BAC Information

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BAC

Clone NameB6Ng01-064H23
Chromosome6 (Build37)
Map Location 130,988,487 - 130,989,529
singlet/doubletsinglet
Overlap geneEG625648
Upstream geneLOC100038894, LOC100038895, Klra4, LOC667769, LOC100038897, Klra8, EG654449, Klra9, Klra7, LOC100038898, Klra12, Klra10, Klra13, Klra3, Klra1, LOC100038902, LOC100038903, LOC625436, EG625473, LOC640779, LOC667793, EG667798, EG625558, LOC625566, EG636947, LOC625628
Downstream geneLOC667830, EG434094, Klra2, LOC434095, 2010012C16Rik, Styk1, Csda, LOC625758, 5430401F13Rik, LOC625781, Tas2r130, Tas2r107, Tas2r106, Tas2r104, Tas2r105, Tas2r114
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-064H23.bB6Ng01-064H23.g
ACCDH884269DH884270
length1,2071,037
definitionDH884269|Mus musculus domesticus DNA, BAC clone: B6Ng01-064H23, 5' end.DH884270|Mus musculus domesticus DNA, BAC clone: B6Ng01-064H23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacacaataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggtgagaacctggaagcaattccactaaa
atcagggagtagagaaggctgtccactctcgccctacctattcaacattg
tacttgaagtcctagcctgagcaattagacaacaaaaggagatcaagggg
atacaaattggaaaggaagaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattccatcagacaacttcaaagcc
tgataaacagcttcaatgaagtagctggatataaaattagctcaaacaag
tcaatggcctttctgtacacaaaggataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagtcacaaataatataaaataccttgggg
tgactctaactaaggaagtgaaagatctgtatgattagaacttcaagtct
ctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggatcaatatagtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccatcaaatttccaacccaattgttc
aacgaattagaaagggcaatcggcagattcatctggaataacaaaaaacc
taggatagtaaaaactcttctcaaggataaaagaacctctggtggaatca
ccaatcctgacctaaagctgtactacagagcaattgtgataaaaactgca
tggttactggtatagtgacagacaagtaaacaaatggaatagaattgaag
acccatagatgaacccacacacctctggtcacttgatctttgacagggag
gctaaaccattcagtggaaaaaaagacagcattttaacaaatggttctgg
acaactggcttttatcatttagaagaatgcgaattgatcatttctatgtc
ttgtactaaggtcaatctagtgattaggaactcacataaaccaagaaact
gaacttataggaaaaagggggaaagctcgagaattggccagggaaggttc
tatattacagcatgcggtgccttagaatcagatgacattggaactatgaa
cgcaagcttcagcaagaatccgctctatatcacaaggccctcactaattg
tatgatg
gaattctgtaataaagttgcttatctgattttcacttgattttgttttac
aaaaggaatcttctaataagtcattaccttgatataatatctctctatat
tgattgcttaggtaatacatcagtaaagcattcttaacagagcctatatt
aatatcaattatcatgttagagattttaaaattacctcccacattatatc
ttccatgattcattgcattcatagattctttcttatgttgatctacatcg
tataacttgtcactgagtaggttttctatcaaaatttatggtatttccca
caacattgtgggaaatgccataaattttgagagaagattccttcaccttg
atgacattcagtacgtttttctctgctccacaatatcatttgttcataaa
gcactgaagcactgtttaatctcatattctgtaatatatacatcaggaaa
cacaacttattcacccaaatgtcacttttaatgcatgtgtatttccgtgt
aaaatagagttgtgcttcaaatcttgtgaattttttttcctagagaatcc
tccagttgtgaatatgggagtgacccagactgactcctttcaagggaagt
tatggcttctggataattttcagaaatgaaaaagatgtgcttttcaaact
gatcatttacatgatcatatatttcatagtctgcactatcatgtctatat
tcccagaataaagataagcaactttccaaagatatctaaaggctactaca
tacaaaacttcgtgttattttgttctggaagtaatcctgtgtatgtcttt
tgggaagtagatttcttggtataatcacatgacaaacctgaaaatattaa
aaacaaatattatatgacattttggagttaggtgaaaacaatgtacatgc
ataatacatgaaaagcaccatgtgagcatcatacaaaatcagtacagaaa
tgtagcaattttcttaagaggaacaatttcataaacatgatgtatatcag
atgaaatttcataaaattgataaatattttatatatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_130988487_130989529
seq2: B6Ng01-064H23.g_70_1106

seq1  GAATTCTGTAATAAAGTTGCTTATCTGATTTTCACTTGATTTTGTTTTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTAATAAAGTTGCTTATCTGATTTTCACTTGATTTTGTTTTAC  50

seq1  AAAAGGAATCTTCTAATAAGTCATTACCTTGATATAATATCTCTCTATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGAATCTTCTAATAAGTCATTACCTTGATATAATATCTCTCTATAT  100

seq1  TGATTGCTTAGGTAATACATCAGTAAAGCATTCTTAACAGAGCCTATATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGCTTAGGTAATACATCAGTAAAGCATTCTTAACAGAGCCTATATT  150

seq1  AATATCAATTATCATGTTAGAGATTTTAAAATTACCTCCCACATTATATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCAATTATCATGTTAGAGATTTTAAAATTACCTCCCACATTATATC  200

seq1  TTCCATGATTCATTGCATTCATAGATTCTTTCTTATGTTGATCTACATCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATGATTCATTGCATTCATAGATTCTTTCTTATGTTGATCTACATCG  250

seq1  TATAACTTGTCACTGAGTAGGTTTTCTATCAAAATTTATGGTATTTCCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACTTGTCACTGAGTAGGTTTTCTATCAAAATTTATGGTATTTCCCA  300

seq1  CAACATTGTGGGAAATGCCATAAATTTTGAGAGAAGATTCCTTCACCTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATTGTGGGAAATGCCATAAATTTTGAGAGAAGATTCCTTCACCTTG  350

seq1  ATGACATTCAGTACGTTTTTCTCTGCTCCACAATATCATTTGTTCATAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACATTCAGTACGTTTTTCTCTGCTCCACAATATCATTTGTTCATAAA  400

seq1  GCACTGAAGCACTGTTTAATCTCATATTCTGTAATATATACATCAGGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGAAGCACTGTTTAATCTCATATTCTGTAATATATACATCAGGAAA  450

seq1  CACAACTTATTCACCCAAATGTCACTTTTAATGCATGTGTATTTCCGTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAACTTATTCACCCAAATGTCACTTTTAATGCATGTGTATTTCCGTGT  500

seq1  AAAATAGAGTTGTGCTTCAAATCTTGTGAATTTTTTTTCCTAGAGAATCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAGAGTTGTGCTTCAAATCTTGTGAATTTTTTTTCCTAGAGAATCC  550

seq1  TCCAGTTGTGAATATGGGAGTGACCCAGACTGACTCCTTTCAAGGGAAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTTGTGAATATGGGAGTGACCCAGACTGACTCCTTTCAAGGGAAGT  600

seq1  TATGGCTTCTGGATAATTTTCAGAAATGAAAAAGATGTGCTTTTCAAACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGCTTCTGGATAATTTTCAGAAATGAAAAAGATGTGCTTTTCAAACT  650

seq1  GATCATTTACATGATCATATATTTCATAGTCTGCACTATCATGTCTATAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATTTACATGATCATATATTTCATAGTCTGCACTATCATGTCTATAT  700

seq1  TCCCAGAATAAAGATAAGCAACTTTCCAAAGATATCTAAAAGGCTACTAC  750
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TCCCAGAATAAAGATAAGCAACTTTCCAAAGATATCT-AAAGGCTACTAC  749

seq1  ATACAAAACTTCGTGTTATTTTGTTCTGGAAGTAATCCTGTGTATGTCCT  800
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  ATACAAAACTTCGTGTTATTTTGTTCTGGAAGTAATCCTGTGTATGTCTT  799

seq1  TTGGGAAGTAGA-TTCTTGGTATAATCACATGACAAACCTGAAAATATTA  849
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TTGGGAAGTAGATTTCTTGGTATAATCACATGACAAACCTGAAAATATTA  849

seq1  AAAACAAATAATTATATGACATTTTGGAGTTAGGTGAAAACAATGTACAT  899
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAAT-ATTATATGACATTTTGGAGTTAGGTGAAAACAATGTACAT  898

seq1  GCATAATACATGAAAAAGCACCAATGTGAGCATCATACAAAATCAGTACA  949
      |||||||||||| ||||||||| |||||||||||||||||||||||||||
seq2  GCATAATACATG-AAAAGCACC-ATGTGAGCATCATACAAAATCAGTACA  946

seq1  GAAATGTAGCAATTTTCTTAAAGATGAACAATTTCATAAACATTATGTAT  999
      ||||||||||||||||||| |||| |||||||||||||||||| ||||||
seq2  GAAATGTAGCAATTTTCTT-AAGAGGAACAATTTCATAAACATGATGTAT  995

seq1  ATCAGATGATATTTCATAAAATATGATAAATATTTTATAATATT  1043
      ||||||||| |||||||||||| ||||||||||||||| |||||
seq2  ATCAGATGAAATTTCATAAAAT-TGATAAATATTTTAT-ATATT  1037