BAC Information

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BAC

Clone NameB6Ng01-064G15
Chromosome6 (Build37)
Map Location 120,185,617 - 120,186,756
singlet/doubletsinglet
Overlap geneB4galnt3
Upstream geneCacna2d4, Lrtm2, Adipor2, Wnt5b, Fbxl14, Erc1, LOC666887, Rad52, Wnk1, EG406236, Ninj2
Downstream geneCcdc77, Jarid1a, Il17ra, Cecr6, Cecr5, 1700072O05Rik, Cecr2, Slc25a18, Atp6v1e1, Bcl2l13, Bid, Mical3, LOC100043793, Minpp1-ps, Pex26, Tuba8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-064G15.bB6Ng01-064G15.g
ACCDH884207DH884208
length1,2701,123
definitionDH884207|Mus musculus domesticus DNA, BAC clone: B6Ng01-064G15, 5' end.DH884208|Mus musculus domesticus DNA, BAC clone: B6Ng01-064G15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagacattcacctgcctctgcctcctgagtattgggatgaaaggt
atgagctaccactacccagtgacagtttttaaaataacttatcaataagc
tggtagtttctttgaaaaccatgacaatgtattaagaaccataaaatggg
caggagagcgcacaggctgcagaagcaacatagcttctgggacagggtcc
ctttcggaacttcatcttcagccagggggcagagctgagctccagacctc
tgtgcaccttccctgcaagaggagagcttgcctgcagagagtgctctgac
cactgagactcaggagagagttggactccaaggagtgctgacagagggta
acagaatcacaggaggaacaagctccagccagagacagctataacaacta
acatcagagattaccagatggtgaaaggcaaatgtaagaatcttacagaa
accaaggccactcaccatcatcataacccagcactcccaccacagtgagt
cctggatacccctgacacacccaaaaagcaagatttggatttaaaaatca
tatctcatgatgctggtagaggattttaagaaggacgttaataactcact
taaagaactacaggagaacacggctaaacaggtagaaagtcttaaagagg
aagcacaaaaatcccttaaagaactacaggaaacactgctaaacaggtag
aagtccttaaagaagaaacacaaaatcccttaaagaattacaggaaaaca
caaccaacaggtgatagaacaaaaccatccaagatctaaaaatggaagta
gaaacaataaagaaaccccaaaaggagacatctctggagatagaaatcct
aggaaagaaataaggaaccatagatgcgagcatcagcaacagaatacaag
gagatggagagaggatctcagtgcaaagttccatagagacatcgacacca
cagtcaaagaaaatgcaaatgcaaagatcctactcaaacattcaggaatc
caggacacaatgagagactaacttcagataaagtactagtgaagatgaag
attttttctcttaaaggccgcgcaaattttctcacaaattaatggaagaa
cttccttacctaaagaaaaagatggccagaaatacagaggctacaagaac
tccaatgaacggaccaggaaggattccccgcacctatatatcggaccaca
tggccattagagtgattaagagatgagcgaaatcctttacttaaaggcgc
gcgccttgcagatatactac
gaattctaacttctttagaattgcgtaaactgcacagagccaggagctct
ctgactctctcttctatgcttgctgaccagagagcaagcagacagggcgg
tggggacttggatctgtcctctctgtggcacggactttgtggtccttcca
tcaccttcccatggccctgccggtgctcactaagcacatgctctgtgcca
ggctctgggcacaggcgctgtatttggatccttctcatctctgtctctgt
atcgattctggcagtggatacccagccattgcttgccccgctgggagcaa
ctggagctaaagaatgtgctgattgaacgactgacacttgtcacttgtcc
cctgttaagtgattcctcctgcttctggctgggcctctccttccagagta
ccagctgccaggacctggtcctcctatagcaggtgtcacatttatgccgg
gagacagacaccggagtctcaggtgtcagacaaagcaccaccgtgggcct
catgctctgccctcacagagctcggctatcaagttaaccatcagccagag
ctttgccaacaccctcctgggggcaatacagacttcaaaggcctgaagct
tatcatcctggctctctgagaccctatagaacgcatatatcccttggtat
cattttttcacaaactctttaacatatgttaactccatggtctcctctta
ctctctctctcagaaataagaaaaaacaaagtaactaaaacggtatggtg
gtcagcccaaagtcacacagtgaaaagaaaaaccccaggaagcttcctgt
gcccgtgaacaacagtcttcagcatggatgtgcactgcaggcaggagttc
tactcttcccttgaccctccagctgatactcttgtcatacagcatgtgga
cacgtggcactgatgggaaagtgggaagacccgtcactgatgggaagggg
aagacccgtcaccgcccgtcaacgtggaggctgccgctgataccagatcc
cacagtaagactgcaggctggaacccatcttccacccaagggctgaaaac
ctagagacatttcaactacattaaggctgggctgggattttatggataca
aatgctgcactcacagtgtggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_120185617_120186756
seq2: B6Ng01-064G15.g_69_1191

seq1  GAATTCTAACTTCTTTAGAATTGCGTAAACTGCACAGAGCCAGGAGCTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAACTTCTTTAGAATTGCGTAAACTGCACAGAGCCAGGAGCTCT  50

seq1  CTGACTCTCTCTTCTATGCTTGCTGACCAGAGAGCAAGCAGACAGGGCGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTCTCTCTTCTATGCTTGCTGACCAGAGAGCAAGCAGACAGGGCGG  100

seq1  TGGGGACTTGGATCTGTCCTCTCTGTGGCACGGACTTTGTGGTCCTTCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGACTTGGATCTGTCCTCTCTGTGGCACGGACTTTGTGGTCCTTCCA  150

seq1  TCACCTTCCCATGGCCCTGCCGGTGCTCACTAAGCACATGCTCTGTGCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTTCCCATGGCCCTGCCGGTGCTCACTAAGCACATGCTCTGTGCCA  200

seq1  GGCTCTGGGCACAGGCGCTGTATTTGGATCCTTCTCATCTCTGTCTCTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTGGGCACAGGCGCTGTATTTGGATCCTTCTCATCTCTGTCTCTGT  250

seq1  ATCGATTCTGGCAGTGGATACCCAGCCATTGCTTGCCCCGCTGGGAGCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGATTCTGGCAGTGGATACCCAGCCATTGCTTGCCCCGCTGGGAGCAA  300

seq1  CTGGAGCTAAAGAATGTGCTGATTGAACGACTGACACTTGTCACTTGTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGCTAAAGAATGTGCTGATTGAACGACTGACACTTGTCACTTGTCC  350

seq1  CCTGTTAAGTGATTCCTCCTGCTTCTGGCTGGGCCTCTCCTTCCAGAGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTAAGTGATTCCTCCTGCTTCTGGCTGGGCCTCTCCTTCCAGAGTA  400

seq1  CCAGCTGCCAGGACCTGGTCCTCCTATAGCAGGTGTCACATTTATGCCGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTGCCAGGACCTGGTCCTCCTATAGCAGGTGTCACATTTATGCCGG  450

seq1  GAGACAGACACCGGAGTCTCAGGTGTCAGACAAAGCACCACCGTGGGCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAGACACCGGAGTCTCAGGTGTCAGACAAAGCACCACCGTGGGCCT  500

seq1  CATGCTCTGCCCTCACAGAGCTCGGCTATCAAGTTAACCATCAGCCAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTCTGCCCTCACAGAGCTCGGCTATCAAGTTAACCATCAGCCAGAG  550

seq1  CTTTGCCAACACCCTCCTGGGGGCAATACAGACTTCAAAGGCCTGAAGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCCAACACCCTCCTGGGGGCAATACAGACTTCAAAGGCCTGAAGCT  600

seq1  TATCATCCTGGCTCTCTGAGACCCTATAGAACGCATATATCCCTTGGTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATCCTGGCTCTCTGAGACCCTATAGAACGCATATATCCCTTGGTAT  650

seq1  CATTTTTTCACAAACTC-TTAACATATGTTAACTCCATGGTCTCCTCTTA  699
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CATTTTTTCACAAACTCTTTAACATATGTTAACTCCATGGTCTCCTCTTA  700

seq1  CTCTCTCTCTCAGAAATAAGAAAAAACAAAGTAACTAAAACGGTATGGTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCAGAAATAAGAAAAAACAAAGTAACTAAAACGGTATGGTG  750

seq1  GTCAGCCCAAGGTCACACAGTGAAAAGAAAATCCCCAGGAAGCTTCCTGT  799
      |||||||||| |||||||||||||||||||| ||||||||||||||||||
seq2  GTCAGCCCAAAGTCACACAGTGAAAAGAAAAACCCCAGGAAGCTTCCTGT  800

seq1  GCCCG-GAACAACAGTCTTCAGCATGGATGTGCACTGCAGGCAGGAGCTC  848
      ||||| ||||||||||||||||||||||||||||||||||||||||| ||
seq2  GCCCGTGAACAACAGTCTTCAGCATGGATGTGCACTGCAGGCAGGAGTTC  850

seq1  TACTCTTTCCCCTTGACCCTCCAGCTGATACTCTTGTCAATACAGCATGT  898
      |||||||  ||||||||||||||||||||||||||||| |||||||||||
seq2  TACTCTT--CCCTTGACCCTCCAGCTGATACTCTTGTC-ATACAGCATGT  897

seq1  GGACATCGGGGTCACTGATGGGAAAGTGGGAAGACCCGTCACTGATGGGA  948
      ||||| || || ||||||||||||||||||||||||||||||||||||||
seq2  GGACA-CGTGG-CACTGATGGGAAAGTGGGAAGACCCGTCACTGATGGGA  945

seq1  AAGTGGGAAGACCCGTCACCGCCCGTCACCGTGGAGGCTGCCGCTGATAC  998
      |   |||||||||||||||||||||||| |||||||||||||||||||| 
seq2  A--GGGGAAGACCCGTCACCGCCCGTCAACGTGGAGGCTGCCGCTGATA-  992

seq1  CCAGATCCCACAGTAGGACTGCAGGCTTGAGCTCCATC-TCCACCCCAGG  1047
      ||||||||||||||| ||||||||||| || | ||||| ||||||| |||
seq2  CCAGATCCCACAGTAAGACTGCAGGCTGGAAC-CCATCTTCCACCCAAGG  1041

seq1  TGCTGAAAACACTTAGAAGCATTTCCAACTTAACAGTTAAGGGCTGGGCG  1097
       |||||||  || ||||  ||||| |||||  ||| |||| |||||||| 
seq2  -GCTGAAA--ACCTAGAGACATTT-CAACT--ACA-TTAA-GGCTGGGCT  1083

seq1  TGGAGTTTAGTGGATACAAAATGCTTGCCAGCTCAGTGTGGAG  1140
       ||| |||| ||||||| |||||| |||   | ||||||||||
seq2  GGGATTTTA-TGGATAC-AAATGC-TGCACTCACAGTGTGGAG  1123