MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-065G17
Chromosome	6 (Build37)
Map Location	6,581,962 - 6,725,287
singlet/doublet	doublet
Overlap gene	LOC545826
Upstream gene	Dync1i1, Slc25a13, EG667462, EG667468, LOC667471, LOC100040096, Shfm1
Downstream gene	Dlx6as, Dlx5, Acn9, EG667500, Tac1, LOC667511, Asns
Link	Open Mouse BAC browser

Click to get alignment info.

name	Dync1i1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13426 MGI:107743
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc25a13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50799 MGI:1354721
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG667462 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667462 MGI:3644294
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	EG667468 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667468 MGI:3644257
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 164 ESTs, 10 Proteins pseudo : _no_value

name	LOC667471 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667471
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 190 ESTs, 42 Proteins pseudo : _no_value

name	LOC100040096 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040096
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Shfm1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20422 MGI:109238
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC545826 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:545826
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 137 ESTs, 4 Proteins pseudo : _no_value

name	Dlx6as (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13397 MGI:1195963
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dlx5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13395 MGI:101926
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Acn9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71238 MGI:1913288
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG667500 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667500 MGI:3643440
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Tac1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21333 MGI:98474
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667511 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667511
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Asns (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:27053 MGI:1350929
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dync1i1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802700 GeneID:13426 MGI:107743
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dynein cytoplasmic 1 intermediate chain 1 transcript_id : NM_010063.2

name	Slc25a13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131091 GeneID:50799 MGI:1354721
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13 transcript_id : NM_015829.2

name	EG667462 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149254838 GeneID:667462 MGI:3644294
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : predicted gene, EG667462 transcript_id : XM_990672.2

name	LOC100040096 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254841 GeneID:100040096
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100040096 transcript_id : XM_001474083.1

name	Shfm1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6677940 GeneID:20422 MGI:109238
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : split hand/foot malformation (ectrodactyly) type 1 transcript_id : NM_009169.1

name	Dlx5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:38569499 GeneID:13395 MGI:101926
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : distal-less homeobox 5 transcript_id : NM_198854.1

name	Dlx5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:38524595 GeneID:13395 MGI:101926
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : distal-less homeobox 5 transcript_id : NM_010056.2

name	Acn9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124248480 GeneID:71238 MGI:1913288
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ACN9 homolog (S. cerevisiae) transcript_id : NM_001077713.1

name	Tac1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130452 GeneID:21333 MGI:98474
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tachykinin 1 transcript_id : NM_009311.2

name	Asns (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142363799 GeneID:27053 MGI:1350929
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : asparagine synthetase transcript_id : NM_012055.2

name	Dync1i1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753656 CCDS:CCDS19903.1 GeneID:13426 MGI:107743
definition	GO_component : GO:0005868 - cytoplasmic dynein complex [Evidence IEA]; GO:0030286 - dynein complex [Evidence TAS]; GO:0005874 - microtubule [Evidence IEA] GO_function : GO:0003777 - microtubule motor activity [Evidence IEA]; GO:0003774 - motor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007018 - microtubule-based movement [Evidence IEA] codon_start : 1 exception : mismatches in translation product : dynein, cytoplasmic, intermediate chain 1 protein_id : NP_034193.1

name	Slc25a13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7657583 GeneID:50799 MGI:1354721
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005743 - mitochondrial inner membrane [Evidence IDA] [Evidence TAS]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005313 - L-glutamate transporter activity [Evidence IMP] GO_process : GO:0015810 - aspartate transport [Evidence IMP]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : citrin product : solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13 protein_id : NP_056644.1

name	EG667462 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149254839 GeneID:667462 MGI:3644294
definition	codon_start : 1 product : hypothetical protein protein_id : XP_995766.2

name	LOC100040096 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254842 GeneID:100040096
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474133.1

name	Shfm1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6677941 GeneID:20422 MGI:109238
definition	GO_component : GO:0005829 - cytosol [Evidence IEA]; GO:0000502 - proteasome complex (sensu Eukaryota) [Evidence ISS]; GO:0043234 - protein complex [Evidence IEA] GO_function : GO:0008233 - peptidase activity [Evidence ISS]; GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0000724 - double-strand break repair via homologous recombination [Evidence IMP]; GO:0006508 - proteolysis [Evidence ISS] codon_start : 1 product : split hand/foot deleted gene 1 protein_id : NP_033195.1

name	Dlx5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38524596 CCDS:CCDS19905.1 GeneID:13395 MGI:101926
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007409 - axonogenesis [Evidence IMP]; GO:0007275 - development [Evidence IEA]; GO:0030326 - embryonic limb morphogenesis [Evidence IGI]; GO:0042472 - inner ear morphogenesis [Evidence IMP]; GO:0007399 - nervous system development [Evidence IMP]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IMP] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : distal-less homeobox 5 isoform 1 protein_id : NP_034186.2

name	Dlx5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38569500 GeneID:13395 MGI:101926
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007409 - axonogenesis [Evidence IMP]; GO:0007275 - development [Evidence IEA]; GO:0030326 - embryonic limb morphogenesis [Evidence IGI]; GO:0042472 - inner ear morphogenesis [Evidence IMP]; GO:0007399 - nervous system development [Evidence IMP]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IMP] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : distal-less homeobox 5 isoform 2 protein_id : NP_942151.1

name	Acn9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124248481 GeneID:71238 MGI:1913288
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005758 - mitochondrial intermembrane space [Evidence ISS]; GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006094 - gluconeogenesis [Evidence ISS] codon_start : 1 product : ACN9 homolog protein_id : NP_001071181.1

name	Tac1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678207 CCDS:CCDS19906.1 GeneID:21333 MGI:98474
definition	GO_component : GO:0043025 - cell soma [Evidence IDA]; GO:0005576 - extracellular region [Evidence IDA] GO_process : GO:0006954 - inflammatory response [Evidence IDA]; GO:0007218 - neuropeptide signaling pathway [Evidence IEA]; GO:0048265 - response to pain [Evidence IMP]; GO:0019233 - sensory perception of pain [Evidence IMP]; GO:0007268 - synaptic transmission [Evidence IEA]; GO:0007217 - tachykinin signaling pathway [Evidence IEA] codon_start : 1 note : substance P; neurokinin 1; preprotachykinin A; neurokinin A product : tachykinin 1 protein_id : NP_033337.1

name	Asns (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33469123 CCDS:CCDS19907.1 GeneID:27053 MGI:1350929
definition	GO_function : GO:0004066 - asparagine synthase (glutamine-hydrolyzing) activity [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA] GO_process : GO:0008652 - amino acid biosynthesis [Evidence IEA]; GO:0006529 - asparagine biosynthesis [Evidence IEA]; GO:0006541 - glutamine metabolism [Evidence IEA]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 function : asparagine synthesis product : asparagine synthetase protein_id : NP_036185.1

name	EG667500 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667500
definition	number : 1 pseudo : _no_value

name	EG667500 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667500
definition	number : 2 pseudo : _no_value

name	EG667500 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667500
definition	number : 3 pseudo : _no_value

name	LOC667511 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667511
definition	number : 1 pseudo : _no_value

name	LOC667511 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667511
definition	number : 2 pseudo : _no_value

name	LOC667511 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667511
definition	number : 3 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:130846
definition	standard_name : D6Mit296

name	(CDS detail)
type	STS
link
xref	UniSTS:116578
definition	standard_name : RH90722

name	(CDS detail)
type	STS
link
xref	UniSTS:124217
definition	standard_name : 37.MMHAP14FLE4.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:5464
definition	standard_name : RH46992

name	(CDS detail)
type	STS
link
xref	UniSTS:164309
definition	standard_name : AI785475

name	(CDS detail)
type	STS
link
xref	UniSTS:179331
definition	standard_name : AW108044

name	(CDS detail)
type	STS
link
xref	UniSTS:167488
definition	standard_name : RH127277

name	(CDS detail)
type	STS
link
xref	UniSTS:87249
definition	standard_name : RH91820

name	(CDS detail)
type	STS
link
xref	UniSTS:280646
definition	standard_name : DLX5_2316

name	(CDS detail)
type	STS
link
xref	UniSTS:498371
definition	standard_name : Dlx5

name	(CDS detail)
type	STS
link
xref	UniSTS:179335
definition	standard_name : AI385752

name	(CDS detail)
type	STS
link
xref	UniSTS:269979
definition	standard_name : MARC_9717-9718:996688547:1

name	(CDS detail)
type	STS
link
xref	UniSTS:498467
definition	standard_name : Dlx5

name	(CDS detail)
type	STS
link
xref	UniSTS:116582
definition	standard_name : D6Mit139

name	(CDS detail)
type	STS
link
xref	UniSTS:207922
definition	standard_name : AI415012

name	(CDS detail)
type	STS
link
xref	UniSTS:207923
definition	standard_name : D17584

name	(CDS detail)
type	STS
link
xref	UniSTS:207924
definition	standard_name : U38940

name	EG667468 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149254858 GeneID:667468 MGI:3644257
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 164 ESTs, 10 Proteins product : predicted gene, EG667468 pseudo : _no_value transcript_id : XR_032062.1

name	LOC667471 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149254840 GeneID:667471
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 190 ESTs, 42 Proteins product : similar to heterogeneous nuclear ribonucleoprotein A1 pseudo : _no_value transcript_id : XR_031544.1

name	LOC545826 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149254859 GeneID:545826
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 137 ESTs, 4 Proteins product : similar to farnesyl pyrophosphate synthase pseudo : _no_value transcript_id : XR_032085.1

name	Dlx6as (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:84872134 GeneID:13397 MGI:1195963
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : distal-less homeobox 6, antisense transcript_id : NR_002839.1

clone name	MSMg01-355G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-091P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459I12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-313N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-115G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-204L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-109M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-069N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-409J01
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-456L14
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-392K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-351O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-194I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-375M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-083D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-369C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-087L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-112M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-313E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504O14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-383G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-191F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-066I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526P12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112A19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193P06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335G09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-070B04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076F19
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-065G17.b	B6Ng01-065G17.g
ACC	DH884898	DH884899
length	491	1,006
definition	DH884898\|Mus musculus domesticus DNA, BAC clone: B6Ng01-065G17, 5' end.	DH884899\|Mus musculus domesticus DNA, BAC clone: B6Ng01-065G17, 3' end.
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(6,581,962 - 6,582,427)	(6,724,289 - 6,725,287)
sequence	gaattccttgtgtacagcgtaaaatatcagtatcttttaaagcaattgac aaacaatttatccaagaaggtgtttcattttatgcttccaccagcaatat ttgacagccctagatactctgcatacttgtctacacttagtattgttaac cacttccattttaacaagtgaacttacagcatttaacaattaatgaatag tcatactcatgaatgagtatcctctatgggtcattaccaagatgtcttct tcactaggaagtgacttcaagttctttgtttcatttttaacttgctcttt ttgttactattttttggaagtttttttttttttataaactcctacacatg acttttcctaacacatatgaagctccaaatattttttctcagcccatagc ttaacttatcaatggcttttaggggaagtctattggagaaaaaaaaaatc actacttcatttttgaattcttaattaattaaaaataaaat	gaattcatgctgtcttaaaagtctacccctggtacctcatgtatcccatg gggttctgactttattgaacttgaggatcatttcttgtgaatcctctata catcacatggttctgcacattagtagatagtggctcatgttttaattttg agatctgatacttttacatgttctggaagtttagcttcaccgtgtgtttt ctgttaggacacagtttatgaacaagtgaaaagtatttacacattggttt caatattatgttgaaagttagtaatctctctttgtatcaacatccttttg ggtagaatatatatgactttgggcatttttctatgtagtttagtgaaatg atctgttcagaagttgttgagaaaatcatggtagattaagaaaggcagaa aggataataagggcaaactgttgttttaagtatgacatgatgttctcaaa attaagtgtctggaagaaagttatcttgagtcaggttttatctacacagc cagtatatgttcagaatctggaatgttgattgactatagtttcagagtca gatattttatcctgatgagttctttcatccatttagtgaattttttctca agactctgggtatacttacttttatgcattttctcataagaacattaaaa aaaaaacagaaatgaagactttgaattcatgtaactattcttagtctttg catcttaaaataatttaagattattattaactactgatgacaattctcct ccaaaagtattgaacagataggatatctatgttagcctatccaaagctca gagagcacggcatagtcggggagtgggcagaatgtaagagggaatagagt gttgtggatgctatcttctggggcttggtctaaaagttacacgtctttga ttcttcaaagcagctgcagtgagagcgtaggcttgtcaccaagcaaggta aaggggtctgaaagtcttccaagatttacctaggcatcaaccttgttggt tggttg
quality values	Open. Hide. 7 10 6 6 7 10 25 17 29 15 12 9 12 24 20 8 23 30 31 32 32 41 33 24 17 9 6 6 4 4 7 5 8 5 5 6 14 11 13 10 15 13 38 30 22 10 14 11 8 10 7 33 33 14 17 43 46 46 43 32 31 46 35 30 19 37 47 26 9 18 6 11 11 16 15 8 10 15 19 32 24 23 37 52 52 53 57 41 38 16 46 47 32 42 39 43 47 47 47 47 42 25 47 53 45 33 52 53 57 53 53 50 42 17 34 37 52 50 47 42 42 39 38 47 45 37 27 42 47 42 42 37 45 52 24 53 47 20 14 8 8 16 20 47 57 45 53 38 45 53 47 32 47 47 53 53 47 20 53 53 53 35 34 47 46 38 32 47 42 47 47 42 43 61 42 27 61 11 13 18 16 14 18 47 27 30 27 17 16 21 12 8 17 20 47 27 42 35 35 24 22 27 26 47 38 47 50 47 27 47 47 47 42 42 46 50 26 50 42 38 52 61 29 61 45 32 39 52 61 38 35 52 12 14 10 13 10 10 8 26 17 47 24 39 29 52 13 15 24 13 16 18 10 13 14 16 8 27 35 47 33 35 45 21 25 14 13 14 10 32 34 22 24 27 16 19 14 11 8 17 13 14 11 13 21 23 33 30 13 14 17 14 16 24 19 17 15 13 21 17 29 13 13 10 14 10 13 22 31 17 61 61 15 14 10 8 7 10 10 7 14 23 32 61 61 61 61 50 50 61 61 35 24 16 14 28 13 10 10 13 10 10 11 7 7 8 9 7 13 13 11 7 10 17 14 8 10 10 9 12 24 14 8 8 7 8 9 9 9 8 8 7 8 7 7 8 7 10 17 13 10 13 19 19 24 33 27 13 13 13 6 5 8 19 20 12 14 13 10 13 13 24 9 10 13 16 14 10 9 9 8 9 13 17 11 7 8 19 20 13 7 13 33 21 11 21 8 19 17 11 11 10 19 21 17 10 10 8 8 8 13 8 8 13 13 13 21 16 9 8 7 11 6 6 8 13 13 9 7 16 30 19 16 8 7 16 18 10 14 8 8 5 6 11 8 7 10 6 4 4 8 6 7 6 7 6 7 6 8 8 7	Open. Hide. 47 30 17 32 53 10 11 9 5 5 6 4 5 6 7 12 17 25 37 43 39 47 61 61 50 61 61 61 61 61 61 61 61 49 55 55 55 55 49 55 61 61 49 61 61 61 55 36 18 27 17 17 15 22 30 27 49 43 52 41 55 55 61 61 61 61 61 61 61 61 61 61 61 55 55 61 49 49 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 59 59 61 59 59 59 61 61 61 61 59 61 59 61 61 61 59 61 61 52 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 59 59 59 59 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 61 61 59 61 59 59 59 59 61 61 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 59 59 59 59 61 61 61 59 59 61 59 61 59 61 59 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 52 61 61 61 61 61 61 55 55 55 61 61 55 61 61 61 61 61 61 55 61 61 61 61 61 61 61 47 55 61 61 55 61 61 61 61 61 61 55 61 61 55 61 61 61 61 61 61 61 61 61 55 55 55 52 52 61 61 55 61 55 61 55 61 61 61 55 61 61 61 55 61 61 55 61 61 61 37 43 34 55 35 50 43 43 37 50 61 61 55 61 38 61 55 61 61 55 47 61 61 49 61 61 61 50 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 55 47 61 55 47 55 61 61 47 61 55 61 61 43 61 61 61 61 61 61 61 32 55 55 55 55 55 31 31 18 25 43 27 61 61 61 61 61 61 50 61 61 31 50 61 61 50 61 61 61 61 61 61 45 61 53 45 20 47 43 47 61 40 39 53 61 61 45 61 43 61 50 50 52 43 16 23 33 53 61 50 61 61 43 45 47 39 27 43 31 50 61 50 61 61 50 39 61 61 23 35 43 33 37 50 52 52 53 61 35 53 50 50 61 61 61 53 53 36 61 43 47 47 53 27 61 45 27 35 61 61 53 53 50 61 61 43 52 52 40 50 53 27 41 53 53 50 45 47 45 36 45 53 61 37 53 39 38 45 28 47 42 45 52 25 57 47 57 53 53 52 50 53 24 31 24 53 38 40 53 36 17 53 34 30 37 33 30 53 53 53 50 43 53 50 47 32 50 33 45 30 31 40 53 45 31 50 38 34 39 40 52 22 14 53 23 42 16 53 39 52 42 47 42 47 53 47 46 47 42 30 16 42 53 52 25 19 40 32 42 22 32 13 8 53 47 33 36 33 45 47 45 24 45 53 37 26 14 30 38 33 47 21 41 52 10 29 24 34 53 50 52 45 50 40 16 20 29 17 8 35 33 34 53 34 18 45 37 42 30 23 26 10 45 15 23 45 20 37 32 35 17 10 26 30 38 24 45 26 50 35 37 45 30 24 14 19 26 28 37 31 40 26 33 53 28 37 50 44 25 11 24 12 9 9 23 35 32 36 26 13 38 24 40 33 28 22 19 31 27 52 32 33 30 41 30 32 29 19 31 23 27 31 35 29 26 25 57 22 19 29 31 39 28 10 45 6 28 16 29 10 29 33 20 12 11 5 23 8 20 31 15 53 53 12 57 12 27 53 44 33 20 33 12 43 23 21 29 15 20 27 13 27 7 15 24 11 10 5 8 6 28 14 24 26 14 45 23 25 48 15 51 25 28 12 9 10 14 12 14 30 13 12 18 21 27 6 9 7 14 14 20 7 18 28 25 48 48 28 14 21 16 22 30 10 28 30 25 30 8 47 24 22 48 31 19 16 23 23 11 4 5 5 9 13 17 9 18 37 29 16 45 10 16 9 5 5 39 8 18 15 8 7 7 20 18 34 19 23 19 14 10 14 18 12 8 39 10 21 23 14 17 5 5 9 7 27 41 46 33 10 17 7 6 20 31 29 15 35 13 14 14 26 36 27 31 16 12 6 36 28 17 23 20 10 17 21 10 9 10 12 10 7 9 9 11 23 12 22 7 39 22 13 14 29 9 9 11 17 29

Alignment Information

BAC End 1

BAC End 2

seq1: chr6_6581962_6582427
seq2: B6Ng01-065G17.b_39_529

seq1  GAATTCCTTGTGTACAGCGTAAAATATAAGTAACTTTTAAAGCAATTGAC  50
      ||||||||||||||||||||||||||| |||| |||||||||||||||||
seq2  GAATTCCTTGTGTACAGCGTAAAATATCAGTATCTTTTAAAGCAATTGAC  50

seq1  AAACAATTTATCCAAGAAGGTGTTTCATTTTATGCTTCCACCAGCAATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAATTTATCCAAGAAGGTGTTTCATTTTATGCTTCCACCAGCAATAT  100

seq1  TTGACAGCCCTAGATACTCTGCATACTTGTCTACACTTAGTATTGTTAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACAGCCCTAGATACTCTGCATACTTGTCTACACTTAGTATTGTTAAC  150

seq1  CACTTCCATTTTAACAAGTGAACTTACAGCATTTAACAATTAATGAATAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCCATTTTAACAAGTGAACTTACAGCATTTAACAATTAATGAATAG  200

seq1  TCATACTCATGAATGAGTATCCTCTAT-GGTCATTACCAAGATGTCTTCT  249
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TCATACTCATGAATGAGTATCCTCTATGGGTCATTACCAAGATGTCTTCT  250

seq1  TCACTAGGAAGTGACTTCAAGTTCTTTG-TTCATTTTTAACTTGCTCTTT  298
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TCACTAGGAAGTGACTTCAAGTTCTTTGTTTCATTTTTAACTTGCTCTTT  300

seq1  TTGTTACTA-TTTTTGGAAG-TTTTTTTTTTTTATAAACT-CTACACATG  345
      ||||||||| |||||||||| ||||||||||||||||||| |||||||||
seq2  TTGTTACTATTTTTTGGAAGTTTTTTTTTTTTTATAAACTCCTACACATG  350

seq1  AC-TTTCCTAACACATATG-AGCTCCAAATA-TTTTTCTCAGCCCATAGC  392
      || |||||||||||||||| ||||||||||| ||||||||||||||||||
seq2  ACTTTTCCTAACACATATGAAGCTCCAAATATTTTTTCTCAGCCCATAGC  400

seq1  TT-ACTTATCAAT-GCATTTA-GGGATGTCTATT-GAG-AGACAAAAATC  437
      || |||||||||| || |||| |||| ||||||| ||| | | |||||||
seq2  TTAACTTATCAATGGCTTTTAGGGGAAGTCTATTGGAGAAAAAAAAAATC  450

seq1  ACTACTTCA-TTTTGAATTCT-----------AAATAAAAT  466
      ||||||||| |||||||||||           |||||||||
seq2  ACTACTTCATTTTTGAATTCTTAATTAATTAAAAATAAAAT  491

seq1: chr6_6724289_6725287
seq2: B6Ng01-065G17.g_66_1062 (reverse)

seq1  AACAA-GTTGATGCCTAGGTAAATCTTTGGGAGAACTTTCAGACCCCCTA  49
      ||||| |||||||||||||||||||||  |||  ||||||||||||| | 
seq2  AACAAGGTTGATGCCTAGGTAAATCTT--GGAAGACTTTCAGACCCCTTT  48

seq1  CCCTTGCCTTGGTGACAAGCCTACGCTTCTGCACTTGCAGCTGCTGTGAA  99
       ||||| ||||||||||||||||||| ||| ||| |||||||||| ||||
seq2  ACCTTG-CTTGGTGACAAGCCTACGC-TCT-CAC-TGCAGCTGCTTTGAA  94

seq1  GAATTCAAGGACGTGTAACTTTTAGACCATG-CCCAGAAGATAGCATTCC  148
      ||| |||| |||||||||||||||||||| | |||||||||||||| |||
seq2  GAA-TCAAAGACGTGTAACTTTTAGACCAAGCCCCAGAAGATAGCA-TCC  142

seq1  ACAACACTCTA-TCCCTCTTACATTCTGCCCACTTCCCGACTCTGCCGTG  197
      ||||||||||| |||||||||||||||||||||| ||||||| |||||||
seq2  ACAACACTCTATTCCCTCTTACATTCTGCCCACTCCCCGACTATGCCGTG  192

seq1  CTCTCTGAGCTTTGGATAGGCTAACATAGATATCCTATCTGTTC-ATACT  246
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CTCTCTGAGCTTTGGATAGGCTAACATAGATATCCTATCTGTTCAATACT  242

seq1  TTTGGAGGAGAATTGTCATCAGTAGTTAATAATAATCTTAAATTATTTTT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TTTGGAGGAGAATTGTCATCAGTAGTTAATAATAATCTTAAATTATTTTA  292

seq1  AGATGCAAAGACTAAGAATAGTTACATGAATTCAAAGTCTTCATTTCTGT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCAAAGACTAAGAATAGTTACATGAATTCAAAGTCTTCATTTCTGT  342

seq1  TTTTTTTTTAATGTTCTTATGAG-AAATGCATAAAAGTAAGTATA-CCAG  394
      ||||||||||||||||||||||| ||||||||||||||||||||| ||||
seq2  TTTTTTTTTAATGTTCTTATGAGAAAATGCATAAAAGTAAGTATACCCAG  392

seq1  AGTCTTGAGAAAAAATTCACTAAATGGATGAAAGAACTCATCAGGATAAA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTGAGAAAAAATTCACTAAATGGATGAAAGAACTCATCAGGATAAA  442

seq1  ATATCTGACTCTGAAACTATAGTCAATCAACATTCCAGATTCTGAACATA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTGACTCTGAAACTATAGTCAATCAACATTCCAGATTCTGAACATA  492

seq1  TACTGGCTGTGTAGATAAAACCTGACTCAAGATAACTTTCTTCCAGACAC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGGCTGTGTAGATAAAACCTGACTCAAGATAACTTTCTTCCAGACAC  542

seq1  TTAATTTTGAGAACATCATGTCATACTTAAAACAACAGTTTGCCCTTATT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTTGAGAACATCATGTCATACTTAAAACAACAGTTTGCCCTTATT  592

seq1  ATCCTTTCTGCCTTTCTTAATCTACCATGATTTTCTCAACAACTTCTGAA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTTCTGCCTTTCTTAATCTACCATGATTTTCTCAACAACTTCTGAA  642

seq1  CAGATCATTTCACTAAACTACATAGAAAAATGCCCAAAGTCATATATATT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCATTTCACTAAACTACATAGAAAAATGCCCAAAGTCATATATATT  692

seq1  CTACCCAAAAGGATGTTGATACAAAGAGAGATTACTAACTTTCAACATAA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCCAAAAGGATGTTGATACAAAGAGAGATTACTAACTTTCAACATAA  742

seq1  TATTGAAACCAATGTGTAAATACTTTTCACTTGTTCATAAACTGTGTCCT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGAAACCAATGTGTAAATACTTTTCACTTGTTCATAAACTGTGTCCT  792

seq1  AACAGAAAACACACGGTGAAGCTAAACTTCCAGAACATGTAAAAGTATCA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAAAACACACGGTGAAGCTAAACTTCCAGAACATGTAAAAGTATCA  842

seq1  GATCTCAAAATTAAAACATGAGCCACTATCTACTAATGTGCAGAACCATG  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTCAAAATTAAAACATGAGCCACTATCTACTAATGTGCAGAACCATG  892

seq1  TGATGTATAGAGGATTCACAAGAAATGATCCTCAAGTTCAATAAAGTCAG  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTATAGAGGATTCACAAGAAATGATCCTCAAGTTCAATAAAGTCAG  942

seq1  AACCCCATGGGATACATGAGGTACCAGGGGTAGACTTTTAAGACAGCATG  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCATGGGATACATGAGGTACCAGGGGTAGACTTTTAAGACAGCATG  992

seq1  AATTC  999
      |||||
seq2  AATTC  997

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Alignment Information