BAC Information

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BAC

Clone NameB6Ng01-065H05
Chromosome6 (Build37)
Map Location 111,222,491 - 111,223,485
singlet/doubletsinglet
Overlap geneGrm7
Upstream genenone
Downstream gene1700054K19Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-065H05.bB6Ng01-065H05.g
ACCDH884922DH884923
length9911,219
definitionDH884922|Mus musculus domesticus DNA, BAC clone: B6Ng01-065H05, 5' end.DH884923|Mus musculus domesticus DNA, BAC clone: B6Ng01-065H05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccacaacaggtttagtaagaaactcagtgtcagaaaactacatac
acacacacacacacacacacacacacacacatacacacacagagagatag
agagagagagagagacagagagagacagagacagagacagagacagagac
agacagagacagagagacagagacagacagagaaagagagagacagagat
agagagacagagacagagagacagagacagacagagaaagagagagtggc
acaaacatgcaaggttgcacctgcacacacaaatatatacaaagaaaaag
agcaacaatagccaagtctgtcaatcatacctgctaatgttctaggtaca
aattagacaatgatgggcttcatggaagctttattggtcccatgtaagag
atagattcagtgagcagcaaatttcagggttgataatgaactaatttttc
ttacataagagccaaccatttgaacagttgccctgaggccactgtatatg
gatgccagcatataccattaatgtggatttactaagtttttctctatctt
tcagaaagggtaagtaaggtgggagaagcagacttgtctggaatgatcat
tggtaatattattttgcaaaatggtgtcactgaggacagtagagcctgat
atttttaaaaacaaatttagatacaaagcagaggttggtagaagacagca
ttgcatttgctagtccctgaatcttgacagtttcattatcaaagtggtcc
cagatactctaaaatccaatgagatgctagacattgaaagttgtgaggta
gctgtaacatagccaaaggtttagctacagagctgtcatataatgactac
aaagaacccagtttagtctagtctcctgctcattttcctttatcactgtg
gctcagtggcaatgacattcatttgtgtaattatgacagtgttcttaatg
gggggatggaagaggaagtagacagagggagagggagagga
gaattcaataactcacttaaagagatacaggagaacactgctaaagagtt
acaagtccttaaagaaaaacaggaaaacactgctaaagagttacaagtcc
ttaaagaaaaacaggaaaacacaaccaaacaggtagaagtccttatagaa
aaacaggaaaacacatccaaacaggtgatggaaatgaacaaaaccatact
agacctaaaaagggaagtagacacaataaagaaaaccctaagtgaggcaa
cgctggagatagaaaccctaggaaagaaatctggaaccatagatgccagc
atcagcaacagaatacaagagatggaagagagaatctcaggtgcagaaga
caccatagagaacatcggcacaacaattaaagaaaatggaaaatgcaaaa
agatcctaactaaaaacatccaggaaatccaggacacaatgagaagacca
aacctacggataataggagtggatgagaacgaagattttcaactcaaagg
accagcaaacatcttcaacaaaattattgaagaaaacttcccaaatctaa
agaaagagatacccatgaacatacaggaagcctacagaactccaaataga
ctggaccagaaaagaaattcctcccgacacataataatcagaacatcaaa
tgcactaaataaagatagaatactaaaagcagtaagggaaaaaggtcaag
taacatataaaggcaagcctatcagaattacaccagatttttcaccagag
actatgaaagccagaagagcctggacagatgttatacagacactaagaga
acacaaatgccagcccaggctactatacccagccaaactctcaattacca
tagatggagaaccaaagtattccacgacaaaactaaattcacccatttct
ctccacgaatccagcccttcaaaaataataacagaaaaaaaccatacaag
acgggaccacgccctagaaaaacaagagatatgctcacacctaaagaaga
cagcacagaacagaatgcaactttacacaaaataacagaagcacattact
ttcttaatatctcttatatcattgactcattccataaggactaactacga
ctgctacaacgaccacatctggctctacgggaccctcagatagacgacac
tcctagtgaggctgaacttcagcatgctgtaaactgcgtgggtacctctt
atccatataatgtactaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_111222491_111223485
seq2: B6Ng01-065H05.b_44_1034 (reverse)

seq1  TCCTCTCCCTCTCCCTCTGTCT-CTTCCTCTTCCTTCCCCCACTCTATGA  49
      |||||||||||||||||||||| ||||||||||| |||||| |  || ||
seq2  TCCTCTCCCTCTCCCTCTGTCTACTTCCTCTTCCATCCCCC-CATTAAGA  49

seq1  TCACTGTCATTATTACACAAATGAATGTCATTGCCACTTGAGGCCACAGT  99
       ||||||||| |||||||||||||||||||||||||| ||| ||||||||
seq2  ACACTGTCATAATTACACAAATGAATGTCATTGCCAC-TGA-GCCACAGT  97

seq1  GATAAAAGGAAAATTGAGCAGGAGACTAGACTAAACTGGGTTTCTTTGTA  149
      ||| ||||||||| |||||||||||||||||||||||||| |||||||||
seq2  GAT-AAAGGAAAA-TGAGCAGGAGACTAGACTAAACTGGG-TTCTTTGTA  144

seq1  GTCATTATATGACAGCTCTGTAGCTAAACCTTTGGCTATGTTACAGCTAC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTATATGACAGCTCTGTAGCTAAACCTTTGGCTATGTTACAGCTAC  194

seq1  CTCACAACTTTCAATGTCTAGCATCTCATTGGATTTTAGAGTATCTGGGA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACAACTTTCAATGTCTAGCATCTCATTGGATTTTAGAGTATCTGGGA  244

seq1  CCACTTTGATAATGAAACTGTCAAGATTCAGGGACTAGC-AATGCAATGC  298
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CCACTTTGATAATGAAACTGTCAAGATTCAGGGACTAGCAAATGCAATGC  294

seq1  TGTCTTCTACCAACCTCTGCTTTGTATCTAAATTTGTTTTTAAAAATATC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTCTACCAACCTCTGCTTTGTATCTAAATTTGTTTTTAAAAATATC  344

seq1  AGGCTCTACTGTCCTCAGTGACACCATTTTGCAAAATAATATTACCAATG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTCTACTGTCCTCAGTGACACCATTTTGCAAAATAATATTACCAATG  394

seq1  ATCATTCCAGACAAGTCTGCTTCTCCCACCTTACTTACCCTTTCTGAAAG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTCCAGACAAGTCTGCTTCTCCCACCTTACTTACCCTTTCTGAAAG  444

seq1  ATAGAGAAAAACTTAGTAAATCCACATTAATGGTATATGCTGGCATCCAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGAAAAACTTAGTAAATCCACATTAATGGTATATGCTGGCATCCAT  494

seq1  ATACAGTGGCCTCAGGGCAACTGTTCAAATGGTTGGCTCTTATGTAAGAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGTGGCCTCAGGGCAACTGTTCAAATGGTTGGCTCTTATGTAAGAA  544

seq1  AAATTAGTTCATTATCAACCCTGAAATTTGCTGCTCACTGAATCTATCTC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAGTTCATTATCAACCCTGAAATTTGCTGCTCACTGAATCTATCTC  594

seq1  TTACATGGGACCAATAAAGCTTCCATGAAGCCCATCATTGTCTAATTTGT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATGGGACCAATAAAGCTTCCATGAAGCCCATCATTGTCTAATTTGT  644

seq1  ACCTAGAACATTAGCAGGTATGATTGACAGACTTGGCTATTGTTGCTCTT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAGAACATTAGCAGGTATGATTGACAGACTTGGCTATTGTTGCTCTT  694

seq1  TTTCTTTGTATATATTTGTGTGTGCAGGTGCAACCTTGCATGTTTGTGCC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTGTATATATTTGTGTGTGCAGGTGCAACCTTGCATGTTTGTGCC  744

seq1  ACTCTCTCTTTCTCTGTCTGTCTCTGTCTCTCTGTCTCTGTCTCTCTATC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCTCTTTCTCTGTCTGTCTCTGTCTCTCTGTCTCTGTCTCTCTATC  794

seq1  TCTGTCTCTCTCTTTCTCTGTCTGTCTCTGTCTCTCTGTCTCTGTCTGTC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTCTCTCTTTCTCTGTCTGTCTCTGTCTCTCTGTCTCTGTCTGTC  844

seq1  TCTGTCTCTGTCTCTGTCTCTGTCTCTCTCTGTCTCTCTCTCTCTCTCTA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTCTGTCTCTGTCTCTGTCTCTCTCTGTCTCTCTCTCTCTCTCTA  894

seq1  TCTCTCTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTA  944

seq1  TGTAGTTTTCTGACACTGAGTTTCTTACTAAACCTGTTGTGGAATTC  995
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTTTTCTGACACTGAGTTTCTTACTAAACCTGTTGTGGAATTC  991