAAAAAG  1000
      ||||||||| |||||||||||||||||||||||||||| |||||||||||
seq2  TCAGTAACT-AGCAAAGTACGGCCTGCTGAGTATTATG-AGACAAAAAAG  997

seq1  AAAAAACAACAAAAGCAGGAGCACCATGGGAGGTTTGGCTTGGTTATGTT  1050
      |||| ||    |||||| ||||||||| ||||  || |||| || |||||
seq2  AAAACAC----AAAGCA-GAGCACCAT-GGAG--TTTGCTT-GTAATGTT  1038

seq1  AGTTTCAAACAAGGCTGTTGGGAAAGGTCACACGACAGTGAGCCGACACA  1100
      ||||   ||||| |||| ||||||  ||||| |||| |||||||||||||
seq2  AGTT--CAACAA-GCTG-TGGGAA--GTCAC-CGAC-GTGAGCCGACACA  1080

seq1  -CTGGTTCTGGCAAGTGATGCCTCCTACCAGC  1131
       |||||||| || |||||||||||||||||||
seq2  CCTGGTTCTTGC-AGTGATGCCTCCTACCAGC  1111

seq1: chr6_7069390_7069858
seq2: B6Ng01-062A11.g_71_537 (reverse)

seq1  AAAGTCAGGAGGTGGCAAGAAATAATAAAAATGAAGGCAGAAGAGAGAGA  50
      ||||||||| |||||||||||||||||||||||||||| |  ||||||||
seq2  AAAGTCAGGTGGTGGCAAGAAATAATAAAAATGAAGGCGG--GAGAGAGA  48

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATCTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATCTCA  98

seq1  AACTAACAGAATTAGAAACAAACAGGGAAATCTCACAACACATACCAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAACAGAATTAGAAACAAACAGGGAAATCTCACAACACATACCAAAG  148

seq1  AAATTCACAGTCTCCTAAGGGAATACTTAAAATATCTTCACCCTGTTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCACAGTCTCCTAAGGGAATACTTAAAATATCTTCACCCTGTTTAA  198

seq1  ACTGGAAAGCCTAAAAGAAATAGACAAATTTCTTGGTTCATCCAAACCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGAAAGCCTAAAAGAAATAGACAAATTTCTTGGTTCATCCAAACCAA  248

seq1  ATTTCACCCACTGTGTTTAGCTAGGGTTACTTAGATGTCAATCCATCTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCACCCACTGTGTTTAGCTAGGGTTACTTAGATGTCAATCCATCTCA  298

seq1  CCAGCCCAGAACTGATTCAAATTTGTTTGACTTGTGTATCTATTTTATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCCAGAACTGATTCAAATTTGTTTGACTTGTGTATCTATTTTATTT  348

seq1  GTAAGCCTGGCATTGTATAACATTTCTCAGGTGAGGAGGAGCTCCAAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGCCTGGCATTGTATAACATTTCTCAGGTGAGGAGGAGCTCCAAGTG  398

seq1  GTAGGTATTTAAAAGGCCCTGGAATGAAGAACTCAAAAATGTTGCCAAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGTATTTAAAAGGCCCTGGAATGAAGAACTCAAAAATGTTGCCAAAC  448

seq1  AGCAACACCTACTGAATTC  469
      |||||||||||||||||||
seq2  AGCAACACCTACTGAATTC  467

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BAC

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Alignment Information