BAC Information

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BAC

Clone NameB6Ng01-065I10
Chromosome6 (Build37)
Map Location 118,414,325 - 118,600,091
singlet/doubletdoublet
Overlap geneZfp9, Ankrd26, Cacna1c
Upstream geneLOC621462, EG640370, EG621705, LOC100043779, Zfp637, Zfp239, 4933440N22Rik, Hnrpf, Fxyd4, LOC232338, Rasgef1a, Galnact2, Ret, 1700069P05Rik, Bms1, Zfp248
Downstream geneDcp1b, Cacna2d4, Lrtm2, Adipor2, Wnt5b, Fbxl14, Erc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-065I10.bB6Ng01-065I10.g
ACCDH884974DH884975
length6561,029
definitionDH884974|Mus musculus domesticus DNA, BAC clone: B6Ng01-065I10, 5' end.DH884975|Mus musculus domesticus DNA, BAC clone: B6Ng01-065I10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(118,599,436 - 118,600,091)(118,414,325 - 118,415,357)
sequence
gaattcctcaaaaggaaccccagcaatagaggagtgaagactattagtgt
gggtgaccagagacagttgactagttaactgaggagaggataaagtggag
cctggtcgcctacaccctcattaactgtattcttcactgataaacaagct
ggaaaatgtggccttgaattttcaggcagcataccaatcagaaatcctca
tcactctggtagaaatacctaactcgagtttgcccaagaaccatggcatg
aatggcttctatcagacctgaaagactaatggcttctggacttctacctt
ccctgactgtgtggtgtgagtgagttccctgtgaaagggcagtcagcaag
aacggagaaggcggatgtgttagtcagcctggcattataactataacgtg
cctagagcaacttgcttgcaacatagctttggaggcttgagtgtagaatg
ctctcatcagtgcttccagagagagtggtagatggtggcaggattgtgtg
taggagcaacacacttgcatctgtaaccaggagtcagcaacggagcaggc
tggaatcctacaattctcagagagtaggccttcagtgatctactttctct
tccctccccttctcattcctcttccccctcctttcttccctccctccctc
ctcact
gaattcctgcaggggttctgaacttgcgctacttgttagcctttcccttc
ttggagtgtgtcttctgatgtgatgtgagttgtgacttctggataaagcc
ttccccacactcctggcactcatagggcttctcccctgtgtgttttctct
gatggatgacaaaatgggacttctgagagaaggacttcccacatatctca
cactcgtatggcttctctcccgtgtgagtcctttcgtgtaatctaaggac
tgagttcacagagaaagatttgccacactctgcacattcgtacggcttct
cccctgtatgctttctctcgtgtttggtgagatctgacttatagtaaaag
tgtttcccacacttactgcattcgaaaggtttctccccggtgtgagttcg
ctggtgcacggtgagggctgacttctggtagaagcagtttccgcactcct
tacatttgtagggtttctcccctgtgtgggttctctgatgggttttgagg
tgtgaattcctagagaagagtttcccgcactccttacatttgtagggttt
ctcccctgtgtgtgttctctgatgtactgtgaggtgtgatttttgtgaaa
agaacttcccacattccttacactgaaaaggcttctcgcctgtgtgtgtt
ttctggtgcaccaggaggtatgccttcacatagaagaacttcccacactc
cttacactcaaatggcttctcccctgtgtgtgttttctggtgctctgtga
ggtgtgggcttctgatagaaaggtttatcacactggctacattcgtaggg
ttctccccagcgtggatcctcagatgtctagtgagagacgacaggtgata
gaaattttgttacattctttaacatggggatgttttatctctggtatgga
ctttctgatggattgtgaggtcttcgttctataaaaagcttgtccacatt
ctcactttataggacttcttggtgtgtgtttctcgggtcggccagtatgg
aaaattctggcgaaaagattttcccattc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_118599436_118600091
seq2: B6Ng01-065I10.b_41_696 (reverse)

seq1  AGGGAGGAGGGAGGGAGGGAAGAAAGGAGGGGGAAGAGGAATGAGAAGGG  50
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGGAGGGAGGGAGGGAAGAAAGGAGGGGGAAGAGGAATGAGAAGGG  50

seq1  GAGGGAAGAGAAAGTAGATCACTGAAGGCCTACTCTCTGAGAATTGTAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAAGAGAAAGTAGATCACTGAAGGCCTACTCTCTGAGAATTGTAGG  100

seq1  ATTCCAGCCTGCTCCGTTGCTGACTCCTGGTTACAGATGCAAGTGTGTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCAGCCTGCTCCGTTGCTGACTCCTGGTTACAGATGCAAGTGTGTTG  150

seq1  CTCCTACACACAATCCTGCCACCATCTACCACTCTCTCTGGAAGCACTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTACACACAATCCTGCCACCATCTACCACTCTCTCTGGAAGCACTGA  200

seq1  TGAGAGCATTCTACACTCAAGCCTCCAAAGCTATGTTGCAAGCAAGTTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGCATTCTACACTCAAGCCTCCAAAGCTATGTTGCAAGCAAGTTGC  250

seq1  TCTAGGCACGTTATAGTTATAATGCCAGGCTGACTAACACATCCGCCTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGCACGTTATAGTTATAATGCCAGGCTGACTAACACATCCGCCTTC  300

seq1  TCCGTTCTTGCTGACTGCCCTTTCACAGGGAACTCACTCACACCACACAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGTTCTTGCTGACTGCCCTTTCACAGGGAACTCACTCACACCACACAG  350

seq1  TCAGGGAAGGTAGAAGTCCAGAAGCCATTAGTCTTTCAGGTCTGATAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGAAGGTAGAAGTCCAGAAGCCATTAGTCTTTCAGGTCTGATAGAA  400

seq1  GCCATTCATGCCATGGTTCTTGGGCAAACTCGAGTTAGGTATTTCTACCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATTCATGCCATGGTTCTTGGGCAAACTCGAGTTAGGTATTTCTACCA  450

seq1  GAGTGATGAGGATTTCTGATTGGTATGCTGCCTGAAAATTCAAGGCCACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGATGAGGATTTCTGATTGGTATGCTGCCTGAAAATTCAAGGCCACA  500

seq1  TTTTCCAGCTTGTTTATCAGTGAAGAATACAGTTAATGAGGGTGTAGGCG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCAGCTTGTTTATCAGTGAAGAATACAGTTAATGAGGGTGTAGGCG  550

seq1  ACCAGGCTCCACTTTATCCTCTCCTCAGTTAACTAGTCAACTGTCTCTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGCTCCACTTTATCCTCTCCTCAGTTAACTAGTCAACTGTCTCTGG  600

seq1  TCACCCACACTAATAGTCTTCACTCCTCTATTGCTGGGGTTCCTTTTGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCCACACTAATAGTCTTCACTCCTCTATTGCTGGGGTTCCTTTTGAG  650

seq1  GAATTC  656
      ||||||
seq2  GAATTC  656

seq1: chr6_118414325_118415357
seq2: B6Ng01-065I10.g_69_1097

seq1  GAATTCCTGCAGGGGTTCTGAACTTGCGCTACTTGTTAGCCTTTCCCTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGCAGGGGTTCTGAACTTGCGCTACTTGTTAGCCTTTCCCTTC  50

seq1  TTGGAGTGTGTCTTCTGATGTGATGTGAGTTGTGACTTCTGGATAAAGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGTGTGTCTTCTGATGTGATGTGAGTTGTGACTTCTGGATAAAGCC  100

seq1  TTCCCCACACTCCTGGCACTCATAGGGCTTCTCCCCTGTGTGTTTTCTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCACACTCCTGGCACTCATAGGGCTTCTCCCCTGTGTGTTTTCTCT  150

seq1  GATGGATGACAAAATGGGACTTCTGAGAGAAGGACTTCCCACATATCTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGATGACAAAATGGGACTTCTGAGAGAAGGACTTCCCACATATCTCA  200

seq1  CACTCGTATGGCTTCTCTCCCGTGTGAGTCCTTTCGTGTAATCTAAGGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCGTATGGCTTCTCTCCCGTGTGAGTCCTTTCGTGTAATCTAAGGAC  250

seq1  TGAGTTCACAGAGAAAGATTTGCCACACTCTGCACATTCGTACGGCTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTCACAGAGAAAGATTTGCCACACTCTGCACATTCGTACGGCTTCT  300

seq1  CCCCTGTATGCTTTCTCTCGTGTTTGGTGAGATCTGACTTATAGTAAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGTATGCTTTCTCTCGTGTTTGGTGAGATCTGACTTATAGTAAAAG  350

seq1  TGTTTCCCACACTTACTGCATTCGAAAGGTTTCTCCCCGGTGTGAGTTCG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCCCACACTTACTGCATTCGAAAGGTTTCTCCCCGGTGTGAGTTCG  400

seq1  CTGGTGCACGGTGAGGGCTGACTTCTGGTAGAAGCAGTTTCCGCACTCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGCACGGTGAGGGCTGACTTCTGGTAGAAGCAGTTTCCGCACTCCT  450

seq1  TACATTTGTAGGGTTTCTCCCCTGTGTGGGTTCTCTGATGGGTTTTGAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTGTAGGGTTTCTCCCCTGTGTGGGTTCTCTGATGGGTTTTGAGG  500

seq1  TGTGAATTCCTAGAGAAGAGTTTCCCGCACTCCTTACATTTGTAGGGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAATTCCTAGAGAAGAGTTTCCCGCACTCCTTACATTTGTAGGGTTT  550

seq1  CTCCCCTGTGTGTGTTCTCTGATGTACTGTGAGGTGTGATTTTTGTGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCTGTGTGTGTTCTCTGATGTACTGTGAGGTGTGATTTTTGTGAAA  600

seq1  AGAACTTCCCACATTCCTTACACTGAAAAGGCTTCTCGCCTGTGTGTGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTTCCCACATTCCTTACACTGAAAAGGCTTCTCGCCTGTGTGTGTT  650

seq1  TTCTGGTGCACCAGGAGGTATGCCTTCACATAGAAGAACTTCCCACACTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGTGCACCAGGAGGTATGCCTTCACATAGAAGAACTTCCCACACTC  700

seq1  CTTACACTCAAATGGCTTCTCCCCTGTGTGTGTTTTCTGGTGCTCTGTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACACTCAAATGGCTTCTCCCCTGTGTGTGTTTTCTGGTGCTCTGTGA  750

seq1  GGTGT-GGCTTCTGATAGAAGGATTTATCACACTGGCTACATTCGTAGGG  799
      ||||| |||||||||||||| | |||||||||||||||||||||||||||
seq2  GGTGTGGGCTTCTGATAGAAAGGTTTATCACACTGGCTACATTCGTAGGG  800

seq1  TTTCTCCCCAGCGTGGATCCTCAGATGTCTAGTGAGAGACGACAGGTGAT  849
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -TTCTCCCCAGCGTGGATCCTCAGATGTCTAGTGAGAGACGACAGGTGAT  849

seq1  AGAAAATTTTGTTACATTCTTT-ACATGGGTATGTTTTATCTCTGGTATG  898
      || ||||||||||||||||||| ||||||| |||||||||||||||||||
seq2  AG-AAATTTTGTTACATTCTTTAACATGGGGATGTTTTATCTCTGGTATG  898

seq1  GACTTTCTGATGGATTGTGAGGTCTTCGTTCTTATAGAAAGCTTGTCCAC  948
      ||||||||||||||||||||||||||||||| |||| |||||||||||||
seq2  GACTTTCTGATGGATTGTGAGGTCTTCGTTC-TATAAAAAGCTTGTCCAC  947

seq1  ATTTCTCACATTTATAGGACTTCTTGGTGTGTGTTTC-CTGGTGCGCCAG  997
      | ||||||| ||||||||||||||||||||||||||| | |||  |||||
seq2  A-TTCTCAC-TTTATAGGACTTCTTGGTGTGTGTTTCTCGGGTCGGCCAG  995

seq1  TAGGGAAGACTTCTGGCAGAAAGATTTTCCACATTC  1033
      || |||| | |||||||  ||||||||||| |||||
seq2  TATGGAA-AATTCTGGCGAAAAGATTTTCC-CATTC  1029