BAC Information

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BAC

Clone NameB6Ng01-063A12
Chromosome6 (Build37)
Map Location 75,532,935 - 75,673,505
singlet/doubletdoublet
Overlap genenone
Upstream geneEG668132, LOC668136, LOC621306, LOC100042942, LOC668143
Downstream geneEG668145, EG546907, LOC100042952, LOC668153, EG668155
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-063A12.bB6Ng01-063A12.g
ACCDH883251DH883252
length1,084978
definitionDH883251|Mus musculus domesticus DNA, BAC clone: B6Ng01-063A12, 5' end.DH883252|Mus musculus domesticus DNA, BAC clone: B6Ng01-063A12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(75,532,935 - 75,534,037)(75,672,566 - 75,673,505)
sequence
gaattcttcctgttgaaataaaaaaaaaggtcttatccaaagttggtttt
tgtgattgactcttcatgtgagaaagtagctgttaatttctaatgattta
aatcaaactataccattataatttgtctgatggctccagttacaggagaa
cagttagctttccattccttatgttgggttgcactaaaatgccctctcaa
gcttccacttcctatctcttcatcagccttctttcaagtgtgtggactga
tcatgttaacaacaccaatctttcaaatttagacttgtatgtaccatggc
tgtttggtgatcacataatgttataaactagggctcatgttcttttccca
tcaatagttttagtaggttgcccgagtacatatacatgcataagtatctg
tgatgttcatttcccttctgaggttaatacagttatcagtctgcctggtg
aactatgtgatttgtttggagacacagtaatgccagattttctgctcttt
ggaagagagtagtttggcagcaggatctctctctgaaacaatccactgtt
gctatagccagataagttatactaatttatggcctatgtattctgaggac
tacatcatgtgcactacacaaatctgttgatatttcttttgagtctggtt
ttgggaattatgcatggtacataagcctatcagattcaaaataatgaaat
agattttcagtgtaaatctctatcctgtagtataaagcatatataattat
atattttatataatatatagtacatgttatataaataattatatcatata
tattgtcctatatcaaaaaagagaccatatgtcagatacttctatttaga
ttatccagtccctacagacttcctacctgattttagcagttgagaaactg
ctgttgagataagcatacaaatgagccaatcggatttgatcccaagtatc
aacccagaacatgtgaactgatataggctgcttgaaacaaatctaattag
aaaagcttgctactcttcacagctaaatggtagtaggcagtcagaacatg
ctcacaaatatagtatgtgatattgcttgcattt
gaattctgtactgcaataaactatctcttagtatacaagtgcattttcac
aaaacatgacttgttgctaagaaattaatgagaaagaaatgaaacttcag
aagaaataaaatgaagtttaagtgagtactttggtttaattttaaatcag
caactaacactcagaatatctttacatacatagttcacatttcagaacta
gtgaaggttattaattatcagatttttaattttttttcaagtttttcagt
gtttttatttcatgttttatatatatataattcaaaaagaaaataaaaat
gcatcttaatttatgtattatgtattcttaatgagctaatttcagaacac
ctgttaaataattttcaagtacatgattactttttaattttcaagatgct
cctatatttcttctaaattaattgaacaccaataagttttctttctgcca
ataatgtaaaaaatatttttctctacattcttgccaattttgttgtcttt
caccattaatagtacttttaaaacaaatattagattatatagaattgtgg
tatagtatacattgtcttgatgatgacaataaagatacctaatatttttc
atgttttttgtttatttctttttctactttggaggagtatctgtataaat
actttcaccatactttgattatattatttatattcatattgatgactaga
ctgatgtttttatatttgctttgtaaagatttatttatttacatcccaaa
tattgtccccctccctatcccccctgccagaattcatcctccatgccatc
tctcctttacctctaggagggtgctctccaggcatctctcctccctaggg
aatcaaatctctagaggatctggcacatcctctctgagccagacagcagt
actctgctacatatgtgatgagggagagtctcagagcagccatagtgctc
tttgtttgtgctagactctggagctccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_75532935_75534037
seq2: B6Ng01-063A12.b_46_1129

seq1  GAATTCTTCCTGTTGAAATAAAAAAAAAGGTCTTATCCAAAGTTGGTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCCTGTTGAAATAAAAAAAAAGGTCTTATCCAAAGTTGGTTTT  50

seq1  TGTGATTGACTCTTCATGTGAGAAAGTAGCTGTTAATTTCTAATGATTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATTGACTCTTCATGTGAGAAAGTAGCTGTTAATTTCTAATGATTTA  100

seq1  AATCAAACTATACCATTATAATTTGTCTGATGGCTCCAGTTACAGGAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAACTATACCATTATAATTTGTCTGATGGCTCCAGTTACAGGAGAA  150

seq1  CAGTTAGCTTTCCATTCCTTATGTTGGGTTGCACTAAAATGCCCTCTCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTAGCTTTCCATTCCTTATGTTGGGTTGCACTAAAATGCCCTCTCAA  200

seq1  GCTTCCACTTCCTATCTCTTCATCAGCCTTCTTTCAAGTGTGTGGACTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCACTTCCTATCTCTTCATCAGCCTTCTTTCAAGTGTGTGGACTGA  250

seq1  TCATGTTAACAACACCAATCTTTCAAATTTAGACTTGTATGTACCATGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTTAACAACACCAATCTTTCAAATTTAGACTTGTATGTACCATGGC  300

seq1  TGTTTGGTGATCACATAATGTTATAAACTAGGGCTCATGTTCTTTTCCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGGTGATCACATAATGTTATAAACTAGGGCTCATGTTCTTTTCCCA  350

seq1  TCAATAGTTTTAGTAGGTTGCCCGAGTACATATACATGCATAAGTATCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATAGTTTTAGTAGGTTGCCCGAGTACATATACATGCATAAGTATCTG  400

seq1  TGATGTTCATTTCCCTTCTGAGGTTAATACAGTTATCAGTCTGCCTGGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTTCATTTCCCTTCTGAGGTTAATACAGTTATCAGTCTGCCTGGTG  450

seq1  AACTATGTGATTTGTTTGGAGACACAGTAATGCCAGATTTTCTGCTCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATGTGATTTGTTTGGAGACACAGTAATGCCAGATTTTCTGCTCTTT  500

seq1  GGAAGAGAGTAGTTTGGCAGCAGGATCTCTCTCTGAAACAATCCACTGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAGAGTAGTTTGGCAGCAGGATCTCTCTCTGAAACAATCCACTGTT  550

seq1  GCTATAGCCAGATAAGTTATACTAATTTATGGCCTATGTATTCTGAGGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATAGCCAGATAAGTTATACTAATTTATGGCCTATGTATTCTGAGGAC  600

seq1  TACATCATGTGCACTACACAAATCTGTTGATATTTCTTTTGAGTCTGGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATCATGTGCACTACACAAATCTGTTGATATTTCTTTTGAGTCTGGTT  650

seq1  TTGGGAATTATGCATGGTACATAAGCCTATCAGATTCAAAATAATGAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGAATTATGCATGGTACATAAGCCTATCAGATTCAAAATAATGAAAT  700

seq1  AGATTTTCAGTGTAAATCTCTATCCTGTAGTATAAAGCATATATAATTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTTCAGTGTAAATCTCTATCCTGTAGTATAAAGCATATATAATTAT  750

seq1  ATATTTTATATAATATATAGTACATGTTATATAAATAATTATATCATATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTATATAATATATAGTACATGTTATATAAATAATTATATCATATA  800

seq1  TATTGTCCTATATCAAAAAAGAGACCATATGTCAGATACTTCTATTTAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTCCTATATCAAAAAAGAGACCATATGTCAGATACTTCTATTTAGA  850

seq1  TTATCCAGTCCCTACAGACTTCCTACCTGATTTTAGCAGTTGAGAAACTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCCAGTCCCTACAGACTTCCTACCTGATTTTAGCAGTTGAGAAACTG  900

seq1  CTGTTGAGATAAGCAATACAAATGAGCCAATCGGATTTGATCCCAAGTTA  950
      |||||||||||||| |||||||||||||||||||||||||||||||| ||
seq2  CTGTTGAGATAAGC-ATACAAATGAGCCAATCGGATTTGATCCCAAG-TA  948

seq1  TCAACCCAGAACAATGTGAACTGAATATAAGGGCTGCTTGAAACAAATCT  1000
      |||||||||||| |||||||||| |||||  |||||||||||||||||||
seq2  TCAACCCAGAAC-ATGTGAACTG-ATATA--GGCTGCTTGAAACAAATCT  994

seq1  AAATTTAGAAAAAGCTTGCTACTCTTCACAGGCTAAAATGGTAGTAGGCA  1050
      ||  |||| ||||||||||||||||||||| ||| |||||||||||||||
seq2  AA--TTAG-AAAAGCTTGCTACTCTTCACA-GCT-AAATGGTAGTAGGCA  1039

seq1  GTCAGAACAATGCTTCCAACAAAATAATTAAGTATGTGATATTGCTTGCA  1100
      |||||||| |||||  ||       |||  ||||||||||||||||||||
seq2  GTCAGAAC-ATGCTCACA-------AATATAGTATGTGATATTGCTTGCA  1081

seq1  TTT  1103
      |||
seq2  TTT  1084

seq1: chr6_75672566_75673505
seq2: B6Ng01-063A12.g_67_1002 (reverse)

seq1  CTCTGAGACTCTCCCCTCATCACATATGTAGCAGAGTACTGCCTTGTCTG  50
      |||||||||||| |||||||||||||||||||||||||||||  ||||||
seq2  CTCTGAGACTCT-CCCTCATCACATATGTAGCAGAGTACTGC--TGTCTG  47

seq1  GCCTCAGAGAGGATGTGCCAGATCCTCTAGAGATTTGATTCCCTAGGGAG  100
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  G-CTCAGAGAGGATGTGCCAGATCCTCTAGAGATTTGATTCCCTAGGGAG  96

seq1  GAGAGATGCCTGGAGAGCACCCTCCTAGAGGTAAAGGAGAGATGGCATGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGATGCCTGGAGAGCACCCTCCTAGAGGTAAAGGAGAGATGGCATGG  146

seq1  AGGATGAATTCTGGCAGGGGGGATAGGGAGGGGGACAATATTTGGGATGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGAATTCTGGCAGGGGGGATAGGGAGGGGGACAATATTTGGGATGT  196

seq1  AAATAAATAAATCTTTACAAAGCAAATATAAAAACATCAGTCTAGTCATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATAAATCTTTACAAAGCAAATATAAAAACATCAGTCTAGTCATC  246

seq1  AATATGAATATAAATAATATAATCAAAGTATGGTGAAAGTATTTATACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGAATATAAATAATATAATCAAAGTATGGTGAAAGTATTTATACAG  296

seq1  ATACTCCTCCAAAGTAGAAAAAGAAATAAACAAAAAACATGAAAAATATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTCCTCCAAAGTAGAAAAAGAAATAAACAAAAAACATGAAAAATATT  346

seq1  AGGTATCTTTATTGTCATCATCAAGACAATGTATACTATACCACAATTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATCTTTATTGTCATCATCAAGACAATGTATACTATACCACAATTCT  396

seq1  ATATAATCTAATATTTGTTTTAAAAGTACTATTAATGGTGAAAGACAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATCTAATATTTGTTTTAAAAGTACTATTAATGGTGAAAGACAACA  446

seq1  AAATTGGCAAGAATGTAGAGAAAAATATTTTTTACATTATTGGCAGAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGGCAAGAATGTAGAGAAAAATATTTTTTACATTATTGGCAGAAAG  496

seq1  AAAACTTATTGGTGTTCAATTAATTTAGAAGAAATATAGGAGCATCTTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTTATTGGTGTTCAATTAATTTAGAAGAAATATAGGAGCATCTTGA  546

seq1  AAATTAAAAAGTAATCATGTACTTGAAAATTATTTAACAGGTGTTCTGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAAAAAGTAATCATGTACTTGAAAATTATTTAACAGGTGTTCTGAA  596

seq1  ATTAGCTCATTAAGAATACATAATACATAAATTAAGATGCATTTTTATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGCTCATTAAGAATACATAATACATAAATTAAGATGCATTTTTATTT  646

seq1  TCTTTTTGAATTATATATATATAAAACATGAAATAAAAACACTGAAAAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTGAATTATATATATATAAAACATGAAATAAAAACACTGAAAAAC  696

seq1  TTGAAAAAAAATTAAAAATCTGATAATTAATAACCTTCACTAGTTCTGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAAAAAATTAAAAATCTGATAATTAATAACCTTCACTAGTTCTGAA  746

seq1  ATGTGAACTATGTATGTAAAGATATTCTGAGTGTTAGTTGCTGATTTAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAACTATGTATGTAAAGATATTCTGAGTGTTAGTTGCTGATTTAAA  796

seq1  ATTAAACCAAAGTACTCACTTAAACTTCATTTTATTTCTTCTGAAGTTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAACCAAAGTACTCACTTAAACTTCATTTTATTTCTTCTGAAGTTTC  846

seq1  ATTTCTTTCTCATTAATTTCTTAGCAACAAGTCATGTTTTGTGAAAATGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTTCTCATTAATTTCTTAGCAACAAGTCATGTTTTGTGAAAATGC  896

seq1  ACTTGTATACTAAGAGATAGTTTATTGCAGTACAGAATTC  940
      ||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTATACTAAGAGATAGTTTATTGCAGTACAGAATTC  936