BAC Information

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BAC

Clone NameB6Ng01-066O18
Chromosome6 (Build37)
Map Location 129,182,904 - 129,321,561
singlet/doubletdoublet
Overlap geneCd69, 4922502D21Rik, Clec12a
Upstream geneTead4, LOC652986, Tulp3, 5930416I19Rik, Foxm1, Nrip2, Itfg2, Fkbp4, EG667598, Pzp, LOC384494, EG667610, BC048546, Klrb1a, EG545878, LOC677440, Clec2h, LOC100043863, LOC100043861, Klrb1c, LOC100043862, Klrb1d, LOC667706, Clec2i, Clec2g, LOC667715, BC064078, Clec2f, Klrb1f, Clec2e, Klrb1-ps1, Clec2d
Downstream gene4933425B16Rik, Clec1b, Clec9a, Clec1a, Clec7a, Olr1, D630042F21Rik, Gabarapl1, Klre1, Klrd1, Klrk1, Klrc3, Klrc2, Klrc1, LOC640755, Klri1, Klri2, Gm156, Klra17, Klra5, LOC667764, Klra6, LOC100038893, LOC100038894, LOC100038895, Klra4, LOC667769, LOC100038897, Klra8, EG654449, Klra9, Klra7, LOC100038898, Klra12, Klra10, Klra13, Klra3, Klra1, LOC100038902, LOC100038903
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-066O18.bB6Ng01-066O18.g
ACCDH885963DH885964
length1,137947
definitionDH885963|Mus musculus domesticus DNA, BAC clone: B6Ng01-066O18, 5' end.DH885964|Mus musculus domesticus DNA, BAC clone: B6Ng01-066O18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(129,182,904 - 129,184,059)(129,320,936 - 129,321,561)
sequence
gaattcagctgccacaggaggaagtgtctctgatcacaggactataagca
gaactgcaaagcctgcagcataggacagatttgcaagacagctcatcagg
aagctgtgctaacacgcattttgttagtcaaatatgggcagaggcgtatc
taggcggtttttactggaaagtaccgaccttaagcagaaatcaggaacta
acagccgcaagtattggcagcagtgtctggaacgttaagccagggctgtt
taaccatgtcaggtggtcctacatcaatgacaattaaggtcgtgttggtt
atgtctagttgttttcatatttctttataaggtattatttttttccattt
tttattaggtatttagctcatttacatttccaatgctataccaaaagtcc
cccatacccacccacccccactcccctacccacccactccccctttttgg
ccctggcgttcccctttttataaggtattattatttgctactttttgttt
tgttatagaagaggataacataactgccaaataaaattgcccttgtaatg
aaatcagcaccatggccatcttcagccctgtattagagtcatgaatttgg
accacaggttgttacagcagcagcatatttttctaagtatatacctaaaa
tttattctttgaacatgtcatatataagacacaatgtagtgtattccctc
caactctcctatttctgtctcttatgccttgccagttgcccattttcctc
agaactgcacctctgaagaccctcctcctggcgccactgctgttgttagt
tcctcagctagaggtgggacctcgggtatccctctcccatccaatcccca
ggtttttcctcaattacgtttgatttcccctcccccagacaccttagcag
ctttctctatattttgatctctggaggacaaagttgatctcagtcaccct
ctgctgacacatgcagtgttctggagcagaccccaatgaggggcacttca
caacctgtgaagagtgtcgaagtattgtacttctggccctggctcgtccc
atcttcacacaccctagttccacctggaaacaattatttctggttcccat
ttacacaaattatcaacatagcatttcccgatctgtc
gaattcaaagctgtgtgggaagggaaaagagagtgaagaagtgggctatg
agaagagttgtggcaggggtgaatatgttcaaatagtgttagacaaaaaa
ttaatgaaaatatcatgtttaaaaaagagaagactgggataggagggtca
ctaagagtttgagaccagcctagcctgggctatatagaaaatctaaagca
attcttagcaacatagtgaagccctatcttacaactaataaatgaataaa
tgagaaaatatatacacagaatgaaatattattcaaccataaaaatgaat
ggaattttgacatttgtaatgagtgaaacatgagtattatgttaacatga
atgaaaccagagtatcatgttaaatgaaatttgttatgttaaattaatca
ggtatagatgtcacaagtgccatgtgttctcatttacatgtgaaagctaa
aacatcatctgatataagtagagagaagagaactgatttccagagcctgg
gatggcagtagaagaatagagatgaacttaggtacttagtgcagtttagt
ggaaaacataactgctaatactcaatagcacatgacataactatggttgg
caacgaattctataattaaaacatctagtagagccgggtgtggtggtgca
ctcctttaatcccagcactcgggaggcagaggcaggtggatttctgagtt
tgaggccagcctggtctacaaagtgagttccaggagagccgggtctacac
agagaaagcctgtcttgaaaaaccgaaaacaaaacaaaacaaaacaaaaa
tctagtagagattttggatgttcttaacataaatcagtgatagataatga
agtgatgaatgtgacaactgtttgtcaggtcattaaacagaaatgtcaca
ctgtcccccacagatgtgtgcagccccgcagcctttgagtcaacagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_129182904_129184059
seq2: B6Ng01-066O18.b_45_1181

seq1  GAATTCAGCTGCCACAGGAGGAAGTGTCTCTGATCACAGGACTATAAGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCTGCCACAGGAGGAAGTGTCTCTGATCACAGGACTATAAGCA  50

seq1  GAACTGCAAAGCCTGCAGCATAGGACAGATTTGCAAGACAGCTCATCAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGCAAAGCCTGCAGCATAGGACAGATTTGCAAGACAGCTCATCAGG  100

seq1  AAGCTGTGCTAACACGCATTTTGTTAGTCAAATATGGGCAGAGGCGTATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGTGCTAACACGCATTTTGTTAGTCAAATATGGGCAGAGGCGTATC  150

seq1  TAGGCGGTTTTTACTGGAAAGTACCGACCTTAAGCAGAAATCAGGAACTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCGGTTTTTACTGGAAAGTACCGACCTTAAGCAGAAATCAGGAACTA  200

seq1  ACAGCCGCAAGTATTGGCAGCAGTGTCTGGAACGTTAAGCCAGGGCTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCGCAAGTATTGGCAGCAGTGTCTGGAACGTTAAGCCAGGGCTGTT  250

seq1  TAACCATGTCAGGTGGTCCTACATCAATGACAATTAAGGTCGTGTTGGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCATGTCAGGTGGTCCTACATCAATGACAATTAAGGTCGTGTTGGTT  300

seq1  ATGTCTAGTTGTTTTCATATTTCTTTATAAGGTATTATTTTTTTCCATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTAGTTGTTTTCATATTTCTTTATAAGGTATTATTTTTTTCCATTT  350

seq1  TTTATTAGGTATTTAGCTCATTTACATTTCCAATGCTATACCAAAAGTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTAGGTATTTAGCTCATTTACATTTCCAATGCTATACCAAAAGTCC  400

seq1  CCCATACCCACCCACCCCCACTCCCCTACCCACCCACTCCCCCTTTTTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATACCCACCCACCCCCACTCCCCTACCCACCCACTCCCCCTTTTTGG  450

seq1  CCCTGGCGTTCCCCTTTTTATAAGGTATTATTATTTGCTACTTTTTGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGCGTTCCCCTTTTTATAAGGTATTATTATTTGCTACTTTTTGTTT  500

seq1  TGTTATAGAAGAGGATAACATAACTGCCAAATAAAATTGCCCTTGTAATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATAGAAGAGGATAACATAACTGCCAAATAAAATTGCCCTTGTAATG  550

seq1  AAATCAGCACCATGGCCATCTTCAGCCCTGTATTAGAGTCATGAATTTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAGCACCATGGCCATCTTCAGCCCTGTATTAGAGTCATGAATTTGG  600

seq1  ACCACAGGTTGTTACAGCAGCAGCATATTTTTCTAAGTATATACCTAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACAGGTTGTTACAGCAGCAGCATATTTTTCTAAGTATATACCTAAAA  650

seq1  TTTATTCTTTGAACATGTCATATATAAGACACAATGTAGTGTATTCCCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCTTTGAACATGTCATATATAAGACACAATGTAGTGTATTCCCTC  700

seq1  CAACTCTCCTATTTCTGTCTCTTATGCCTTGCCAGTTGCCCATTTTCCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCTCCTATTTCTGTCTCTTATGCCTTGCCAGTTGCCCATTTTCCTC  750

seq1  AGAACTGCACCTCTGAAGACCCTCCTCCTGGCGCCACTGCTGTTGTTAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTGCACCTCTGAAGACCCTCCTCCTGGCGCCACTGCTGTTGTTAGT  800

seq1  TCCTCAGCTAGAGGTGGGACCTCGGGTATCCCTCTCCCATCCAATCCCCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCAGCTAGAGGTGGGACCTCGGGTATCCCTCTCCCATCCAATCCCCA  850

seq1  GGTTTTTCCTCAATTACGTTTGATTTCCCCTCCCCCAGACACCTTAGCAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTTCCTCAATTACGTTTGATTTCCCCTCCCCCAGACACCTTAGCAG  900

seq1  CTTTCTCTATATTTTGATCTCTGAAGGACAAAGTTGATCTCCAGTCACCC  950
      ||||||||||||||||||||||| |||||||||||||||| |||||||||
seq2  CTTTCTCTATATTTTGATCTCTGGAGGACAAAGTTGATCT-CAGTCACCC  949

seq1  TCTGCTGACCACATGCAAGTGTTCT-GAGCAGACCCCCAATGAGGCGCAC  999
      |||||||| ||||||| |||||||| ||||||| ||||||||||| ||| 
seq2  TCTGCTGA-CACATGC-AGTGTTCTGGAGCAGA-CCCCAATGAGGGGCA-  995

seq1  CTTCAACAAACCTGTGAAGAGTGTCAGAAGTAATTGTACCTCTGGTCTCT  1049
      |||||   ||||||||||||||||| ||||| ||||||| ||||| | ||
seq2  CTTCA--CAACCTGTGAAGAGTGTC-GAAGT-ATTGTACTTCTGG-CCCT  1040

seq1  GGCTTCGTTCCCATCCTCGACACACCCGAGTTCCCACCTTGGAACCCATT  1099
      ||| ||| ||||||| || |||||||| |||| ||||| ||||| | |||
seq2  GGC-TCG-TCCCATCTTC-ACACACCCTAGTT-CCACC-TGGAAACAATT  1085

seq1  ATTCTCTGGGTCCCCCTTTTCACCAAAATTACAAACATTAGCATTTCCCC  1149
      ||| ||| ||| ||| ||| |||  ||||||  |||| ||||||||||| 
seq2  ATT-TCT-GGTTCCCATTTACAC--AAATTATCAACA-TAGCATTTCCCG  1130

seq1  ATCTGTC  1156
      |||||||
seq2  ATCTGTC  1137

seq1: chr6_129320936_129321561
seq2: B6Ng01-066O18.g_69_694 (reverse)

seq1  AGATGTTTTAATTATAGAATTCGTTGCCAACCATAGTTATGTCATGTGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTTTTAATTATAGAATTCGTTGCCAACCATAGTTATGTCATGTGCT  50

seq1  ATTGAGTATTAGCAGTTATGTTTTCCACTAAACTGCACTAAGTACCTAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGTATTAGCAGTTATGTTTTCCACTAAACTGCACTAAGTACCTAAG  100

seq1  TTCATCTCTATTCTTCTACTGCCATCCCAGGCTCTGGAAATCAGTTCTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCTCTATTCTTCTACTGCCATCCCAGGCTCTGGAAATCAGTTCTCT  150

seq1  TCTCTCTACTTATATCAGATGATGTTTTAGCTTTCACATGTAAATGAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTACTTATATCAGATGATGTTTTAGCTTTCACATGTAAATGAGAA  200

seq1  CACATGGCACTTGTGACATCTATACCTGATTAATTTAACATAACAAATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGGCACTTGTGACATCTATACCTGATTAATTTAACATAACAAATTT  250

seq1  CATTTAACATGATACTCTGGTTTCATTCATGTTAACATAATACTCATGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAACATGATACTCTGGTTTCATTCATGTTAACATAATACTCATGTT  300

seq1  TCACTCATTACAAATGTCAAAATTCCATTCATTTTTATGGTTGAATAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCATTACAAATGTCAAAATTCCATTCATTTTTATGGTTGAATAATA  350

seq1  TTTCATTCTGTGTATATATTTTCTCATTTATTCATTTATTAGTTGTAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATTCTGTGTATATATTTTCTCATTTATTCATTTATTAGTTGTAAGA  400

seq1  TAGGGCTTCACTATGTTGCTAAGAATTGCTTTAGATTTTCTATATAGCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGCTTCACTATGTTGCTAAGAATTGCTTTAGATTTTCTATATAGCCC  450

seq1  AGGCTAGGCTGGTCTCAAACTCTTAGTGACCCTCCTATCCCAGTCTTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTAGGCTGGTCTCAAACTCTTAGTGACCCTCCTATCCCAGTCTTCTC  500

seq1  TTTTTTAAACATGATATTTTCATTAATTTTTTGTCTAACACTATTTGAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAAACATGATATTTTCATTAATTTTTTGTCTAACACTATTTGAAC  550

seq1  ATATTCACCCCTGCCACAACTCTTCTCATAGCCCACTTCTTCACTCTCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCACCCCTGCCACAACTCTTCTCATAGCCCACTTCTTCACTCTCTT  600

seq1  TTCCCTTCCCACACAGCTTTGAATTC  626
      ||||||||||||||||||||||||||
seq2  TTCCCTTCCCACACAGCTTTGAATTC  626